RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 C6orf99Q4VX62 202 aa11.35□□□□□ -0.59
SYNE2-201ENST00000341472 Q8N377 158 aa11.35□□□□□ -0.59
SYNE2-201ENST00000341472 SPRR1BP22528 89 aa11.34□□□□□ -0.59
SYNE2-201ENST00000341472 TRBV7-6A0A0J9YX20 115 aa11.33□□□□□ -0.6
SYNE2-201ENST00000341472 VAMP3Q15836 100 aa11.33□□□□□ -0.6
SYNE2-201ENST00000341472 ELOF1P60002 83 aaKnown RBP11.32□□□□□ -0.6
SYNE2-201ENST00000341472 LAMTOR3Q9UHA4 124 aa11.31□□□□□ -0.6
SYNE2-201ENST00000341472 FAT4Q6V0I7 4981 aa11.31□□□□□ -0.6
SYNE2-201ENST00000341472 COL5A1-AS1Q5SY13 56 aa11.3□□□□□ -0.6
SYNE2-201ENST00000341472 COX6CP09669 75 aa11.29□□□□□ -0.6
SYNE2-201ENST00000341472 PSMB2P49721 201 aa11.29□□□□□ -0.6
SYNE2-201ENST00000341472 DEFB105AQ8NG35 78 aa11.28□□□□□ -0.6
SYNE2-201ENST00000341472 H0YGX0 51 aa11.27□□□□□ -0.61
SYNE2-201ENST00000341472 TEX49A0A1B0GTD5 131 aa11.24□□□□□ -0.61
SYNE2-201ENST00000341472 TAX1BP3O14907 124 aa11.24□□□□□ -0.61
SYNE2-201ENST00000341472 TRIAP1O43715 76 aa11.24□□□□□ -0.61
SYNE2-201ENST00000341472 C9orf118A6NHY6 69 aa11.23□□□□□ -0.61
SYNE2-201ENST00000341472 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
SYNE2-201ENST00000341472 HRCT1Q6UXD1 115 aa11.23□□□□□ -0.61
SYNE2-201ENST00000341472 SNCGO76070 127 aa11.22□□□□□ -0.61
SYNE2-201ENST00000341472 SCGB1C2P0DMR2 95 aa11.22□□□□□ -0.61
SYNE2-201ENST00000341472 LYRM7Q5U5X0 104 aa11.21□□□□□ -0.61
SYNE2-201ENST00000341472 SEC61BP60468 96 aaKnown RBP11.2□□□□□ -0.62
SYNE2-201ENST00000341472 LIMD2Q9BT23 127 aa11.2□□□□□ -0.62
SYNE2-201ENST00000341472 H3BUT2 72 aa11.19□□□□□ -0.62
SYNE2-201ENST00000341472 LINC00575Q6W349 94 aa11.19□□□□□ -0.62
SYNE2-201ENST00000341472 A0A1B0GX51 115 aa11.18□□□□□ -0.62
SYNE2-201ENST00000341472 NAA38Q9BRA0 125 aaKnown RBP11.17□□□□□ -0.62
SYNE2-201ENST00000341472 hADV29S1A0JD25 119 aa11.16□□□□□ -0.62
SYNE2-201ENST00000341472 CD164Q04900 197 aa11.16□□□□□ -0.62
SYNE2-201ENST00000341472 SMIM29Q86T20 159 aa11.16□□□□□ -0.62
SYNE2-201ENST00000341472 IGLV5-48A0A075B6I7 105 aa11.15□□□□□ -0.62
SYNE2-201ENST00000341472 LINC01547P58512 204 aaPredicted RBP11.15□□□□□ -0.62
SYNE2-201ENST00000341472 LCE2AQ5TA79 106 aaPredicted RBP11.15□□□□□ -0.62
SYNE2-201ENST00000341472 A0A1W2PPM0 123 aa11.14□□□□□ -0.63
SYNE2-201ENST00000341472 FABP2P12104 132 aa11.14□□□□□ -0.63
SYNE2-201ENST00000341472 TRBV20-1A0A075B6N2 111 aa11.13□□□□□ -0.63
SYNE2-201ENST00000341472 XP32Q5T750 250 aa11.13□□□□□ -0.63
SYNE2-201ENST00000341472 CLEC2BQ92478 149 aa11.13□□□□□ -0.63
SYNE2-201ENST00000341472 FAM218AQ96MZ4 157 aa11.11□□□□□ -0.63
SYNE2-201ENST00000341472 ATXN8Q156A1 80 aa11.1□□□□□ -0.63
SYNE2-201ENST00000341472 LST1O00453 97 aa11.09□□□□□ -0.63
SYNE2-201ENST00000341472 GHRHP01286 108 aa11.09□□□□□ -0.63
SYNE2-201ENST00000341472 TRACP01848 142 aa11.09□□□□□ -0.63
SYNE2-201ENST00000341472 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.09□□□□□ -0.63
SYNE2-201ENST00000341472 DNAL4O96015 105 aa11.08□□□□□ -0.64
SYNE2-201ENST00000341472 TCL1BO95988 128 aa11.07□□□□□ -0.64
SYNE2-201ENST00000341472 OCIAD2Q56VL3 154 aa11.07□□□□□ -0.64
SYNE2-201ENST00000341472 KRTAP4-1Q9BYQ7 146 aa11.07□□□□□ -0.64
SYNE2-201ENST00000341472 A0A0G2JQZ4 141 aa11.06□□□□□ -0.64
SYNE2-201ENST00000341472 Q5XG85 94 aa11.06□□□□□ -0.64
SYNE2-201ENST00000341472 Q6ZQY7 126 aa11.06□□□□□ -0.64
SYNE2-201ENST00000341472 H3BQ85 93 aa11.05□□□□□ -0.64
SYNE2-201ENST00000341472 SPCS1Q9Y6A9 102 aa11.04□□□□□ -0.64
SYNE2-201ENST00000341472 C9orf92A6NGG3 77 aa11.03□□□□□ -0.64
SYNE2-201ENST00000341472 PPDPFLQ8WWR9 84 aa11.03□□□□□ -0.64
SYNE2-201ENST00000341472 F8WEM9 126 aa11.01□□□□□ -0.65
SYNE2-201ENST00000341472 C1orf195Q5TG92 126 aa11.01□□□□□ -0.65
SYNE2-201ENST00000341472 ORMDL1Q9P0S3 153 aa11.01□□□□□ -0.65
SYNE2-201ENST00000341472 GTF2H5Q6ZYL4 71 aa10.99□□□□□ -0.65
SYNE2-201ENST00000341472 K7EP34 96 aa10.98□□□□□ -0.65
SYNE2-201ENST00000341472 TMEM256-PLSCR3K7ERE1 68 aa10.97□□□□□ -0.65
SYNE2-201ENST00000341472 H3BMG7 143 aa10.96□□□□□ -0.65
SYNE2-201ENST00000341472 PCOTHQ58A44 107 aa10.95□□□□□ -0.66
SYNE2-201ENST00000341472 C9JAW5 83 aa10.94□□□□□ -0.66
SYNE2-201ENST00000341472 BAALC-AS2P0C853 105 aa10.94□□□□□ -0.66
SYNE2-201ENST00000341472 Q6JHZ5 121 aa10.94□□□□□ -0.66
SYNE2-201ENST00000341472 KRTAP9-2Q9BYQ4 174 aa10.94□□□□□ -0.66
SYNE2-201ENST00000341472 IGLV8-61A0A075B6I0 122 aa10.91□□□□□ -0.66
SYNE2-201ENST00000341472 UBE2V1Q13404 147 aa10.91□□□□□ -0.66
SYNE2-201ENST00000341472 H3BT86 120 aa10.9□□□□□ -0.66
SYNE2-201ENST00000341472 A0A1B0GV90 55 aa10.88□□□□□ -0.67
SYNE2-201ENST00000341472 NDUFV3P56181 108 aaKnown RBP10.88□□□□□ -0.67
SYNE2-201ENST00000341472 IGFL1Q6UW32 110 aa10.88□□□□□ -0.67
SYNE2-201ENST00000341472 TRBV7-7A0A0K0K1E9 115 aa10.86□□□□□ -0.67
SYNE2-201ENST00000341472 ANKRD29Q8N6D5 301 aa10.85□□□□□ -0.67
SYNE2-201ENST00000341472 F8W1H4 67 aa10.84□□□□□ -0.67
SYNE2-201ENST00000341472 JMJD7-PLA2G4BH0Y9G9 81 aa10.81□□□□□ -0.68
SYNE2-201ENST00000341472 RPL37P61927 97 aaKnown RBP10.81□□□□□ -0.68
SYNE2-201ENST00000341472 MTURNQ8N3F0 131 aa10.81□□□□□ -0.68
SYNE2-201ENST00000341472 PRO0461Q9UI25 63 aa10.81□□□□□ -0.68
SYNE2-201ENST00000341472 LCE2CQ5TA81 110 aa10.8□□□□□ -0.68
SYNE2-201ENST00000341472 SMCPP49901 116 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-201ENST00000341472 RBM3P98179 157 aaKnown RBP10.77□□□□□ -0.69
SYNE2-201ENST00000341472 KRTAP19-2Q3LHN2 52 aa10.76□□□□□ -0.69
SYNE2-201ENST00000341472 DSCR8Q96T75 97 aa10.74□□□□□ -0.69
SYNE2-201ENST00000341472 OBSCN-AS1Q96MR7 158 aa10.73□□□□□ -0.69
SYNE2-201ENST00000341472 PDE6GP18545 87 aa10.72□□□□□ -0.69
SYNE2-201ENST00000341472 TRBV7-4A0A0J9YYF1 115 aa10.7□□□□□ -0.7
SYNE2-201ENST00000341472 A0A1B0GV72 72 aa10.7□□□□□ -0.7
SYNE2-201ENST00000341472 C21orf62-AS1Q17RA5 79 aa10.7□□□□□ -0.7
SYNE2-201ENST00000341472 Q6Q795 121 aa10.7□□□□□ -0.7
SYNE2-201ENST00000341472 TEN1Q86WV5 123 aa10.69□□□□□ -0.7
SYNE2-201ENST00000341472 SS18L2Q9UHA2 77 aa10.69□□□□□ -0.7
SYNE2-201ENST00000341472 LOC110117498A0A087WWA1 95 aa10.67□□□□□ -0.7
SYNE2-201ENST00000341472 MT1HP80294 61 aa10.67□□□□□ -0.7
SYNE2-201ENST00000341472 ETDBQ3ZM63 59 aa10.66□□□□□ -0.7
SYNE2-201ENST00000341472 C14orf132Q9NPU4 83 aa10.65□□□□□ -0.7
SYNE2-201ENST00000341472 ATP11AUNQ6ZP68 121 aa10.64□□□□□ -0.71
SYNE2-201ENST00000341472 Q75L30 129 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms