RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 DIRC1Q969H9 104 aa6.2□□□□□ -1.42
TPM3-207ENST00000341372 H7C2G1 150 aa6.18□□□□□ -1.42
TPM3-207ENST00000341372 ZNF861PO60384 105 aa6.18□□□□□ -1.42
TPM3-207ENST00000341372 BCE1O60756 84 aa6.18□□□□□ -1.42
TPM3-207ENST00000341372 IGLV1-50A0A075B6I6 118 aa6.17□□□□□ -1.42
TPM3-207ENST00000341372 KRTAP10-8P60410 259 aa6.17□□□□□ -1.42
TPM3-207ENST00000341372 SS18L2Q9UHA2 77 aa6.17□□□□□ -1.42
TPM3-207ENST00000341372 ZNF706Q9Y5V0 76 aaPredicted RBP6.17□□□□□ -1.42
TPM3-207ENST00000341372 FAM236DA0A1B0GTK5 79 aa6.16□□□□□ -1.42
TPM3-207ENST00000341372 H3BMG7 143 aa6.16□□□□□ -1.42
TPM3-207ENST00000341372 TCL1BO95988 128 aa6.16□□□□□ -1.42
TPM3-207ENST00000341372 FAM236CP0DP71 79 aa6.16□□□□□ -1.42
TPM3-207ENST00000341372 KRTAP13-1Q8IUC0 172 aa6.16□□□□□ -1.42
TPM3-207ENST00000341372 PRO0461Q9UI25 63 aa6.16□□□□□ -1.42
TPM3-207ENST00000341372 GTF2H5Q6ZYL4 71 aa6.16□□□□□ -1.42
TPM3-207ENST00000341372 ANAPC13Q9BS18 74 aa6.16□□□□□ -1.42
TPM3-207ENST00000341372 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.42
TPM3-207ENST00000341372 MP68P56378 58 aa6.15□□□□□ -1.42
TPM3-207ENST00000341372 COPS9Q8WXC6 57 aa6.15□□□□□ -1.42
TPM3-207ENST00000341372 M0R378 163 aa6.15□□□□□ -1.43
TPM3-207ENST00000341372 RPL28P46779 137 aaKnown RBP6.15□□□□□ -1.43
TPM3-207ENST00000341372 TMEM126AQ9H061 195 aa6.13□□□□□ -1.43
TPM3-207ENST00000341372 HMCN2Q8NDA2 5059 aa6.13□□□□□ -1.43
TPM3-207ENST00000341372 NDUFC2O95298 119 aa6.12□□□□□ -1.43
TPM3-207ENST00000341372 Q1RN00 199 aa6.12□□□□□ -1.43
TPM3-207ENST00000341372 TRAV13-2A0A0B4J235 113 aa6.11□□□□□ -1.43
TPM3-207ENST00000341372 TRBV10-2A0A0K0K1G8 114 aa6.11□□□□□ -1.43
TPM3-207ENST00000341372 CLEC2BQ92478 149 aa6.11□□□□□ -1.43
TPM3-207ENST00000341372 VPS25Q9BRG1 176 aa6.11□□□□□ -1.43
TPM3-207ENST00000341372 NCR3O14931 201 aa6.11□□□□□ -1.43
TPM3-207ENST00000341372 SCGB1C2P0DMR2 95 aa6.11□□□□□ -1.43
TPM3-207ENST00000341372 UBE2AP49459 152 aa6.11□□□□□ -1.43
TPM3-207ENST00000341372 OR13C6PQ8NH95 151 aa6.11□□□□□ -1.43
TPM3-207ENST00000341372 SMIM11BQ8TCY0 68 aa6.11□□□□□ -1.43
TPM3-207ENST00000341372 TRBV20-1A0A075B6N2 111 aa6.1□□□□□ -1.43
TPM3-207ENST00000341372 SPRR1AP35321 89 aa6.1□□□□□ -1.43
TPM3-207ENST00000341372 KCNQ1DNQ9H478 68 aa6.1□□□□□ -1.43
TPM3-207ENST00000341372 TRBV10-3A0A0K0K1G6 114 aa6.09□□□□□ -1.43
TPM3-207ENST00000341372 PRLHP81277 87 aa6.09□□□□□ -1.43
TPM3-207ENST00000341372 F8W1H4 67 aa6.08□□□□□ -1.44
TPM3-207ENST00000341372 LST1O00453 97 aa6.08□□□□□ -1.44
TPM3-207ENST00000341372 LYRM7Q5U5X0 104 aa6.08□□□□□ -1.44
TPM3-207ENST00000341372 CAMK2N1Q7Z7J9 78 aa6.08□□□□□ -1.44
TPM3-207ENST00000341372 IGLV6-57P01721 117 aa6.07□□□□□ -1.44
TPM3-207ENST00000341372 SCGB1A1P11684 91 aa6.06□□□□□ -1.44
TPM3-207ENST00000341372 ATXN8Q156A1 80 aa6.06□□□□□ -1.44
TPM3-207ENST00000341372 C9JAW5 83 aa6.05□□□□□ -1.44
TPM3-207ENST00000341372 COX6CP09669 75 aa6.05□□□□□ -1.44
TPM3-207ENST00000341372 ETDBQ3ZM63 59 aa6.05□□□□□ -1.44
TPM3-207ENST00000341372 FAM229BQ4G0N7 80 aa6.05□□□□□ -1.44
TPM3-207ENST00000341372 KRTAP16-1A8MUX0 517 aa6.04□□□□□ -1.44
TPM3-207ENST00000341372 SLC25A20O43772 301 aa6.04□□□□□ -1.44
TPM3-207ENST00000341372 OCIAD2Q56VL3 154 aa6.04□□□□□ -1.44
TPM3-207ENST00000341372 ETDCA0A1B0GVM5 59 aa6.03□□□□□ -1.44
TPM3-207ENST00000341372 CRYGAP11844 174 aa6.03□□□□□ -1.44
TPM3-207ENST00000341372 C8orf17Q9NRJ1 99 aa6.03□□□□□ -1.44
TPM3-207ENST00000341372 NDUFAF8A1L188 74 aa6.03□□□□□ -1.44
TPM3-207ENST00000341372 S100A7L2Q5SY68 101 aa6.03□□□□□ -1.44
TPM3-207ENST00000341372 HIGD2AQ9BW72 106 aa6.03□□□□□ -1.44
TPM3-207ENST00000341372 TRAV23DV6A0A075B6W5 121 aa6.02□□□□□ -1.45
TPM3-207ENST00000341372 LINC00313P59037 77 aa6.02□□□□□ -1.45
TPM3-207ENST00000341372 SMCR5Q8TEV8 140 aa6.02□□□□□ -1.45
TPM3-207ENST00000341372 TRACP01848 142 aa6.01□□□□□ -1.45
TPM3-207ENST00000341372 KRTAP13-2Q52LG2 175 aa6.01□□□□□ -1.45
TPM3-207ENST00000341372 ANKRD29Q8N6D5 301 aa6.01□□□□□ -1.45
TPM3-207ENST00000341372 SPRR4Q96PI1 79 aa6.01□□□□□ -1.45
TPM3-207ENST00000341372 ANAPC11Q9NYG5 84 aa6.01□□□□□ -1.45
TPM3-207ENST00000341372 H0YGX0 51 aa6.01□□□□□ -1.45
TPM3-207ENST00000341372 Q6ZRX8 168 aa6.01□□□□□ -1.45
TPM3-207ENST00000341372 ZNF73O43830 326 aaPredicted RBP6□□□□□ -1.45
TPM3-207ENST00000341372 TEN1Q86WV5 123 aa5.99□□□□□ -1.45
TPM3-207ENST00000341372 Q9BRP9 147 aa5.99□□□□□ -1.45
TPM3-207ENST00000341372 TYMSOSQ8TAI1 123 aa5.99□□□□□ -1.45
TPM3-207ENST00000341372 IGKV2D-30A0A075B6S6 120 aa5.98□□□□□ -1.45
TPM3-207ENST00000341372 H3BT86 120 aa5.98□□□□□ -1.45
TPM3-207ENST00000341372 LINC00483Q53H64 154 aa5.98□□□□□ -1.45
TPM3-207ENST00000341372 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
TPM3-207ENST00000341372 A0A1B0GVX0 72 aa5.97□□□□□ -1.45
TPM3-207ENST00000341372 ERC2-IT1O76042 136 aa5.97□□□□□ -1.45
TPM3-207ENST00000341372 LINC00575Q6W349 94 aa5.97□□□□□ -1.45
TPM3-207ENST00000341372 K7ERU9 68 aa5.96□□□□□ -1.45
TPM3-207ENST00000341372 BAALC-AS2P0C853 105 aa5.96□□□□□ -1.45
TPM3-207ENST00000341372 TEX49A0A1B0GTD5 131 aa5.96□□□□□ -1.46
TPM3-207ENST00000341372 C3orf22Q8N5N4 141 aa5.95□□□□□ -1.46
TPM3-207ENST00000341372 PPDPFLQ8WWR9 84 aa5.95□□□□□ -1.46
TPM3-207ENST00000341372 ELOF1P60002 83 aaKnown RBP5.94□□□□□ -1.46
TPM3-207ENST00000341372 LRP2P98164 4655 aa5.94□□□□□ -1.46
TPM3-207ENST00000341372 TRBV7-6A0A0J9YX20 115 aa5.94□□□□□ -1.46
TPM3-207ENST00000341372 A0A1B0GX51 115 aa5.94□□□□□ -1.46
TPM3-207ENST00000341372 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
TPM3-207ENST00000341372 UBR4Q5T4S7 5183 aa5.93□□□□□ -1.46
TPM3-207ENST00000341372 COX7BP24311 80 aa5.92□□□□□ -1.46
TPM3-207ENST00000341372 hADV29S1A0JD25 119 aa5.91□□□□□ -1.46
TPM3-207ENST00000341372 OBSCN-AS1Q96MR7 158 aa5.91□□□□□ -1.46
TPM3-207ENST00000341372 SPRR1BP22528 89 aa5.91□□□□□ -1.46
TPM3-207ENST00000341372 XP32Q5T750 250 aa5.91□□□□□ -1.46
TPM3-207ENST00000341372 DNAL4O96015 105 aa5.9□□□□□ -1.47
TPM3-207ENST00000341372 LUZP6Q538Z0 58 aa5.9□□□□□ -1.47
TPM3-207ENST00000341372 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
TPM3-207ENST00000341372 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms