RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 KCNQ1DNQ9H478 68 aa7.68□□□□□ -1.18
RTN3-203ENST00000341307 PRAC1Q96KF2 57 aa7.67□□□□□ -1.18
RTN3-203ENST00000341307 A0A0J9YWU9 116 aa7.66□□□□□ -1.18
RTN3-203ENST00000341307 LINC00313P59037 77 aa7.66□□□□□ -1.18
RTN3-203ENST00000341307 LINC00528Q8N1L1 170 aa7.66□□□□□ -1.18
RTN3-203ENST00000341307 REG3AQ06141 175 aa7.66□□□□□ -1.18
RTN3-203ENST00000341307 DNAH9Q9NYC9 4486 aa7.65□□□□□ -1.18
RTN3-203ENST00000341307 A0A1W2PNM2 257 aa7.65□□□□□ -1.18
RTN3-203ENST00000341307 CHCHD10Q8WYQ3 142 aaPredicted RBP7.64□□□□□ -1.19
RTN3-203ENST00000341307 XAGE1AQ9HD64 81 aa7.63□□□□□ -1.19
RTN3-203ENST00000341307 IGLV5-48A0A075B6I7 105 aa7.63□□□□□ -1.19
RTN3-203ENST00000341307 LELP1Q5T871 98 aa7.63□□□□□ -1.19
RTN3-203ENST00000341307 VPREB1P12018 145 aa7.62□□□□□ -1.19
RTN3-203ENST00000341307 MP68P56378 58 aa7.62□□□□□ -1.19
RTN3-203ENST00000341307 LINC01554Q52M75 96 aa7.62□□□□□ -1.19
RTN3-203ENST00000341307 COA5Q86WW8 74 aa7.61□□□□□ -1.19
RTN3-203ENST00000341307 WFDC10BQ8IUB3 73 aa7.61□□□□□ -1.19
RTN3-203ENST00000341307 PLAC8Q9NZF1 115 aa7.61□□□□□ -1.19
RTN3-203ENST00000341307 STAB2Q8WWQ8 2551 aa7.61□□□□□ -1.19
RTN3-203ENST00000341307 SPINK7P58062 85 aa7.61□□□□□ -1.19
RTN3-203ENST00000341307 DEFB116Q30KQ4 102 aa7.61□□□□□ -1.19
RTN3-203ENST00000341307 HUWE1Q7Z6Z7 4374 aaKnown RBP7.61□□□□□ -1.19
RTN3-203ENST00000341307 SPAG11BQ08648 103 aa7.6□□□□□ -1.19
RTN3-203ENST00000341307 Q8N377 158 aa7.6□□□□□ -1.19
RTN3-203ENST00000341307 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
RTN3-203ENST00000341307 A0A1B0GW54 56 aa7.59□□□□□ -1.19
RTN3-203ENST00000341307 DEFB131BA0A096LNP1 70 aa7.58□□□□□ -1.2
RTN3-203ENST00000341307 DEFB105AQ8NG35 78 aa7.58□□□□□ -1.2
RTN3-203ENST00000341307 LINC01558Q9Y6Z2 57 aa7.58□□□□□ -1.2
RTN3-203ENST00000341307 C9orf163Q8N9P6 203 aa7.57□□□□□ -1.2
RTN3-203ENST00000341307 WFDC13Q8IUB5 93 aa7.56□□□□□ -1.2
RTN3-203ENST00000341307 PRR34Q9NV39 138 aa7.56□□□□□ -1.2
RTN3-203ENST00000341307 Q8NBF4 154 aa7.56□□□□□ -1.2
RTN3-203ENST00000341307 C6orf48Q9UBA6 75 aa7.56□□□□□ -1.2
RTN3-203ENST00000341307 IGKV2D-24A0A075B6R9 120 aa7.55□□□□□ -1.2
RTN3-203ENST00000341307 H0Y9P7 68 aa7.55□□□□□ -1.2
RTN3-203ENST00000341307 H3BNG1 76 aa7.55□□□□□ -1.2
RTN3-203ENST00000341307 SPRR4Q96PI1 79 aa7.55□□□□□ -1.2
RTN3-203ENST00000341307 TNP2Q05952 138 aa7.54□□□□□ -1.2
RTN3-203ENST00000341307 SPAG11AQ6PDA7 123 aa7.54□□□□□ -1.2
RTN3-203ENST00000341307 GVQW2A0A096LPI5 108 aaPredicted RBP7.54□□□□□ -1.2
RTN3-203ENST00000341307 C1orf137Q5JT78 98 aa7.54□□□□□ -1.2
RTN3-203ENST00000341307 CASC2Q6XLA1 102 aa7.52□□□□□ -1.21
RTN3-203ENST00000341307 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
RTN3-203ENST00000341307 H3BPC8 53 aa7.52□□□□□ -1.21
RTN3-203ENST00000341307 PLA2G1BP04054 148 aaKnown RBP7.51□□□□□ -1.21
RTN3-203ENST00000341307 CNBPP62633 177 aaKnown RBP7.51□□□□□ -1.21
RTN3-203ENST00000341307 C7orf33Q8WU49 177 aa7.51□□□□□ -1.21
RTN3-203ENST00000341307 KRTAP29-1A8MX34 341 aaPredicted RBP7.5□□□□□ -1.21
RTN3-203ENST00000341307 TENM2Q9NT68 2774 aa7.5□□□□□ -1.21
RTN3-203ENST00000341307 IGLV7-46A0A075B6I9 117 aa7.5□□□□□ -1.21
RTN3-203ENST00000341307 SERTAD4-AS1Q5TG53 156 aa7.48□□□□□ -1.21
RTN3-203ENST00000341307 KRTAP26-1Q6PEX3 210 aa7.48□□□□□ -1.21
RTN3-203ENST00000341307 STARD9Q9P2P6 4700 aa7.46□□□□□ -1.22
RTN3-203ENST00000341307 LINC01556Q5JQF7 62 aa7.45□□□□□ -1.22
RTN3-203ENST00000341307 LYSTQ99698 3801 aa7.45□□□□□ -1.22
RTN3-203ENST00000341307 IGLV1-50A0A075B6I6 118 aa7.45□□□□□ -1.22
RTN3-203ENST00000341307 J3QL48 77 aa7.45□□□□□ -1.22
RTN3-203ENST00000341307 C15orf56Q8N910 161 aa7.44□□□□□ -1.22
RTN3-203ENST00000341307 RPL37AP61513 92 aaKnown RBP7.43□□□□□ -1.22
RTN3-203ENST00000341307 CAMK2N2Q96S95 79 aa7.43□□□□□ -1.22
RTN3-203ENST00000341307 IGLV5-37A0A075B6J1 123 aa7.42□□□□□ -1.22
RTN3-203ENST00000341307 A0A0G2JQZ4 141 aa7.42□□□□□ -1.22
RTN3-203ENST00000341307 A0A1W2PNN7 141 aa7.42□□□□□ -1.22
RTN3-203ENST00000341307 DNAH10OSP0CZ25 163 aa7.42□□□□□ -1.22
RTN3-203ENST00000341307 KMT2CQ8NEZ4 4911 aaKnown RBP7.42□□□□□ -1.22
RTN3-203ENST00000341307 LINC00476Q8WZB0 136 aa7.41□□□□□ -1.22
RTN3-203ENST00000341307 DNAH7Q8WXX0 4024 aa7.41□□□□□ -1.22
RTN3-203ENST00000341307 CASC10Q5T4H9 136 aa7.41□□□□□ -1.22
RTN3-203ENST00000341307 RTL8CO15255 209 aa7.4□□□□□ -1.22
RTN3-203ENST00000341307 ASB16-AS1Q495Z4 193 aa7.39□□□□□ -1.23
RTN3-203ENST00000341307 PLECQ15149 4684 aaKnown RBP7.39□□□□□ -1.23
RTN3-203ENST00000341307 PCOTHQ58A44 107 aa7.39□□□□□ -1.23
RTN3-203ENST00000341307 Q6ZRX8 168 aa7.38□□□□□ -1.23
RTN3-203ENST00000341307 DHRS4-AS1Q9P1J3 65 aa7.38□□□□□ -1.23
RTN3-203ENST00000341307 HRES1P13985 223 aa7.37□□□□□ -1.23
RTN3-203ENST00000341307 KRTAP4-16G5E9R7 235 aaPredicted RBP7.36□□□□□ -1.23
RTN3-203ENST00000341307 DNAH1Q9P2D7 4330 aa7.36□□□□□ -1.23
RTN3-203ENST00000341307 RETNLBQ9BQ08 111 aa7.36□□□□□ -1.23
RTN3-203ENST00000341307 IGFL1Q6UW32 110 aa7.34□□□□□ -1.23
RTN3-203ENST00000341307 WWC2-AS2Q96NR7 200 aa7.34□□□□□ -1.23
RTN3-203ENST00000341307 KRTAP1-5Q9BYS1 174 aa7.34□□□□□ -1.23
RTN3-203ENST00000341307 A0A087WSZ3 146 aa7.33□□□□□ -1.24
RTN3-203ENST00000341307 A0A087X002 238 aa7.33□□□□□ -1.24
RTN3-203ENST00000341307 CSAG1Q6PB30 78 aa7.32□□□□□ -1.24
RTN3-203ENST00000341307 Q6ZR54 194 aa7.32□□□□□ -1.24
RTN3-203ENST00000341307 DNAH10Q8IVF4 4471 aa7.32□□□□□ -1.24
RTN3-203ENST00000341307 HYDINQ4G0P3 5121 aa7.32□□□□□ -1.24
RTN3-203ENST00000341307 RYR3Q15413 4870 aa7.3□□□□□ -1.24
RTN3-203ENST00000341307 RPL37AP8A6NKH3 93 aa7.3□□□□□ -1.24
RTN3-203ENST00000341307 APLNQ9ULZ1 77 aa7.3□□□□□ -1.24
RTN3-203ENST00000341307 SPRR1AP35321 89 aa7.29□□□□□ -1.24
RTN3-203ENST00000341307 UBE2DNLQ8IWF7 75 aa7.29□□□□□ -1.24
RTN3-203ENST00000341307 ALMS1Q8TCU4 4167 aa7.29□□□□□ -1.24
RTN3-203ENST00000341307 FAM168BA1KXE4 195 aa7.28□□□□□ -1.24
RTN3-203ENST00000341307 A8MWP4 228 aa7.27□□□□□ -1.25
RTN3-203ENST00000341307 ZNF706Q9Y5V0 76 aaPredicted RBP7.27□□□□□ -1.25
RTN3-203ENST00000341307 MMP24-AS1A0A0U1RRL7 71 aa7.26□□□□□ -1.25
RTN3-203ENST00000341307 SACSQ9NZJ4 4579 aa7.25□□□□□ -1.25
RTN3-203ENST00000341307 KMT2AQ03164 3969 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms