RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 C9orf92A6NGG3 77 aa8.23□□□□□ -1.09
VSTM4-202ENST00000332853 C8orf87E5RJ46 101 aa8.22□□□□□ -1.09
VSTM4-202ENST00000332853 IGLV8-61A0A075B6I0 122 aa8.21□□□□□ -1.09
VSTM4-202ENST00000332853 GCN1Q92616 2671 aaKnown RBP8.2□□□□□ -1.1
VSTM4-202ENST00000332853 IGLV5-48A0A075B6I7 105 aa8.2□□□□□ -1.1
VSTM4-202ENST00000332853 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
VSTM4-202ENST00000332853 LOC101927531A0A1B0GV80 90 aa8.2□□□□□ -1.1
VSTM4-202ENST00000332853 SSBP3-AS1Q7Z2R9 100 aa8.19□□□□□ -1.1
VSTM4-202ENST00000332853 KLKP1Q107X0 134 aa8.18□□□□□ -1.1
VSTM4-202ENST00000332853 COA5Q86WW8 74 aa8.18□□□□□ -1.1
VSTM4-202ENST00000332853 H7BZZ5 65 aa8.17□□□□□ -1.1
VSTM4-202ENST00000332853 LINC01600Q96MT4 127 aa8.17□□□□□ -1.1
VSTM4-202ENST00000332853 J3QL48 77 aa8.17□□□□□ -1.1
VSTM4-202ENST00000332853 NBEAL2Q6ZNJ1 2754 aa8.16□□□□□ -1.1
VSTM4-202ENST00000332853 TACC2O95359 2948 aa8.16□□□□□ -1.1
VSTM4-202ENST00000332853 SETXQ7Z333 2677 aaKnown RBP8.15□□□□□ -1.11
VSTM4-202ENST00000332853 ATP11AUNQ6ZP68 121 aa8.14□□□□□ -1.11
VSTM4-202ENST00000332853 KRTAP1-5Q9BYS1 174 aa8.14□□□□□ -1.11
VSTM4-202ENST00000332853 PRO0628Q9UI54 55 aa8.14□□□□□ -1.11
VSTM4-202ENST00000332853 DMDP11532 3685 aa8.13□□□□□ -1.11
VSTM4-202ENST00000332853 FLNCQ14315 2725 aa8.13□□□□□ -1.11
VSTM4-202ENST00000332853 UNC79Q9P2D8 2635 aa8.13□□□□□ -1.11
VSTM4-202ENST00000332853 A8MUN3 132 aa8.13□□□□□ -1.11
VSTM4-202ENST00000332853 ZZEF1O43149 2961 aa8.12□□□□□ -1.11
VSTM4-202ENST00000332853 KRTAP26-1Q6PEX3 210 aa8.1□□□□□ -1.11
VSTM4-202ENST00000332853 UTP20O75691 2785 aaKnown RBP8.1□□□□□ -1.11
VSTM4-202ENST00000332853 ASPMQ8IZT6 3477 aa8.1□□□□□ -1.11
VSTM4-202ENST00000332853 ITPR1Q14643 2758 aa8.09□□□□□ -1.11
VSTM4-202ENST00000332853 LINC00336Q6ZUF6 198 aa8.07□□□□□ -1.12
VSTM4-202ENST00000332853 ZFHX4Q86UP3 3567 aa8.06□□□□□ -1.12
VSTM4-202ENST00000332853 COX6B2Q6YFQ2 88 aa8.06□□□□□ -1.12
VSTM4-202ENST00000332853 OCR1Q9BZK8 76 aa8.05□□□□□ -1.12
VSTM4-202ENST00000332853 LAMA5O15230 3695 aa8.05□□□□□ -1.12
VSTM4-202ENST00000332853 SPRR1AP35321 89 aa8.04□□□□□ -1.12
VSTM4-202ENST00000332853 COL6A5A8TX70 2615 aa8.04□□□□□ -1.12
VSTM4-202ENST00000332853 RELNP78509 3460 aa8.03□□□□□ -1.12
VSTM4-202ENST00000332853 UBR5O95071 2799 aaPredicted RBP8.02□□□□□ -1.12
VSTM4-202ENST00000332853 PRR26Q8N8Z3 221 aa8.01□□□□□ -1.13
VSTM4-202ENST00000332853 NOTCH1P46531 2555 aa8□□□□□ -1.13
VSTM4-202ENST00000332853 PLAC8Q9NZF1 115 aa8□□□□□ -1.13
VSTM4-202ENST00000332853 Q8N1X5 172 aa7.99□□□□□ -1.13
VSTM4-202ENST00000332853 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
VSTM4-202ENST00000332853 HRNRQ86YZ3 2850 aaPredicted RBP7.97□□□□□ -1.13
VSTM4-202ENST00000332853 ITPR2Q14571 2701 aa7.97□□□□□ -1.13
VSTM4-202ENST00000332853 CYSTM1Q9H1C7 97 aa7.97□□□□□ -1.13
VSTM4-202ENST00000332853 MUC3AQ02505 3323 aa7.94□□□□□ -1.14
VSTM4-202ENST00000332853 STAB1Q9NY15 2570 aa7.94□□□□□ -1.14
VSTM4-202ENST00000332853 BAHCC1Q9P281 2608 aa7.93□□□□□ -1.14
VSTM4-202ENST00000332853 PANO1I0J062 215 aa7.93□□□□□ -1.14
VSTM4-202ENST00000332853 DCHS1Q96JQ0 3298 aa7.92□□□□□ -1.14
VSTM4-202ENST00000332853 CD164Q04900 197 aa7.92□□□□□ -1.14
VSTM4-202ENST00000332853 ASH1LQ9NR48 2969 aaKnown RBP7.92□□□□□ -1.14
VSTM4-202ENST00000332853 SPANXA2-OT1Q8N9U9 137 aa7.91□□□□□ -1.14
VSTM4-202ENST00000332853 CYP4F30PQ9H0H9 118 aa7.91□□□□□ -1.14
VSTM4-202ENST00000332853 MMP24-AS1A0A0U1RRL7 71 aa7.91□□□□□ -1.14
VSTM4-202ENST00000332853 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
VSTM4-202ENST00000332853 UQCR11O14957 56 aa7.9□□□□□ -1.15
VSTM4-202ENST00000332853 APCP25054 2843 aa7.89□□□□□ -1.15
VSTM4-202ENST00000332853 CRYBG3Q68DQ2 2970 aa7.88□□□□□ -1.15
VSTM4-202ENST00000332853 ZANQ9Y493 2812 aa7.88□□□□□ -1.15
VSTM4-202ENST00000332853 MIR22HGQ0VDD5 57 aa7.87□□□□□ -1.15
VSTM4-202ENST00000332853 KRTAP10-1P60331 282 aa7.87□□□□□ -1.15
VSTM4-202ENST00000332853 LINC00472Q9H8W2 130 aa7.86□□□□□ -1.15
VSTM4-202ENST00000332853 SPRR1BP22528 89 aa7.86□□□□□ -1.15
VSTM4-202ENST00000332853 FAM229BQ4G0N7 80 aa7.85□□□□□ -1.15
VSTM4-202ENST00000332853 KRTAP4-16G5E9R7 235 aaPredicted RBP7.84□□□□□ -1.15
VSTM4-202ENST00000332853 NBEAL1Q6ZS30 2694 aa7.83□□□□□ -1.16
VSTM4-202ENST00000332853 HRES1P13985 223 aa7.83□□□□□ -1.16
VSTM4-202ENST00000332853 Q8N9P0 234 aaPredicted RBP7.82□□□□□ -1.16
VSTM4-202ENST00000332853 SMG1Q96Q15 3661 aaKnown RBP7.81□□□□□ -1.16
VSTM4-202ENST00000332853 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
VSTM4-202ENST00000332853 HIVEP1P15822 2718 aa7.8□□□□□ -1.16
VSTM4-202ENST00000332853 CSMD1Q96PZ7 3565 aa7.8□□□□□ -1.16
VSTM4-202ENST00000332853 KRTAP11-1Q8IUC1 163 aa7.79□□□□□ -1.16
VSTM4-202ENST00000332853 CRIPTQ9P021 101 aa7.78□□□□□ -1.16
VSTM4-202ENST00000332853 CELSR2Q9HCU4 2923 aa7.78□□□□□ -1.16
VSTM4-202ENST00000332853 A0A0D9SG42 100 aa7.76□□□□□ -1.17
VSTM4-202ENST00000332853 RBM12B-AS1Q9P1G2 102 aa7.76□□□□□ -1.17
VSTM4-202ENST00000332853 LINC01554Q52M75 96 aa7.75□□□□□ -1.17
VSTM4-202ENST00000332853 NSD1Q96L73 2696 aaPredicted RBP7.75□□□□□ -1.17
VSTM4-202ENST00000332853 Q6ZR54 194 aa7.75□□□□□ -1.17
VSTM4-202ENST00000332853 KRTAP7-1Q8IUC3 87 aa7.75□□□□□ -1.17
VSTM4-202ENST00000332853 Q1T7F1 81 aa7.75□□□□□ -1.17
VSTM4-202ENST00000332853 Q5W150 140 aa7.74□□□□□ -1.17
VSTM4-202ENST00000332853 DCHS2Q6V1P9 2916 aa7.73□□□□□ -1.17
VSTM4-202ENST00000332853 LINC00483Q53H64 154 aa7.73□□□□□ -1.17
VSTM4-202ENST00000332853 FBN2P35556 2912 aa7.73□□□□□ -1.17
VSTM4-202ENST00000332853 ZCCHC13Q8WW36 166 aaKnown RBP7.73□□□□□ -1.17
VSTM4-202ENST00000332853 LCE6AA0A183 80 aa7.71□□□□□ -1.18
VSTM4-202ENST00000332853 Q5XG85 94 aa7.71□□□□□ -1.18
VSTM4-202ENST00000332853 Q6ZSA8 131 aa7.7□□□□□ -1.18
VSTM4-202ENST00000332853 FP248Q71RG6 208 aaPredicted RBP7.7□□□□□ -1.18
VSTM4-202ENST00000332853 Q6ZRN7 208 aaPredicted RBP7.69□□□□□ -1.18
VSTM4-202ENST00000332853 KMT2BQ9UMN6 2715 aaPredicted RBP7.69□□□□□ -1.18
VSTM4-202ENST00000332853 A0A087X002 238 aa7.69□□□□□ -1.18
VSTM4-202ENST00000332853 Q5VSD8 79 aa7.68□□□□□ -1.18
VSTM4-202ENST00000332853 CDC42SE1Q9NRR8 79 aa7.68□□□□□ -1.18
VSTM4-202ENST00000332853 OXTP01178 125 aa7.66□□□□□ -1.18
VSTM4-202ENST00000332853 NOTCH2NLQ7Z3S9 236 aa7.62□□□□□ -1.19
VSTM4-202ENST00000332853 NF1P21359 2839 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms