RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 C1orf137Q5JT78 98 aa10.42□□□□□ -0.74
DDX41-201ENST00000330503 A0A1W2PNM2 257 aa10.42□□□□□ -0.74
DDX41-201ENST00000330503 SPRR1BP22528 89 aa10.4□□□□□ -0.74
DDX41-201ENST00000330503 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
DDX41-201ENST00000330503 FAM30AQ9NZY2 134 aa10.4□□□□□ -0.74
DDX41-201ENST00000330503 ATP5EP2Q5VTU8 51 aa10.39□□□□□ -0.75
DDX41-201ENST00000330503 SACSQ9NZJ4 4579 aa10.38□□□□□ -0.75
DDX41-201ENST00000330503 IGLV8-61A0A075B6I0 122 aa10.37□□□□□ -0.75
DDX41-201ENST00000330503 A0A0G2JQZ4 141 aa10.36□□□□□ -0.75
DDX41-201ENST00000330503 FAM236AA0A1B0GUQ0 79 aa10.36□□□□□ -0.75
DDX41-201ENST00000330503 FAM236BA0A1B0GV22 79 aa10.36□□□□□ -0.75
DDX41-201ENST00000330503 F8WEM9 126 aa10.36□□□□□ -0.75
DDX41-201ENST00000330503 Q8NBF4 154 aa10.36□□□□□ -0.75
DDX41-201ENST00000330503 HAMPP81172 84 aa10.36□□□□□ -0.75
DDX41-201ENST00000330503 A0A087WVE0 104 aa10.35□□□□□ -0.75
DDX41-201ENST00000330503 ANAPC13Q9BS18 74 aa10.35□□□□□ -0.75
DDX41-201ENST00000330503 IGFL1Q6UW32 110 aa10.34□□□□□ -0.75
DDX41-201ENST00000330503 SPRR4Q96PI1 79 aa10.34□□□□□ -0.75
DDX41-201ENST00000330503 KRTAP10-1P60331 282 aa10.34□□□□□ -0.75
DDX41-201ENST00000330503 A0A1B0GW54 56 aa10.33□□□□□ -0.76
DDX41-201ENST00000330503 HIST1H4AP62805 103 aaKnown RBP10.33□□□□□ -0.76
DDX41-201ENST00000330503 CIRBP-AS1Q8TBR5 109 aa10.33□□□□□ -0.76
DDX41-201ENST00000330503 CXCL6P80162 114 aa10.31□□□□□ -0.76
DDX41-201ENST00000330503 NREPQ16612 68 aa10.31□□□□□ -0.76
DDX41-201ENST00000330503 Q6ZSA8 131 aa10.31□□□□□ -0.76
DDX41-201ENST00000330503 ZNF861PO60384 105 aa10.3□□□□□ -0.76
DDX41-201ENST00000330503 CRYGAP11844 174 aa10.3□□□□□ -0.76
DDX41-201ENST00000330503 SCXQ7RTU7 201 aa10.3□□□□□ -0.76
DDX41-201ENST00000330503 LCE6AA0A183 80 aa10.28□□□□□ -0.76
DDX41-201ENST00000330503 LINC00483Q53H64 154 aa10.27□□□□□ -0.77
DDX41-201ENST00000330503 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
DDX41-201ENST00000330503 ZNF706Q9Y5V0 76 aaPredicted RBP10.22□□□□□ -0.77
DDX41-201ENST00000330503 LRP1BQ9NZR2 4599 aa10.22□□□□□ -0.77
DDX41-201ENST00000330503 BPY2O14599 106 aa10.21□□□□□ -0.77
DDX41-201ENST00000330503 ANAPC11Q9NYG5 84 aa10.21□□□□□ -0.78
DDX41-201ENST00000330503 ATOX1O00244 68 aa10.2□□□□□ -0.78
DDX41-201ENST00000330503 Q8N9L7 120 aa10.2□□□□□ -0.78
DDX41-201ENST00000330503 CCDC179H3BU77 68 aa10.19□□□□□ -0.78
DDX41-201ENST00000330503 A0A087WSZ3 146 aa10.19□□□□□ -0.78
DDX41-201ENST00000330503 IGLV9-49A0A0B4J1Y8 123 aa10.19□□□□□ -0.78
DDX41-201ENST00000330503 IGKV4-1P06312 121 aa10.18□□□□□ -0.78
DDX41-201ENST00000330503 LINC00336Q6ZUF6 198 aa10.16□□□□□ -0.78
DDX41-201ENST00000330503 C9orf153Q5TBE3 101 aa10.15□□□□□ -0.78
DDX41-201ENST00000330503 DSCR10P59022 87 aa10.14□□□□□ -0.79
DDX41-201ENST00000330503 RYR2Q92736 4967 aa10.13□□□□□ -0.79
DDX41-201ENST00000330503 A0A1B0GVY2 172 aa10.13□□□□□ -0.79
DDX41-201ENST00000330503 PKHD1P08F94 4074 aa10.12□□□□□ -0.79
DDX41-201ENST00000330503 RPL37AP61513 92 aaKnown RBP10.12□□□□□ -0.79
DDX41-201ENST00000330503 MOBPQ13875 183 aa10.11□□□□□ -0.79
DDX41-201ENST00000330503 DEFB116Q30KQ4 102 aa10.11□□□□□ -0.79
DDX41-201ENST00000330503 COX7CP15954 63 aa10.1□□□□□ -0.79
DDX41-201ENST00000330503 SERP2Q8N6R1 65 aa10.09□□□□□ -0.79
DDX41-201ENST00000330503 DYNC1H1Q14204 4646 aaKnown RBP10.09□□□□□ -0.79
DDX41-201ENST00000330503 UQCRQO14949 82 aa10.08□□□□□ -0.8
DDX41-201ENST00000330503 LINC00472Q9H8W2 130 aa10.07□□□□□ -0.8
DDX41-201ENST00000330503 VPS13BQ7Z7G8 4022 aa10.07□□□□□ -0.8
DDX41-201ENST00000330503 K7EQZ3 153 aa10.06□□□□□ -0.8
DDX41-201ENST00000330503 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
DDX41-201ENST00000330503 KMT2CQ8NEZ4 4911 aaKnown RBP10.05□□□□□ -0.8
DDX41-201ENST00000330503 TRAV7A0A075B6U4 112 aa10.01□□□□□ -0.81
DDX41-201ENST00000330503 Q96NJ1 140 aa10□□□□□ -0.81
DDX41-201ENST00000330503 SMIM20Q8N5G0 67 aa9.99□□□□□ -0.81
DDX41-201ENST00000330503 A0A087X002 238 aa9.98□□□□□ -0.81
DDX41-201ENST00000330503 KRTAP13-2Q52LG2 175 aa9.98□□□□□ -0.81
DDX41-201ENST00000330503 SSBP3-AS1Q7Z2R9 100 aa9.98□□□□□ -0.81
DDX41-201ENST00000330503 KRTAP1-4P0C5Y4 121 aa9.97□□□□□ -0.81
DDX41-201ENST00000330503 APOBP04114 4563 aaKnown RBP9.96□□□□□ -0.81
DDX41-201ENST00000330503 FAM229BQ4G0N7 80 aa9.95□□□□□ -0.82
DDX41-201ENST00000330503 A8MWP4 228 aa9.95□□□□□ -0.82
DDX41-201ENST00000330503 PRR15Q8IV56 129 aa9.95□□□□□ -0.82
DDX41-201ENST00000330503 OCR1Q9BZK8 76 aa9.95□□□□□ -0.82
DDX41-201ENST00000330503 CYSTM1Q9H1C7 97 aa9.94□□□□□ -0.82
DDX41-201ENST00000330503 SS18L2Q9UHA2 77 aa9.94□□□□□ -0.82
DDX41-201ENST00000330503 HCG22E2RYF7 251 aa9.94□□□□□ -0.82
DDX41-201ENST00000330503 SMR3BP02814 79 aaPredicted RBP9.94□□□□□ -0.82
DDX41-201ENST00000330503 J3KT08 172 aa9.93□□□□□ -0.82
DDX41-201ENST00000330503 CD164Q04900 197 aa9.92□□□□□ -0.82
DDX41-201ENST00000330503 KRTAP29-1A8MX34 341 aaPredicted RBP9.89□□□□□ -0.83
DDX41-201ENST00000330503 C20orf197Q8N268 126 aa9.89□□□□□ -0.83
DDX41-201ENST00000330503 SPINK6Q6UWN8 80 aa9.88□□□□□ -0.83
DDX41-201ENST00000330503 WFDC13Q8IUB5 93 aa9.88□□□□□ -0.83
DDX41-201ENST00000330503 PLA2G1BP04054 148 aaKnown RBP9.86□□□□□ -0.83
DDX41-201ENST00000330503 KRTAP10-4P60372 401 aaPredicted RBP9.86□□□□□ -0.83
DDX41-201ENST00000330503 FAT1Q14517 4588 aa9.85□□□□□ -0.83
DDX41-201ENST00000330503 NDUFB1O75438 58 aa9.85□□□□□ -0.83
DDX41-201ENST00000330503 MMP24-AS1A0A0U1RRL7 71 aa9.83□□□□□ -0.84
DDX41-201ENST00000330503 CASC2Q6XLA1 102 aa9.83□□□□□ -0.84
DDX41-201ENST00000330503 RYR3Q15413 4870 aa9.82□□□□□ -0.84
DDX41-201ENST00000330503 ASB16-AS1Q495Z4 193 aa9.82□□□□□ -0.84
DDX41-201ENST00000330503 SNURFQ9Y675 71 aa9.82□□□□□ -0.84
DDX41-201ENST00000330503 KLKP1Q107X0 134 aa9.81□□□□□ -0.84
DDX41-201ENST00000330503 A0A1B0GVX0 72 aa9.8□□□□□ -0.84
DDX41-201ENST00000330503 TMEM254Q8TBM7 123 aa9.79□□□□□ -0.84
DDX41-201ENST00000330503 Q5XG85 94 aa9.78□□□□□ -0.84
DDX41-201ENST00000330503 C8orf17Q9NRJ1 99 aa9.78□□□□□ -0.84
DDX41-201ENST00000330503 IGHV6-1A0A0B4J1U7 121 aa9.77□□□□□ -0.84
DDX41-201ENST00000330503 TYMSOSQ8TAI1 123 aa9.77□□□□□ -0.84
DDX41-201ENST00000330503 CDK2AP2O75956 126 aa9.77□□□□□ -0.85
DDX41-201ENST00000330503 A0A0U1RQV1 116 aa9.76□□□□□ -0.85
DDX41-201ENST00000330503 NOTCH2NLQ7Z3S9 236 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms