RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 Q8NBF4 154 aa11.06□□□□□ -0.64
PTP4A3-201ENST00000329397 PRLHP81277 87 aa11.06□□□□□ -0.64
PTP4A3-201ENST00000329397 PLA2G2DQ9UNK4 145 aa11.05□□□□□ -0.64
PTP4A3-201ENST00000329397 DNAH9Q9NYC9 4486 aa11.05□□□□□ -0.64
PTP4A3-201ENST00000329397 ATP5EP56381 51 aaPredicted RBP11.05□□□□□ -0.64
PTP4A3-201ENST00000329397 PRR26Q8N8Z3 221 aa11.05□□□□□ -0.64
PTP4A3-201ENST00000329397 K7EQZ3 153 aa11.05□□□□□ -0.64
PTP4A3-201ENST00000329397 IGLV5-37A0A075B6J1 123 aa11.03□□□□□ -0.64
PTP4A3-201ENST00000329397 DSCR10P59022 87 aa11.03□□□□□ -0.64
PTP4A3-201ENST00000329397 A8MU10 97 aa11.02□□□□□ -0.64
PTP4A3-201ENST00000329397 NDUFC1O43677 76 aa11.02□□□□□ -0.64
PTP4A3-201ENST00000329397 REG3GQ6UW15 175 aa11.02□□□□□ -0.65
PTP4A3-201ENST00000329397 KRTAP1-5Q9BYS1 174 aa11.02□□□□□ -0.65
PTP4A3-201ENST00000329397 LINC00476Q8WZB0 136 aa11.01□□□□□ -0.65
PTP4A3-201ENST00000329397 A0A096LNI7 61 aa11□□□□□ -0.65
PTP4A3-201ENST00000329397 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
PTP4A3-201ENST00000329397 SPRR4Q96PI1 79 aa10.98□□□□□ -0.65
PTP4A3-201ENST00000329397 PSPHP1O15172 72 aa10.96□□□□□ -0.66
PTP4A3-201ENST00000329397 CHTF8P0CG12 524 aa10.96□□□□□ -0.66
PTP4A3-201ENST00000329397 DNAH7Q8WXX0 4024 aa10.96□□□□□ -0.66
PTP4A3-201ENST00000329397 IGFL1Q6UW32 110 aa10.95□□□□□ -0.66
PTP4A3-201ENST00000329397 K7EIL1 84 aa10.95□□□□□ -0.66
PTP4A3-201ENST00000329397 LRCOL1A6NCL2 159 aa10.94□□□□□ -0.66
PTP4A3-201ENST00000329397 KRTAP11-1Q8IUC1 163 aa10.94□□□□□ -0.66
PTP4A3-201ENST00000329397 A0A087WSZ3 146 aa10.93□□□□□ -0.66
PTP4A3-201ENST00000329397 PSCAO43653 123 aa10.93□□□□□ -0.66
PTP4A3-201ENST00000329397 RPL37AP61513 92 aaKnown RBP10.92□□□□□ -0.66
PTP4A3-201ENST00000329397 WFDC13Q8IUB5 93 aa10.92□□□□□ -0.66
PTP4A3-201ENST00000329397 PRR4Q16378 134 aa10.92□□□□□ -0.66
PTP4A3-201ENST00000329397 PHF5AQ7RTV0 110 aaKnown RBP10.89□□□□□ -0.67
PTP4A3-201ENST00000329397 Q1T7F1 81 aa10.88□□□□□ -0.67
PTP4A3-201ENST00000329397 A0A1B0GW54 56 aa10.87□□□□□ -0.67
PTP4A3-201ENST00000329397 HCG22E2RYF7 251 aa10.87□□□□□ -0.67
PTP4A3-201ENST00000329397 C16orf90A8MZG2 172 aa10.87□□□□□ -0.67
PTP4A3-201ENST00000329397 UBE2AP49459 152 aa10.84□□□□□ -0.67
PTP4A3-201ENST00000329397 NDUFS5O43920 106 aa10.84□□□□□ -0.67
PTP4A3-201ENST00000329397 UBE2DNLQ8IWF7 75 aa10.83□□□□□ -0.68
PTP4A3-201ENST00000329397 LCE6AA0A183 80 aa10.82□□□□□ -0.68
PTP4A3-201ENST00000329397 SPTSSBQ8NFR3 76 aa10.82□□□□□ -0.68
PTP4A3-201ENST00000329397 TRAV22A0A0B4J277 110 aa10.81□□□□□ -0.68
PTP4A3-201ENST00000329397 A8MUN3 132 aa10.81□□□□□ -0.68
PTP4A3-201ENST00000329397 ZCCHC13Q8WW36 166 aaKnown RBP10.8□□□□□ -0.68
PTP4A3-201ENST00000329397 MDFIQ99750 246 aa10.79□□□□□ -0.68
PTP4A3-201ENST00000329397 C1orf64Q8NEQ6 169 aa10.78□□□□□ -0.68
PTP4A3-201ENST00000329397 hDV103S1A0JD37 113 aa10.78□□□□□ -0.68
PTP4A3-201ENST00000329397 CNBPP62633 177 aaKnown RBP10.78□□□□□ -0.68
PTP4A3-201ENST00000329397 PANO1I0J062 215 aa10.77□□□□□ -0.68
PTP4A3-201ENST00000329397 PLECQ15149 4684 aaKnown RBP10.76□□□□□ -0.69
PTP4A3-201ENST00000329397 IGLV8-61A0A075B6I0 122 aa10.73□□□□□ -0.69
PTP4A3-201ENST00000329397 A6NN06 94 aa10.73□□□□□ -0.69
PTP4A3-201ENST00000329397 LCA10Q71F78 164 aa10.73□□□□□ -0.69
PTP4A3-201ENST00000329397 LINC00208Q96KT6 92 aa10.73□□□□□ -0.69
PTP4A3-201ENST00000329397 APLNQ9ULZ1 77 aa10.7□□□□□ -0.7
PTP4A3-201ENST00000329397 C7orf65Q6ZTY9 151 aa10.69□□□□□ -0.7
PTP4A3-201ENST00000329397 CASC2Q6XLA1 102 aa10.69□□□□□ -0.7
PTP4A3-201ENST00000329397 KRTAP29-1A8MX34 341 aaPredicted RBP10.68□□□□□ -0.7
PTP4A3-201ENST00000329397 Q5VV11 94 aa10.67□□□□□ -0.7
PTP4A3-201ENST00000329397 FRAS1Q86XX4 4008 aa10.67□□□□□ -0.7
PTP4A3-201ENST00000329397 H0Y9J4 135 aa10.66□□□□□ -0.7
PTP4A3-201ENST00000329397 MP68P56378 58 aa10.66□□□□□ -0.7
PTP4A3-201ENST00000329397 IGLV9-49A0A0B4J1Y8 123 aa10.65□□□□□ -0.7
PTP4A3-201ENST00000329397 C9orf163Q8N9P6 203 aa10.65□□□□□ -0.7
PTP4A3-201ENST00000329397 H0Y9P7 68 aa10.65□□□□□ -0.71
PTP4A3-201ENST00000329397 LINC00472Q9H8W2 130 aa10.65□□□□□ -0.71
PTP4A3-201ENST00000329397 ATP11AUNQ6ZP68 121 aa10.64□□□□□ -0.71
PTP4A3-201ENST00000329397 CHKB-CPT1BH3BT56 60 aa10.63□□□□□ -0.71
PTP4A3-201ENST00000329397 A8MWP4 228 aa10.62□□□□□ -0.71
PTP4A3-201ENST00000329397 B9D2Q9BPU9 175 aa10.62□□□□□ -0.71
PTP4A3-201ENST00000329397 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.62□□□□□ -0.71
PTP4A3-201ENST00000329397 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
PTP4A3-201ENST00000329397 SPRR1BP22528 89 aa10.61□□□□□ -0.71
PTP4A3-201ENST00000329397 STARD9Q9P2P6 4700 aa10.59□□□□□ -0.71
PTP4A3-201ENST00000329397 NBDYA0A0U1RRE5 68 aa10.58□□□□□ -0.72
PTP4A3-201ENST00000329397 DYNC2H1Q8NCM8 4307 aaKnown RBP10.58□□□□□ -0.72
PTP4A3-201ENST00000329397 ANAPC11Q9NYG5 84 aa10.58□□□□□ -0.72
PTP4A3-201ENST00000329397 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
PTP4A3-201ENST00000329397 KMT2AQ03164 3969 aa10.56□□□□□ -0.72
PTP4A3-201ENST00000329397 MMP24-AS1A0A0U1RRL7 71 aa10.55□□□□□ -0.72
PTP4A3-201ENST00000329397 NDUFB1O75438 58 aa10.55□□□□□ -0.72
PTP4A3-201ENST00000329397 LINC00313P59037 77 aa10.55□□□□□ -0.72
PTP4A3-201ENST00000329397 KRTAP13-1Q8IUC0 172 aa10.55□□□□□ -0.72
PTP4A3-201ENST00000329397 Q6ZRN7 208 aaPredicted RBP10.55□□□□□ -0.72
PTP4A3-201ENST00000329397 TGP01266 2768 aa10.54□□□□□ -0.72
PTP4A3-201ENST00000329397 PRKDCP78527 4128 aaKnown RBP10.52□□□□□ -0.73
PTP4A3-201ENST00000329397 HECTD4Q9Y4D8 3996 aa10.51□□□□□ -0.73
PTP4A3-201ENST00000329397 LINC01554Q52M75 96 aa10.51□□□□□ -0.73
PTP4A3-201ENST00000329397 DNAH8Q96JB1 4490 aa10.51□□□□□ -0.73
PTP4A3-201ENST00000329397 PCOTHQ58A44 107 aa10.5□□□□□ -0.73
PTP4A3-201ENST00000329397 Q96NJ1 140 aa10.5□□□□□ -0.73
PTP4A3-201ENST00000329397 MOBPQ13875 183 aa10.5□□□□□ -0.73
PTP4A3-201ENST00000329397 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
PTP4A3-201ENST00000329397 PRAC1Q96KF2 57 aa10.48□□□□□ -0.73
PTP4A3-201ENST00000329397 IGHV6-1A0A0B4J1U7 121 aa10.46□□□□□ -0.73
PTP4A3-201ENST00000329397 DNAH2Q9P225 4427 aa10.45□□□□□ -0.74
PTP4A3-201ENST00000329397 A6NED7 52 aa10.45□□□□□ -0.74
PTP4A3-201ENST00000329397 PRR15LQ9BU68 103 aa10.45□□□□□ -0.74
PTP4A3-201ENST00000329397 VPS13DQ5THJ4 4388 aa10.44□□□□□ -0.74
PTP4A3-201ENST00000329397 PSORS1C2Q9UIG4 136 aa10.44□□□□□ -0.74
PTP4A3-201ENST00000329397 A0A087X002 238 aa10.43□□□□□ -0.74
PTP4A3-201ENST00000329397 NOTCH2NLQ7Z3S9 236 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms