RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 FASNP49327 2511 aaKnown RBP6.43□□□□□ -1.38
SNRNP200-201ENST00000323853 Q5VSD8 79 aa6.42□□□□□ -1.38
SNRNP200-201ENST00000323853 SETD2Q9BYW2 2564 aaPredicted RBP6.42□□□□□ -1.38
SNRNP200-201ENST00000323853 MTORP42345 2549 aa6.41□□□□□ -1.38
SNRNP200-201ENST00000323853 H1FX-AS1Q4G0G2 97 aa6.4□□□□□ -1.39
SNRNP200-201ENST00000323853 LCE6AA0A183 80 aa6.38□□□□□ -1.39
SNRNP200-201ENST00000323853 M0R2T5 61 aa6.37□□□□□ -1.39
SNRNP200-201ENST00000323853 ROMO1P60602 79 aa6.35□□□□□ -1.39
SNRNP200-201ENST00000323853 KRTAP11-1Q8IUC1 163 aa6.34□□□□□ -1.39
SNRNP200-201ENST00000323853 F8P00451 2351 aa6.34□□□□□ -1.39
SNRNP200-201ENST00000323853 SEC61BP60468 96 aaKnown RBP6.34□□□□□ -1.39
SNRNP200-201ENST00000323853 A0A087X002 238 aa6.34□□□□□ -1.39
SNRNP200-201ENST00000323853 RPL37P61927 97 aaKnown RBP6.34□□□□□ -1.4
SNRNP200-201ENST00000323853 R4GN34 69 aa6.34□□□□□ -1.4
SNRNP200-201ENST00000323853 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
SNRNP200-201ENST00000323853 NOTCH2NLQ7Z3S9 236 aa6.32□□□□□ -1.4
SNRNP200-201ENST00000323853 TRANK1O15050 2925 aa6.32□□□□□ -1.4
SNRNP200-201ENST00000323853 ASB16-AS1Q495Z4 193 aa6.31□□□□□ -1.4
SNRNP200-201ENST00000323853 PCNTO95613 3336 aa6.3□□□□□ -1.4
SNRNP200-201ENST00000323853 Q6ZRN7 208 aaPredicted RBP6.29□□□□□ -1.4
SNRNP200-201ENST00000323853 MKI67P46013 3256 aaKnown RBP6.28□□□□□ -1.4
SNRNP200-201ENST00000323853 SPATA8Q6RVD6 105 aa6.27□□□□□ -1.4
SNRNP200-201ENST00000323853 ADM2Q7Z4H4 148 aa6.27□□□□□ -1.41
SNRNP200-201ENST00000323853 M0QZ58 72 aa6.26□□□□□ -1.41
SNRNP200-201ENST00000323853 RPS29P62273 56 aaKnown RBP6.26□□□□□ -1.41
SNRNP200-201ENST00000323853 FLNAP21333 2647 aaKnown RBP6.25□□□□□ -1.41
SNRNP200-201ENST00000323853 KRTAP13-1Q8IUC0 172 aa6.24□□□□□ -1.41
SNRNP200-201ENST00000323853 H3BS24 57 aa6.23□□□□□ -1.41
SNRNP200-201ENST00000323853 PRRC2CQ9Y520 2896 aaKnown RBP6.23□□□□□ -1.41
SNRNP200-201ENST00000323853 ITPR3Q14573 2671 aa6.19□□□□□ -1.42
SNRNP200-201ENST00000323853 KRTAP13-2Q52LG2 175 aa6.18□□□□□ -1.42
SNRNP200-201ENST00000323853 A6NN06 94 aa6.18□□□□□ -1.42
SNRNP200-201ENST00000323853 HECTD1Q9ULT8 2610 aa6.17□□□□□ -1.42
SNRNP200-201ENST00000323853 BRCA2P51587 3418 aa6.16□□□□□ -1.42
SNRNP200-201ENST00000323853 A0A0A0MQY5 61 aa6.14□□□□□ -1.43
SNRNP200-201ENST00000323853 EPG5Q9HCE0 2579 aa6.14□□□□□ -1.43
SNRNP200-201ENST00000323853 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
SNRNP200-201ENST00000323853 A8MU10 97 aa6.11□□□□□ -1.43
SNRNP200-201ENST00000323853 AKAP13Q12802 2813 aa6.1□□□□□ -1.43
SNRNP200-201ENST00000323853 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
SNRNP200-201ENST00000323853 A0A0C4DFX4 3053 aa6.08□□□□□ -1.44
SNRNP200-201ENST00000323853 LAMA3Q16787 3333 aa6.07□□□□□ -1.44
SNRNP200-201ENST00000323853 RANBP2P49792 3224 aaKnown RBP6.05□□□□□ -1.44
SNRNP200-201ENST00000323853 MGAQ8IWI9 3026 aa6.05□□□□□ -1.44
SNRNP200-201ENST00000323853 CFAP54Q96N23 3096 aa6.05□□□□□ -1.44
SNRNP200-201ENST00000323853 A8MUU9 505 aa6.04□□□□□ -1.44
SNRNP200-201ENST00000323853 CDH23Q9H251 3354 aa6.04□□□□□ -1.44
SNRNP200-201ENST00000323853 TRIOO75962 3097 aa6.02□□□□□ -1.45
SNRNP200-201ENST00000323853 ATRQ13535 2644 aa6.02□□□□□ -1.45
SNRNP200-201ENST00000323853 DNAH14Q0VDD8 3507 aa5.98□□□□□ -1.45
SNRNP200-201ENST00000323853 UNC80Q8N2C7 3258 aa5.97□□□□□ -1.45
SNRNP200-201ENST00000323853 HELZ2Q9BYK8 2649 aaKnown RBP5.97□□□□□ -1.45
SNRNP200-201ENST00000323853 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
SNRNP200-201ENST00000323853 ZNF292O60281 2723 aa5.97□□□□□ -1.45
SNRNP200-201ENST00000323853 CFAP46Q8IYW2 2715 aa5.94□□□□□ -1.46
SNRNP200-201ENST00000323853 MGAM2Q2M2H8 2515 aa5.93□□□□□ -1.46
SNRNP200-201ENST00000323853 LAMA2P24043 3122 aaKnown RBP5.91□□□□□ -1.46
SNRNP200-201ENST00000323853 XIRP2A4UGR9 3374 aa5.91□□□□□ -1.46
SNRNP200-201ENST00000323853 USP24Q9UPU5 2620 aa5.9□□□□□ -1.46
SNRNP200-201ENST00000323853 CHD6Q8TD26 2715 aa5.89□□□□□ -1.47
SNRNP200-201ENST00000323853 SZT2Q5T011 3432 aa5.89□□□□□ -1.47
SNRNP200-201ENST00000323853 SPTBN5Q9NRC6 3674 aaKnown RBP5.89□□□□□ -1.47
SNRNP200-201ENST00000323853 KRTAP1-4P0C5Y4 121 aa5.89□□□□□ -1.47
SNRNP200-201ENST00000323853 KRTAP21-3Q3LHN1 58 aa5.88□□□□□ -1.47
SNRNP200-201ENST00000323853 MAST4O15021 2626 aa5.87□□□□□ -1.47
SNRNP200-201ENST00000323853 PRUNE2Q8WUY3 3088 aa5.86□□□□□ -1.47
SNRNP200-201ENST00000323853 WDFY4Q6ZS81 3184 aa5.86□□□□□ -1.47
SNRNP200-201ENST00000323853 GCN1Q92616 2671 aaKnown RBP5.85□□□□□ -1.47
SNRNP200-201ENST00000323853 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
SNRNP200-201ENST00000323853 CELSR3Q9NYQ7 3312 aa5.83□□□□□ -1.48
SNRNP200-201ENST00000323853 COL6A3P12111 3177 aa5.83□□□□□ -1.48
SNRNP200-201ENST00000323853 FRYQ5TBA9 3013 aa5.83□□□□□ -1.48
SNRNP200-201ENST00000323853 IGSF10Q6WRI0 2623 aa5.82□□□□□ -1.48
SNRNP200-201ENST00000323853 FLNBO75369 2602 aaKnown RBP5.82□□□□□ -1.48
SNRNP200-201ENST00000323853 XP32Q5T750 250 aa5.81□□□□□ -1.48
SNRNP200-201ENST00000323853 TNP1P09430 55 aa5.79□□□□□ -1.48
SNRNP200-201ENST00000323853 VCANP13611 3396 aa5.79□□□□□ -1.48
SNRNP200-201ENST00000323853 TEX15Q9BXT5 2789 aa5.79□□□□□ -1.48
SNRNP200-201ENST00000323853 NDUFAF8A1L188 74 aa5.79□□□□□ -1.48
SNRNP200-201ENST00000323853 LAMA1P25391 3075 aa5.78□□□□□ -1.48
SNRNP200-201ENST00000323853 TEP1Q99973 2627 aaKnown RBP5.78□□□□□ -1.48
SNRNP200-201ENST00000323853 VPS13AQ96RL7 3174 aa5.77□□□□□ -1.49
SNRNP200-201ENST00000323853 SETXQ7Z333 2677 aaKnown RBP5.76□□□□□ -1.49
SNRNP200-201ENST00000323853 H0YAA0 97 aa5.76□□□□□ -1.49
SNRNP200-201ENST00000323853 NBEAL2Q6ZNJ1 2754 aa5.75□□□□□ -1.49
SNRNP200-201ENST00000323853 LRBAP50851 2863 aa5.75□□□□□ -1.49
SNRNP200-201ENST00000323853 KMT2BQ9UMN6 2715 aaPredicted RBP5.75□□□□□ -1.49
SNRNP200-201ENST00000323853 UNC79Q9P2D8 2635 aa5.73□□□□□ -1.49
SNRNP200-201ENST00000323853 DSPP15924 2871 aaKnown RBP5.73□□□□□ -1.49
SNRNP200-201ENST00000323853 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.49
SNRNP200-201ENST00000323853 USP34Q70CQ2 3546 aa5.71□□□□□ -1.5
SNRNP200-201ENST00000323853 KALRNO60229 2985 aa5.7□□□□□ -1.5
SNRNP200-201ENST00000323853 CENPEQ02224 2701 aa5.69□□□□□ -1.5
SNRNP200-201ENST00000323853 NBEAL1Q6ZS30 2694 aa5.68□□□□□ -1.5
SNRNP200-201ENST00000323853 PP632Q6XCG6 107 aa5.68□□□□□ -1.5
SNRNP200-201ENST00000323853 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
SNRNP200-201ENST00000323853 ITPR2Q14571 2701 aa5.65□□□□□ -1.5
SNRNP200-201ENST00000323853 ZZEF1O43149 2961 aa5.65□□□□□ -1.51
SNRNP200-201ENST00000323853 A0A1B0GVY2 172 aa5.64□□□□□ -1.51
SNRNP200-201ENST00000323853 TNRC18O15417 2968 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms