RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 PRR3P79522 188 aaKnown RBP3.1□□□□□ -1.91
CNOT1-201ENST00000317147 ZNF575Q86XF7 245 aa3.1□□□□□ -1.91
CNOT1-201ENST00000317147 C6orf48Q9UBA6 75 aa3.1□□□□□ -1.91
CNOT1-201ENST00000317147 C16orf95Q9H693 158 aa3.1□□□□□ -1.91
CNOT1-201ENST00000317147 LRCOL1A6NCL2 159 aa3.09□□□□□ -1.91
CNOT1-201ENST00000317147 LINC00528Q8N1L1 170 aa3.09□□□□□ -1.91
CNOT1-201ENST00000317147 IGLV4-60A0A075B6I1 120 aa3.09□□□□□ -1.91
CNOT1-201ENST00000317147 DEFB131BA0A096LNP1 70 aa3.09□□□□□ -1.91
CNOT1-201ENST00000317147 IGLV5-48A0A075B6I7 105 aa3.09□□□□□ -1.92
CNOT1-201ENST00000317147 FAM229AH3BQW9 127 aa3.09□□□□□ -1.92
CNOT1-201ENST00000317147 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.09□□□□□ -1.92
CNOT1-201ENST00000317147 LINC01556Q5JQF7 62 aa3.09□□□□□ -1.92
CNOT1-201ENST00000317147 LY6G6CO95867 125 aa3.08□□□□□ -1.92
CNOT1-201ENST00000317147 X6R8D5 127 aa3.08□□□□□ -1.92
CNOT1-201ENST00000317147 COA5Q86WW8 74 aa3.08□□□□□ -1.92
CNOT1-201ENST00000317147 C8orf17Q9NRJ1 99 aa3.08□□□□□ -1.92
CNOT1-201ENST00000317147 BBC3Q96PG8 261 aaPredicted RBP3.07□□□□□ -1.92
CNOT1-201ENST00000317147 PHF5AQ7RTV0 110 aaKnown RBP3.07□□□□□ -1.92
CNOT1-201ENST00000317147 EPM2AB3EWF7 344 aa3.07□□□□□ -1.92
CNOT1-201ENST00000317147 H3BS24 57 aa3.07□□□□□ -1.92
CNOT1-201ENST00000317147 PRLHP81277 87 aa3.07□□□□□ -1.92
CNOT1-201ENST00000317147 Q6ZSN1 163 aa3.07□□□□□ -1.92
CNOT1-201ENST00000317147 A0A087WSZ3 146 aa3.07□□□□□ -1.92
CNOT1-201ENST00000317147 TLX1NBP0CAT3 122 aa3.07□□□□□ -1.92
CNOT1-201ENST00000317147 SPINK6Q6UWN8 80 aa3.07□□□□□ -1.92
CNOT1-201ENST00000317147 SPRR4Q96PI1 79 aa3.07□□□□□ -1.92
CNOT1-201ENST00000317147 DMAC1Q96GE9 116 aa3.07□□□□□ -1.92
CNOT1-201ENST00000317147 J3QL48 77 aa3.06□□□□□ -1.92
CNOT1-201ENST00000317147 LINC00483Q53H64 154 aa3.06□□□□□ -1.92
CNOT1-201ENST00000317147 LINC01006Q8NI28 216 aa3.06□□□□□ -1.92
CNOT1-201ENST00000317147 PRR34Q9NV39 138 aa3.06□□□□□ -1.92
CNOT1-201ENST00000317147 MIR22HGQ0VDD5 57 aa3.05□□□□□ -1.92
CNOT1-201ENST00000317147 LINC00612Q8N6U2 182 aa3.05□□□□□ -1.92
CNOT1-201ENST00000317147 IGLV7-46A0A075B6I9 117 aa3.05□□□□□ -1.92
CNOT1-201ENST00000317147 A8MUN3 132 aa3.05□□□□□ -1.92
CNOT1-201ENST00000317147 A0A1W2PPR1 153 aa3.05□□□□□ -1.92
CNOT1-201ENST00000317147 DEFB4AO15263 64 aa3.05□□□□□ -1.92
CNOT1-201ENST00000317147 C18orf65Q6ZTR6 163 aa3.05□□□□□ -1.92
CNOT1-201ENST00000317147 KIAA0087Q14695 138 aa3.04□□□□□ -1.92
CNOT1-201ENST00000317147 IGLV5-37A0A075B6J1 123 aa3.04□□□□□ -1.92
CNOT1-201ENST00000317147 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.04□□□□□ -1.92
CNOT1-201ENST00000317147 IGLV7-43P04211 117 aa3.04□□□□□ -1.92
CNOT1-201ENST00000317147 FP248Q71RG6 208 aaPredicted RBP3.04□□□□□ -1.92
CNOT1-201ENST00000317147 IGHV6-1A0A0B4J1U7 121 aa3.04□□□□□ -1.92
CNOT1-201ENST00000317147 RBM12B-AS1Q9P1G2 102 aa3.04□□□□□ -1.92
CNOT1-201ENST00000317147 PCOTHQ58A44 107 aa3.03□□□□□ -1.92
CNOT1-201ENST00000317147 LINC00476Q8WZB0 136 aa3.03□□□□□ -1.92
CNOT1-201ENST00000317147 IGKV2-24A0A0C4DH68 120 aa3.03□□□□□ -1.92
CNOT1-201ENST00000317147 SPINK1P00995 79 aa3.03□□□□□ -1.92
CNOT1-201ENST00000317147 SEC61BP60468 96 aaKnown RBP3.02□□□□□ -1.93
CNOT1-201ENST00000317147 C16orf90A8MZG2 172 aa3.02□□□□□ -1.93
CNOT1-201ENST00000317147 CHTF8P0CG12 524 aa3.02□□□□□ -1.93
CNOT1-201ENST00000317147 FAM104AQ969W3 186 aa3.02□□□□□ -1.93
CNOT1-201ENST00000317147 LINC01558Q9Y6Z2 57 aa3.02□□□□□ -1.93
CNOT1-201ENST00000317147 K7EQZ3 153 aa3.01□□□□□ -1.93
CNOT1-201ENST00000317147 A0A096LNI7 61 aa3.01□□□□□ -1.93
CNOT1-201ENST00000317147 IGLV9-49A0A0B4J1Y8 123 aa3.01□□□□□ -1.93
CNOT1-201ENST00000317147 DNAH10OSP0CZ25 163 aa3.01□□□□□ -1.93
CNOT1-201ENST00000317147 INAFM1C9JVW0 142 aa3.01□□□□□ -1.93
CNOT1-201ENST00000317147 C9orf129Q5T035 196 aaKnown RBP3□□□□□ -1.93
CNOT1-201ENST00000317147 LINC00588Q9Y4M8 146 aa3□□□□□ -1.93
CNOT1-201ENST00000317147 C15orf56Q8N910 161 aa3□□□□□ -1.93
CNOT1-201ENST00000317147 Q8N9P0 234 aaPredicted RBP3□□□□□ -1.93
CNOT1-201ENST00000317147 MRPL34Q9BQ48 92 aaKnown RBP3□□□□□ -1.93
CNOT1-201ENST00000317147 IGKV2D-30A0A075B6S6 120 aa3□□□□□ -1.93
CNOT1-201ENST00000317147 IGKV2-30P06310 120 aa3□□□□□ -1.93
CNOT1-201ENST00000317147 C22orf24Q9Y442 160 aa3□□□□□ -1.93
CNOT1-201ENST00000317147 IGLV5-52A0A0A0MRZ9 124 aa2.99□□□□□ -1.93
CNOT1-201ENST00000317147 C1orf134Q5TEV5 83 aa2.99□□□□□ -1.93
CNOT1-201ENST00000317147 CIRBP-AS1Q8TBR5 109 aa2.99□□□□□ -1.93
CNOT1-201ENST00000317147 LCE6AA0A183 80 aa2.99□□□□□ -1.93
CNOT1-201ENST00000317147 IGLV8-61A0A075B6I0 122 aa2.99□□□□□ -1.93
CNOT1-201ENST00000317147 CYSTM1Q9H1C7 97 aa2.99□□□□□ -1.93
CNOT1-201ENST00000317147 IGLV1-50A0A075B6I6 118 aa2.99□□□□□ -1.93
CNOT1-201ENST00000317147 A0A1B0GVX0 72 aa2.99□□□□□ -1.93
CNOT1-201ENST00000317147 KRTAP16-1A8MUX0 517 aa2.97□□□□□ -1.93
CNOT1-201ENST00000317147 Q5VV11 94 aa2.97□□□□□ -1.93
CNOT1-201ENST00000317147 LINC00313P59037 77 aa2.97□□□□□ -1.93
CNOT1-201ENST00000317147 Q8N377 158 aa2.97□□□□□ -1.93
CNOT1-201ENST00000317147 Q8NAQ8 132 aa2.97□□□□□ -1.93
CNOT1-201ENST00000317147 IGFL1Q6UW32 110 aa2.96□□□□□ -1.94
CNOT1-201ENST00000317147 CNBPP62633 177 aaKnown RBP2.95□□□□□ -1.94
CNOT1-201ENST00000317147 ZCCHC13Q8WW36 166 aaKnown RBP2.95□□□□□ -1.94
CNOT1-201ENST00000317147 WWC2-AS2Q96NR7 200 aa2.95□□□□□ -1.94
CNOT1-201ENST00000317147 TNP2Q05952 138 aa2.95□□□□□ -1.94
CNOT1-201ENST00000317147 DSCR10P59022 87 aa2.94□□□□□ -1.94
CNOT1-201ENST00000317147 DEFB116Q30KQ4 102 aa2.94□□□□□ -1.94
CNOT1-201ENST00000317147 APLNQ9ULZ1 77 aa2.94□□□□□ -1.94
CNOT1-201ENST00000317147 SPRR1AP35321 89 aa2.93□□□□□ -1.94
CNOT1-201ENST00000317147 A0A096LNT2 108 aa2.93□□□□□ -1.94
CNOT1-201ENST00000317147 OXTP01178 125 aa2.93□□□□□ -1.94
CNOT1-201ENST00000317147 SPRR1BP22528 89 aa2.93□□□□□ -1.94
CNOT1-201ENST00000317147 COX6B2Q6YFQ2 88 aa2.93□□□□□ -1.94
CNOT1-201ENST00000317147 A0A1W2PNM2 257 aa2.92□□□□□ -1.94
CNOT1-201ENST00000317147 ST20-AS1Q8NBB2 130 aa2.92□□□□□ -1.94
CNOT1-201ENST00000317147 Q6ZR54 194 aa2.92□□□□□ -1.94
CNOT1-201ENST00000317147 M0R2N4 97 aa2.91□□□□□ -1.94
CNOT1-201ENST00000317147 CMYA5Q8N3K9 4069 aa2.91□□□□□ -1.94
CNOT1-201ENST00000317147 FRAS1Q86XX4 4008 aa2.91□□□□□ -1.94
CNOT1-201ENST00000317147 HECTD4Q9Y4D8 3996 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms