RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 IGLV7-46A0A075B6I9 117 aa5.58□□□□□ -1.52
USF3-201ENST00000316407 HRES1P13985 223 aa5.57□□□□□ -1.52
USF3-201ENST00000316407 CASC10Q5T4H9 136 aa5.57□□□□□ -1.52
USF3-201ENST00000316407 NSD1Q96L73 2696 aaPredicted RBP5.57□□□□□ -1.52
USF3-201ENST00000316407 PRR34Q9NV39 138 aa5.57□□□□□ -1.52
USF3-201ENST00000316407 TEP1Q99973 2627 aaKnown RBP5.56□□□□□ -1.52
USF3-201ENST00000316407 ITPR1Q14643 2758 aa5.56□□□□□ -1.52
USF3-201ENST00000316407 CAMK2N1Q7Z7J9 78 aa5.56□□□□□ -1.52
USF3-201ENST00000316407 GIG44P09565 113 aaPredicted RBP5.55□□□□□ -1.52
USF3-201ENST00000316407 SPRR4Q96PI1 79 aa5.55□□□□□ -1.52
USF3-201ENST00000316407 TRIOO75962 3097 aa5.55□□□□□ -1.52
USF3-201ENST00000316407 PSORS1C2Q9UIG4 136 aa5.55□□□□□ -1.52
USF3-201ENST00000316407 LAMA3Q16787 3333 aa5.55□□□□□ -1.52
USF3-201ENST00000316407 LINC01558Q9Y6Z2 57 aa5.55□□□□□ -1.52
USF3-201ENST00000316407 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
USF3-201ENST00000316407 J3QL48 77 aa5.54□□□□□ -1.52
USF3-201ENST00000316407 KRTAP10-11P60412 298 aa5.53□□□□□ -1.52
USF3-201ENST00000316407 CNBPP62633 177 aaKnown RBP5.53□□□□□ -1.52
USF3-201ENST00000316407 UTP20O75691 2785 aaKnown RBP5.53□□□□□ -1.52
USF3-201ENST00000316407 LRBAP50851 2863 aa5.53□□□□□ -1.52
USF3-201ENST00000316407 C10orf142B7Z368 130 aa5.53□□□□□ -1.52
USF3-201ENST00000316407 TLX1NBP0CAT3 122 aa5.52□□□□□ -1.53
USF3-201ENST00000316407 IGLV7-43P04211 117 aa5.51□□□□□ -1.53
USF3-201ENST00000316407 UNC80Q8N2C7 3258 aa5.51□□□□□ -1.53
USF3-201ENST00000316407 A0A096LNT2 108 aa5.5□□□□□ -1.53
USF3-201ENST00000316407 REV3LO60673 3130 aa5.48□□□□□ -1.53
USF3-201ENST00000316407 FRYQ5TBA9 3013 aa5.48□□□□□ -1.53
USF3-201ENST00000316407 MGAQ8IWI9 3026 aa5.48□□□□□ -1.53
USF3-201ENST00000316407 SETXQ7Z333 2677 aaKnown RBP5.47□□□□□ -1.53
USF3-201ENST00000316407 KRTAP24-1Q3LI83 254 aa5.47□□□□□ -1.53
USF3-201ENST00000316407 A0A087WTM6 91 aa5.46□□□□□ -1.54
USF3-201ENST00000316407 KRTAP16-1A8MUX0 517 aa5.45□□□□□ -1.54
USF3-201ENST00000316407 ZNF292O60281 2723 aa5.44□□□□□ -1.54
USF3-201ENST00000316407 Q8NDZ9 215 aa5.44□□□□□ -1.54
USF3-201ENST00000316407 C19orf73Q9NVV2 129 aa5.44□□□□□ -1.54
USF3-201ENST00000316407 MMP24-AS1A0A0U1RRL7 71 aa5.44□□□□□ -1.54
USF3-201ENST00000316407 ROMO1P60602 79 aa5.43□□□□□ -1.54
USF3-201ENST00000316407 S4R3F8 94 aa5.43□□□□□ -1.54
USF3-201ENST00000316407 KALRNO60229 2985 aa5.43□□□□□ -1.54
USF3-201ENST00000316407 SZT2Q5T011 3432 aa5.42□□□□□ -1.54
USF3-201ENST00000316407 Q5W150 140 aa5.42□□□□□ -1.54
USF3-201ENST00000316407 UBR5O95071 2799 aaPredicted RBP5.42□□□□□ -1.54
USF3-201ENST00000316407 LINC00612Q8N6U2 182 aa5.41□□□□□ -1.54
USF3-201ENST00000316407 PRUNE2Q8WUY3 3088 aa5.41□□□□□ -1.54
USF3-201ENST00000316407 ITPR2Q14571 2701 aa5.41□□□□□ -1.54
USF3-201ENST00000316407 KLK9Q2XQG4 91 aa5.4□□□□□ -1.54
USF3-201ENST00000316407 K7EIL1 84 aa5.4□□□□□ -1.55
USF3-201ENST00000316407 WDFY4Q6ZS81 3184 aa5.4□□□□□ -1.55
USF3-201ENST00000316407 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
USF3-201ENST00000316407 ASH1LQ9NR48 2969 aaKnown RBP5.39□□□□□ -1.55
USF3-201ENST00000316407 KRTAP10-3P60369 221 aa5.39□□□□□ -1.55
USF3-201ENST00000316407 WDFY3Q8IZQ1 3526 aa5.38□□□□□ -1.55
USF3-201ENST00000316407 CHD7Q9P2D1 2997 aa5.37□□□□□ -1.55
USF3-201ENST00000316407 VCANP13611 3396 aa5.37□□□□□ -1.55
USF3-201ENST00000316407 Q6ZSA8 131 aa5.37□□□□□ -1.55
USF3-201ENST00000316407 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
USF3-201ENST00000316407 R4GN34 69 aa5.36□□□□□ -1.55
USF3-201ENST00000316407 M0R2T5 61 aa5.36□□□□□ -1.55
USF3-201ENST00000316407 ADM2Q7Z4H4 148 aa5.35□□□□□ -1.55
USF3-201ENST00000316407 ZCCHC13Q8WW36 166 aaKnown RBP5.35□□□□□ -1.55
USF3-201ENST00000316407 NBEAQ8NFP9 2946 aa5.34□□□□□ -1.55
USF3-201ENST00000316407 NDUFAF8A1L188 74 aa5.34□□□□□ -1.55
USF3-201ENST00000316407 H1FX-AS1Q4G0G2 97 aa5.33□□□□□ -1.56
USF3-201ENST00000316407 WWC2-AS2Q96NR7 200 aa5.33□□□□□ -1.56
USF3-201ENST00000316407 RPL37P61927 97 aaKnown RBP5.32□□□□□ -1.56
USF3-201ENST00000316407 LINC00472Q9H8W2 130 aa5.32□□□□□ -1.56
USF3-201ENST00000316407 HTTP42858 3142 aa5.32□□□□□ -1.56
USF3-201ENST00000316407 COL6A3P12111 3177 aa5.32□□□□□ -1.56
USF3-201ENST00000316407 A6NN06 94 aa5.31□□□□□ -1.56
USF3-201ENST00000316407 A8MU10 97 aa5.31□□□□□ -1.56
USF3-201ENST00000316407 USP34Q70CQ2 3546 aa5.31□□□□□ -1.56
USF3-201ENST00000316407 TACC2O95359 2948 aa5.31□□□□□ -1.56
USF3-201ENST00000316407 MYO15AQ9UKN7 3530 aa5.3□□□□□ -1.56
USF3-201ENST00000316407 HIVEP1P15822 2718 aa5.3□□□□□ -1.56
USF3-201ENST00000316407 M0QZ58 72 aa5.29□□□□□ -1.56
USF3-201ENST00000316407 COL12A1Q99715 3063 aa5.29□□□□□ -1.56
USF3-201ENST00000316407 FRYLO94915 3013 aa5.29□□□□□ -1.56
USF3-201ENST00000316407 IGSF10Q6WRI0 2623 aa5.28□□□□□ -1.56
USF3-201ENST00000316407 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
USF3-201ENST00000316407 KMT2BQ9UMN6 2715 aaPredicted RBP5.26□□□□□ -1.57
USF3-201ENST00000316407 KRTAP26-1Q6PEX3 210 aa5.25□□□□□ -1.57
USF3-201ENST00000316407 DMXL2Q8TDJ6 3036 aa5.25□□□□□ -1.57
USF3-201ENST00000316407 LAMA1P25391 3075 aa5.24□□□□□ -1.57
USF3-201ENST00000316407 TNP2Q05952 138 aa5.24□□□□□ -1.57
USF3-201ENST00000316407 CHD9Q3L8U1 2897 aa5.23□□□□□ -1.57
USF3-201ENST00000316407 ASB16-AS1Q495Z4 193 aa5.19□□□□□ -1.58
USF3-201ENST00000316407 C20orf166-AS1Q96NR2 134 aa5.19□□□□□ -1.58
USF3-201ENST00000316407 ASPMQ8IZT6 3477 aa5.19□□□□□ -1.58
USF3-201ENST00000316407 SPRR1AP35321 89 aa5.18□□□□□ -1.58
USF3-201ENST00000316407 Q6ZR54 194 aa5.18□□□□□ -1.58
USF3-201ENST00000316407 PLAC4Q8WY50 150 aa5.18□□□□□ -1.58
USF3-201ENST00000316407 BOD1L1Q8NFC6 3051 aa5.17□□□□□ -1.58
USF3-201ENST00000316407 SPTBN5Q9NRC6 3674 aaKnown RBP5.17□□□□□ -1.58
USF3-201ENST00000316407 SPEGQ15772 3267 aa5.16□□□□□ -1.58
USF3-201ENST00000316407 CFAP47Q6ZTR5 3102 aa5.16□□□□□ -1.58
USF3-201ENST00000316407 A0A087X002 238 aa5.15□□□□□ -1.58
USF3-201ENST00000316407 NOTCH2NLQ7Z3S9 236 aa5.15□□□□□ -1.58
USF3-201ENST00000316407 ZZEF1O43149 2961 aa5.14□□□□□ -1.59
USF3-201ENST00000316407 PLAC8Q9NZF1 115 aa5.14□□□□□ -1.59
USF3-201ENST00000316407 PANO1I0J062 215 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms