RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 Q8NBF4 154 aa8.25□□□□□ -1.09
RETREG3-201ENST00000309428 REG3GQ6UW15 175 aa8.24□□□□□ -1.09
RETREG3-201ENST00000309428 LINC00476Q8WZB0 136 aa8.24□□□□□ -1.09
RETREG3-201ENST00000309428 ERC2-IT1O76042 136 aa8.24□□□□□ -1.09
RETREG3-201ENST00000309428 Q9BRP9 147 aa8.24□□□□□ -1.09
RETREG3-201ENST00000309428 A0A1W2PNM2 257 aa8.23□□□□□ -1.09
RETREG3-201ENST00000309428 WIPF1O43516 503 aa8.23□□□□□ -1.09
RETREG3-201ENST00000309428 Q6ZRX8 168 aa8.23□□□□□ -1.09
RETREG3-201ENST00000309428 B9D2Q9BPU9 175 aa8.23□□□□□ -1.09
RETREG3-201ENST00000309428 K7EIL1 84 aa8.22□□□□□ -1.09
RETREG3-201ENST00000309428 OCR1Q9BZK8 76 aa8.21□□□□□ -1.09
RETREG3-201ENST00000309428 EPM2AB3EWF7 344 aa8.2□□□□□ -1.1
RETREG3-201ENST00000309428 TRAV22A0A0B4J277 110 aa8.19□□□□□ -1.1
RETREG3-201ENST00000309428 LINC01556Q5JQF7 62 aa8.19□□□□□ -1.1
RETREG3-201ENST00000309428 GVQW2A0A096LPI5 108 aaPredicted RBP8.19□□□□□ -1.1
RETREG3-201ENST00000309428 SPAG11AQ6PDA7 123 aa8.19□□□□□ -1.1
RETREG3-201ENST00000309428 DNAH10OSP0CZ25 163 aa8.18□□□□□ -1.1
RETREG3-201ENST00000309428 IGHV6-1A0A0B4J1U7 121 aa8.17□□□□□ -1.1
RETREG3-201ENST00000309428 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
RETREG3-201ENST00000309428 MDFIQ99750 246 aa8.14□□□□□ -1.11
RETREG3-201ENST00000309428 KCNQ1DNQ9H478 68 aa8.14□□□□□ -1.11
RETREG3-201ENST00000309428 ANK2Q01484 3957 aa8.14□□□□□ -1.11
RETREG3-201ENST00000309428 hDV103S1A0JD37 113 aa8.13□□□□□ -1.11
RETREG3-201ENST00000309428 PHF5AQ7RTV0 110 aaKnown RBP8.13□□□□□ -1.11
RETREG3-201ENST00000309428 IGFL1Q6UW32 110 aa8.12□□□□□ -1.11
RETREG3-201ENST00000309428 DSCR10P59022 87 aa8.11□□□□□ -1.11
RETREG3-201ENST00000309428 KRTAP1-5Q9BYS1 174 aa8.11□□□□□ -1.11
RETREG3-201ENST00000309428 IGLV1-50A0A075B6I6 118 aa8.1□□□□□ -1.11
RETREG3-201ENST00000309428 KRTAP26-1Q6PEX3 210 aa8.1□□□□□ -1.11
RETREG3-201ENST00000309428 IGLV5-48A0A075B6I7 105 aa8.05□□□□□ -1.12
RETREG3-201ENST00000309428 ANAPC11Q9NYG5 84 aa8.05□□□□□ -1.12
RETREG3-201ENST00000309428 H3BNG1 76 aa8.04□□□□□ -1.12
RETREG3-201ENST00000309428 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
RETREG3-201ENST00000309428 A8MU10 97 aa8.03□□□□□ -1.12
RETREG3-201ENST00000309428 COA5Q86WW8 74 aa8.03□□□□□ -1.12
RETREG3-201ENST00000309428 F8WDY8 70 aa8□□□□□ -1.13
RETREG3-201ENST00000309428 LY6G6CO95867 125 aa8□□□□□ -1.13
RETREG3-201ENST00000309428 CIRBP-AS1Q8TBR5 109 aa8□□□□□ -1.13
RETREG3-201ENST00000309428 PRR15Q8IV56 129 aa7.98□□□□□ -1.13
RETREG3-201ENST00000309428 MOBPQ13875 183 aa7.97□□□□□ -1.13
RETREG3-201ENST00000309428 SPINK1P00995 79 aa7.97□□□□□ -1.13
RETREG3-201ENST00000309428 KRTAP7-1Q8IUC3 87 aa7.97□□□□□ -1.13
RETREG3-201ENST00000309428 LYSTQ99698 3801 aa7.97□□□□□ -1.13
RETREG3-201ENST00000309428 FBN3Q75N90 2809 aa7.96□□□□□ -1.13
RETREG3-201ENST00000309428 IGLV8-61A0A075B6I0 122 aa7.96□□□□□ -1.14
RETREG3-201ENST00000309428 A8MWP4 228 aa7.95□□□□□ -1.14
RETREG3-201ENST00000309428 PANO1I0J062 215 aa7.95□□□□□ -1.14
RETREG3-201ENST00000309428 C14orf177Q52M58 125 aa7.94□□□□□ -1.14
RETREG3-201ENST00000309428 KRTAP11-1Q8IUC1 163 aa7.94□□□□□ -1.14
RETREG3-201ENST00000309428 A0A1B0GW54 56 aa7.94□□□□□ -1.14
RETREG3-201ENST00000309428 Q1T7F1 81 aa7.93□□□□□ -1.14
RETREG3-201ENST00000309428 DMBT1Q9UGM3 2413 aaPredicted RBP7.93□□□□□ -1.14
RETREG3-201ENST00000309428 DNAH10Q8IVF4 4471 aa7.92□□□□□ -1.14
RETREG3-201ENST00000309428 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
RETREG3-201ENST00000309428 SPRR4Q96PI1 79 aa7.91□□□□□ -1.14
RETREG3-201ENST00000309428 C16orf90A8MZG2 172 aa7.91□□□□□ -1.14
RETREG3-201ENST00000309428 NBDYA0A0U1RRE5 68 aa7.89□□□□□ -1.15
RETREG3-201ENST00000309428 Q5VV11 94 aa7.89□□□□□ -1.15
RETREG3-201ENST00000309428 Q8N9P0 234 aaPredicted RBP7.89□□□□□ -1.15
RETREG3-201ENST00000309428 LOC101927531A0A1B0GV80 90 aa7.89□□□□□ -1.15
RETREG3-201ENST00000309428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.88□□□□□ -1.15
RETREG3-201ENST00000309428 APLNQ9ULZ1 77 aa7.87□□□□□ -1.15
RETREG3-201ENST00000309428 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
RETREG3-201ENST00000309428 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
RETREG3-201ENST00000309428 CNBPP62633 177 aaKnown RBP7.86□□□□□ -1.15
RETREG3-201ENST00000309428 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
RETREG3-201ENST00000309428 CD164Q04900 197 aa7.85□□□□□ -1.15
RETREG3-201ENST00000309428 CYP4F30PQ9H0H9 118 aa7.85□□□□□ -1.15
RETREG3-201ENST00000309428 KTN1-AS1Q86SY8 53 aa7.84□□□□□ -1.15
RETREG3-201ENST00000309428 C8orf17Q9NRJ1 99 aa7.83□□□□□ -1.16
RETREG3-201ENST00000309428 H3BPC8 53 aa7.82□□□□□ -1.16
RETREG3-201ENST00000309428 TNP2Q05952 138 aa7.82□□□□□ -1.16
RETREG3-201ENST00000309428 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
RETREG3-201ENST00000309428 ATP11AUNQ6ZP68 121 aa7.82□□□□□ -1.16
RETREG3-201ENST00000309428 A0A1B0GU69 56 aa7.81□□□□□ -1.16
RETREG3-201ENST00000309428 MEGF8Q7Z7M0 2845 aa7.81□□□□□ -1.16
RETREG3-201ENST00000309428 IGLV5-52A0A0A0MRZ9 124 aa7.81□□□□□ -1.16
RETREG3-201ENST00000309428 SPRR1AP35321 89 aa7.81□□□□□ -1.16
RETREG3-201ENST00000309428 PRAC1Q96KF2 57 aa7.81□□□□□ -1.16
RETREG3-201ENST00000309428 TP53AIP1Q9HCN2 124 aa7.8□□□□□ -1.16
RETREG3-201ENST00000309428 PLA2G2DQ9UNK4 145 aa7.8□□□□□ -1.16
RETREG3-201ENST00000309428 NUPR2A6NF83 97 aa7.8□□□□□ -1.16
RETREG3-201ENST00000309428 RTL8CO15255 209 aa7.79□□□□□ -1.16
RETREG3-201ENST00000309428 HUWE1Q7Z6Z7 4374 aaKnown RBP7.79□□□□□ -1.16
RETREG3-201ENST00000309428 KRTAP4-16G5E9R7 235 aaPredicted RBP7.79□□□□□ -1.16
RETREG3-201ENST00000309428 MRPL34Q9BQ48 92 aaKnown RBP7.79□□□□□ -1.16
RETREG3-201ENST00000309428 C9orf163Q8N9P6 203 aa7.79□□□□□ -1.16
RETREG3-201ENST00000309428 ZCCHC13Q8WW36 166 aaKnown RBP7.79□□□□□ -1.16
RETREG3-201ENST00000309428 SPINK7P58062 85 aa7.78□□□□□ -1.16
RETREG3-201ENST00000309428 FLG2Q5D862 2391 aaPredicted RBP7.78□□□□□ -1.16
RETREG3-201ENST00000309428 C4orf48Q5BLP8 95 aa7.77□□□□□ -1.16
RETREG3-201ENST00000309428 ZNF706Q9Y5V0 76 aaPredicted RBP7.77□□□□□ -1.16
RETREG3-201ENST00000309428 SPANXA2-OT1Q8N9U9 137 aa7.76□□□□□ -1.17
RETREG3-201ENST00000309428 MMP24-AS1A0A0U1RRL7 71 aa7.75□□□□□ -1.17
RETREG3-201ENST00000309428 LCA10Q71F78 164 aa7.75□□□□□ -1.17
RETREG3-201ENST00000309428 IGLV5-37A0A075B6J1 123 aa7.74□□□□□ -1.17
RETREG3-201ENST00000309428 ACYP2P14621 99 aa7.74□□□□□ -1.17
RETREG3-201ENST00000309428 A0A087WTM6 91 aa7.74□□□□□ -1.17
RETREG3-201ENST00000309428 SPACA4Q8TDM5 124 aa7.74□□□□□ -1.17
RETREG3-201ENST00000309428 PSORS1C2Q9UIG4 136 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms