RNA–Protein interactions for RNA: ENST00000308580.11

TMOD3-201, Transcript of tropomodulin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMOD3, Length 8,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-201ENST00000308580 CELSR3Q9NYQ7 3312 aa6.24□□□□□ -1.41
TMOD3-201ENST00000308580 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.24□□□□□ -1.41
TMOD3-201ENST00000308580 ITPR1Q14643 2758 aa6.23□□□□□ -1.41
TMOD3-201ENST00000308580 ATMQ13315 3056 aa6.23□□□□□ -1.41
TMOD3-201ENST00000308580 CYP4F30PQ9H0H9 118 aa6.23□□□□□ -1.41
TMOD3-201ENST00000308580 LAMA1P25391 3075 aa6.22□□□□□ -1.41
TMOD3-201ENST00000308580 SZT2Q5T011 3432 aa6.22□□□□□ -1.41
TMOD3-201ENST00000308580 OCR1Q9BZK8 76 aa6.22□□□□□ -1.41
TMOD3-201ENST00000308580 LINC00336Q6ZUF6 198 aa6.21□□□□□ -1.42
TMOD3-201ENST00000308580 UQCR11O14957 56 aa6.2□□□□□ -1.42
TMOD3-201ENST00000308580 VCANP13611 3396 aa6.2□□□□□ -1.42
TMOD3-201ENST00000308580 FRYLO94915 3013 aa6.19□□□□□ -1.42
TMOD3-201ENST00000308580 KALRNO60229 2985 aa6.19□□□□□ -1.42
TMOD3-201ENST00000308580 J3QL48 77 aa6.18□□□□□ -1.42
TMOD3-201ENST00000308580 COL12A1Q99715 3063 aa6.18□□□□□ -1.42
TMOD3-201ENST00000308580 SPRR1AP35321 89 aa6.17□□□□□ -1.42
TMOD3-201ENST00000308580 BAHCC1Q9P281 2608 aa6.17□□□□□ -1.42
TMOD3-201ENST00000308580 DMXL2Q8TDJ6 3036 aa6.17□□□□□ -1.42
TMOD3-201ENST00000308580 SPANXA2-OT1Q8N9U9 137 aa6.16□□□□□ -1.42
TMOD3-201ENST00000308580 ADGRG4Q8IZF6 3080 aa6.16□□□□□ -1.42
TMOD3-201ENST00000308580 STAB2Q8WWQ8 2551 aa6.16□□□□□ -1.42
TMOD3-201ENST00000308580 BOD1L1Q8NFC6 3051 aa6.15□□□□□ -1.42
TMOD3-201ENST00000308580 KRTAP1-5Q9BYS1 174 aa6.14□□□□□ -1.43
TMOD3-201ENST00000308580 Q8N1X5 172 aa6.14□□□□□ -1.43
TMOD3-201ENST00000308580 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
TMOD3-201ENST00000308580 KRTAP26-1Q6PEX3 210 aa6.13□□□□□ -1.43
TMOD3-201ENST00000308580 PRR26Q8N8Z3 221 aa6.12□□□□□ -1.43
TMOD3-201ENST00000308580 CD164Q04900 197 aa6.11□□□□□ -1.43
TMOD3-201ENST00000308580 PLAC8Q9NZF1 115 aa6.1□□□□□ -1.43
TMOD3-201ENST00000308580 ITPR2Q14571 2701 aa6.1□□□□□ -1.43
TMOD3-201ENST00000308580 REV3LO60673 3130 aa6.1□□□□□ -1.43
TMOD3-201ENST00000308580 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.43
TMOD3-201ENST00000308580 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
TMOD3-201ENST00000308580 MMP24-AS1A0A0U1RRL7 71 aa6.08□□□□□ -1.44
TMOD3-201ENST00000308580 ASH1LQ9NR48 2969 aaKnown RBP6.07□□□□□ -1.44
TMOD3-201ENST00000308580 ZZEF1O43149 2961 aa6.07□□□□□ -1.44
TMOD3-201ENST00000308580 SPRR1BP22528 89 aa6.07□□□□□ -1.44
TMOD3-201ENST00000308580 DNAH14Q0VDD8 3507 aa6.07□□□□□ -1.44
TMOD3-201ENST00000308580 UTP20O75691 2785 aaKnown RBP6.06□□□□□ -1.44
TMOD3-201ENST00000308580 IGLV7-46A0A075B6I9 117 aa6.05□□□□□ -1.44
TMOD3-201ENST00000308580 LRBAP50851 2863 aa6.05□□□□□ -1.44
TMOD3-201ENST00000308580 HRES1P13985 223 aa6.04□□□□□ -1.44
TMOD3-201ENST00000308580 FAM229BQ4G0N7 80 aa6.04□□□□□ -1.44
TMOD3-201ENST00000308580 LINC00472Q9H8W2 130 aa6.04□□□□□ -1.44
TMOD3-201ENST00000308580 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
TMOD3-201ENST00000308580 COL6A3P12111 3177 aa6.02□□□□□ -1.45
TMOD3-201ENST00000308580 Q1T7F1 81 aa6.02□□□□□ -1.45
TMOD3-201ENST00000308580 HIVEP1P15822 2718 aa6.02□□□□□ -1.45
TMOD3-201ENST00000308580 FLG2Q5D862 2391 aaPredicted RBP6.01□□□□□ -1.45
TMOD3-201ENST00000308580 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
TMOD3-201ENST00000308580 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
TMOD3-201ENST00000308580 RBM12B-AS1Q9P1G2 102 aa6.01□□□□□ -1.45
TMOD3-201ENST00000308580 NIPBLQ6KC79 2804 aaeCLIP6□□□□□ -1.45
TMOD3-201ENST00000308580 A0A0D9SG42 100 aa6□□□□□ -1.45
TMOD3-201ENST00000308580 ZANQ9Y493 2812 aa5.98□□□□□ -1.45
TMOD3-201ENST00000308580 CELSR2Q9HCU4 2923 aa5.98□□□□□ -1.45
TMOD3-201ENST00000308580 KMT2BQ9UMN6 2715 aaPredicted RBP5.98□□□□□ -1.45
TMOD3-201ENST00000308580 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
TMOD3-201ENST00000308580 LINC01554Q52M75 96 aa5.98□□□□□ -1.45
TMOD3-201ENST00000308580 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
TMOD3-201ENST00000308580 PANO1I0J062 215 aa5.97□□□□□ -1.45
TMOD3-201ENST00000308580 KRTAP4-16G5E9R7 235 aaPredicted RBP5.97□□□□□ -1.45
TMOD3-201ENST00000308580 CFAP47Q6ZTR5 3102 aa5.97□□□□□ -1.45
TMOD3-201ENST00000308580 FP248Q71RG6 208 aaPredicted RBP5.96□□□□□ -1.45
TMOD3-201ENST00000308580 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.46
TMOD3-201ENST00000308580 KRTAP10-2P60368 255 aa5.95□□□□□ -1.46
TMOD3-201ENST00000308580 Q5XG85 94 aa5.95□□□□□ -1.46
TMOD3-201ENST00000308580 ZCCHC13Q8WW36 166 aaKnown RBP5.95□□□□□ -1.46
TMOD3-201ENST00000308580 EYSQ5T1H1 3165 aa5.94□□□□□ -1.46
TMOD3-201ENST00000308580 KRTAP10-1P60331 282 aa5.94□□□□□ -1.46
TMOD3-201ENST00000308580 Q5W150 140 aa5.94□□□□□ -1.46
TMOD3-201ENST00000308580 APCP25054 2843 aa5.94□□□□□ -1.46
TMOD3-201ENST00000308580 Q6ZSA8 131 aa5.94□□□□□ -1.46
TMOD3-201ENST00000308580 TENM4Q6N022 2769 aa5.93□□□□□ -1.46
TMOD3-201ENST00000308580 LCA10Q71F78 164 aa5.92□□□□□ -1.46
TMOD3-201ENST00000308580 LINC01558Q9Y6Z2 57 aa5.92□□□□□ -1.46
TMOD3-201ENST00000308580 Q75L30 129 aa5.91□□□□□ -1.46
TMOD3-201ENST00000308580 SPEGQ15772 3267 aa5.91□□□□□ -1.46
TMOD3-201ENST00000308580 A0A1B0GU33 70 aa5.9□□□□□ -1.46
TMOD3-201ENST00000308580 DCHS2Q6V1P9 2916 aa5.9□□□□□ -1.47
TMOD3-201ENST00000308580 LINC00483Q53H64 154 aa5.88□□□□□ -1.47
TMOD3-201ENST00000308580 OXTP01178 125 aa5.88□□□□□ -1.47
TMOD3-201ENST00000308580 Q6ZR54 194 aa5.88□□□□□ -1.47
TMOD3-201ENST00000308580 SPINK7P58062 85 aa5.87□□□□□ -1.47
TMOD3-201ENST00000308580 DMXL1Q9Y485 3027 aa5.87□□□□□ -1.47
TMOD3-201ENST00000308580 Q5VV11 94 aa5.85□□□□□ -1.47
TMOD3-201ENST00000308580 KRTAP11-1Q8IUC1 163 aa5.85□□□□□ -1.47
TMOD3-201ENST00000308580 LCE6AA0A183 80 aa5.85□□□□□ -1.47
TMOD3-201ENST00000308580 KRTAP29-1A8MX34 341 aaPredicted RBP5.85□□□□□ -1.47
TMOD3-201ENST00000308580 CRYBG3Q68DQ2 2970 aa5.84□□□□□ -1.48
TMOD3-201ENST00000308580 KRTAP7-1Q8IUC3 87 aa5.83□□□□□ -1.48
TMOD3-201ENST00000308580 TNRC18O15417 2968 aaPredicted RBP5.83□□□□□ -1.48
TMOD3-201ENST00000308580 NF1P21359 2839 aa5.83□□□□□ -1.48
TMOD3-201ENST00000308580 A0A087X002 238 aa5.82□□□□□ -1.48
TMOD3-201ENST00000308580 Q5VSD8 79 aa5.81□□□□□ -1.48
TMOD3-201ENST00000308580 Q6ZRN7 208 aaPredicted RBP5.81□□□□□ -1.48
TMOD3-201ENST00000308580 CSAG1Q6PB30 78 aa5.8□□□□□ -1.48
TMOD3-201ENST00000308580 HRNRQ86YZ3 2850 aaPredicted RBP5.79□□□□□ -1.48
TMOD3-201ENST00000308580 FBN2P35556 2912 aa5.79□□□□□ -1.48
TMOD3-201ENST00000308580 NOTCH2NLQ7Z3S9 236 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms