RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 A0A1B0GVY2 172 aa9.63□□□□□ -0.87
HERPUD1-201ENST00000300302 ZNF861PO60384 105 aa9.62□□□□□ -0.87
HERPUD1-201ENST00000300302 SPRR1BP22528 89 aa9.62□□□□□ -0.87
HERPUD1-201ENST00000300302 SMIM29Q86T20 159 aa9.62□□□□□ -0.87
HERPUD1-201ENST00000300302 LINC00846Q9NV44 126 aa9.62□□□□□ -0.87
HERPUD1-201ENST00000300302 DNAH8Q96JB1 4490 aa9.61□□□□□ -0.87
HERPUD1-201ENST00000300302 LINC00643Q86TS7 51 aa9.6□□□□□ -0.87
HERPUD1-201ENST00000300302 ZNF706Q9Y5V0 76 aaPredicted RBP9.6□□□□□ -0.87
HERPUD1-201ENST00000300302 IGLV7-43P04211 117 aa9.59□□□□□ -0.87
HERPUD1-201ENST00000300302 HAMPP81172 84 aa9.57□□□□□ -0.88
HERPUD1-201ENST00000300302 Q6Q795 121 aa9.57□□□□□ -0.88
HERPUD1-201ENST00000300302 TRBV7-7A0A0K0K1E9 115 aa9.57□□□□□ -0.88
HERPUD1-201ENST00000300302 SPRR4Q96PI1 79 aa9.57□□□□□ -0.88
HERPUD1-201ENST00000300302 UBL5Q9BZL1 73 aa9.57□□□□□ -0.88
HERPUD1-201ENST00000300302 PKHD1P08F94 4074 aa9.56□□□□□ -0.88
HERPUD1-201ENST00000300302 IGLV8-61A0A075B6I0 122 aa9.55□□□□□ -0.88
HERPUD1-201ENST00000300302 DYNC1H1Q14204 4646 aaKnown RBP9.55□□□□□ -0.88
HERPUD1-201ENST00000300302 LRP1BQ9NZR2 4599 aa9.54□□□□□ -0.88
HERPUD1-201ENST00000300302 A0A1B0GW54 56 aa9.54□□□□□ -0.88
HERPUD1-201ENST00000300302 LINC00483Q53H64 154 aa9.53□□□□□ -0.88
HERPUD1-201ENST00000300302 Q6JHZ5 121 aa9.52□□□□□ -0.89
HERPUD1-201ENST00000300302 Q8NBF4 154 aa9.52□□□□□ -0.89
HERPUD1-201ENST00000300302 SRRM2Q9UQ35 2752 aaKnown RBP9.51□□□□□ -0.89
HERPUD1-201ENST00000300302 A0A1W2PNM2 257 aa9.51□□□□□ -0.89
HERPUD1-201ENST00000300302 IGFL1Q6UW32 110 aa9.51□□□□□ -0.89
HERPUD1-201ENST00000300302 IMUPQ9GZP8 106 aa9.51□□□□□ -0.89
HERPUD1-201ENST00000300302 ATP5EP2Q5VTU8 51 aa9.49□□□□□ -0.89
HERPUD1-201ENST00000300302 Q6ZVQ6 151 aa9.49□□□□□ -0.89
HERPUD1-201ENST00000300302 CRYGAP11844 174 aa9.47□□□□□ -0.89
HERPUD1-201ENST00000300302 IGLV9-49A0A0B4J1Y8 123 aa9.46□□□□□ -0.9
HERPUD1-201ENST00000300302 C9orf153Q5TBE3 101 aa9.46□□□□□ -0.9
HERPUD1-201ENST00000300302 RPL37AP61513 92 aaKnown RBP9.45□□□□□ -0.9
HERPUD1-201ENST00000300302 IGKV3D-7A0A0C4DH55 119 aa9.45□□□□□ -0.9
HERPUD1-201ENST00000300302 NREPQ16612 68 aa9.45□□□□□ -0.9
HERPUD1-201ENST00000300302 A0A0G2JQZ4 141 aa9.44□□□□□ -0.9
HERPUD1-201ENST00000300302 APOBP04114 4563 aaKnown RBP9.42□□□□□ -0.9
HERPUD1-201ENST00000300302 ANAPC11Q9NYG5 84 aa9.42□□□□□ -0.9
HERPUD1-201ENST00000300302 CXCL6P80162 114 aa9.4□□□□□ -0.9
HERPUD1-201ENST00000300302 MOBPQ13875 183 aa9.4□□□□□ -0.91
HERPUD1-201ENST00000300302 FAM236AA0A1B0GUQ0 79 aa9.39□□□□□ -0.91
HERPUD1-201ENST00000300302 FAM236BA0A1B0GV22 79 aa9.39□□□□□ -0.91
HERPUD1-201ENST00000300302 ANAPC13Q9BS18 74 aa9.38□□□□□ -0.91
HERPUD1-201ENST00000300302 A0A087WSZ3 146 aa9.37□□□□□ -0.91
HERPUD1-201ENST00000300302 SMR3BP02814 79 aaPredicted RBP9.36□□□□□ -0.91
HERPUD1-201ENST00000300302 HIST1H4AP62805 103 aaKnown RBP9.36□□□□□ -0.91
HERPUD1-201ENST00000300302 BPY2O14599 106 aa9.36□□□□□ -0.91
HERPUD1-201ENST00000300302 FAM229BQ4G0N7 80 aa9.35□□□□□ -0.91
HERPUD1-201ENST00000300302 SPINK6Q6UWN8 80 aa9.35□□□□□ -0.91
HERPUD1-201ENST00000300302 A0A087WVE0 104 aa9.34□□□□□ -0.91
HERPUD1-201ENST00000300302 EPPK1P58107 5090 aaKnown RBP9.33□□□□□ -0.92
HERPUD1-201ENST00000300302 SSBP3-AS1Q7Z2R9 100 aa9.32□□□□□ -0.92
HERPUD1-201ENST00000300302 VPS13BQ7Z7G8 4022 aa9.3□□□□□ -0.92
HERPUD1-201ENST00000300302 KRTAP1-4P0C5Y4 121 aa9.29□□□□□ -0.92
HERPUD1-201ENST00000300302 HRCT1Q6UXD1 115 aa9.29□□□□□ -0.92
HERPUD1-201ENST00000300302 A0A087X002 238 aa9.28□□□□□ -0.92
HERPUD1-201ENST00000300302 SS18L2Q9UHA2 77 aa9.28□□□□□ -0.92
HERPUD1-201ENST00000300302 PLA2G1BP04054 148 aaKnown RBP9.27□□□□□ -0.93
HERPUD1-201ENST00000300302 CD164Q04900 197 aa9.26□□□□□ -0.93
HERPUD1-201ENST00000300302 FAT1Q14517 4588 aa9.26□□□□□ -0.93
HERPUD1-201ENST00000300302 CDK2AP2O75956 126 aa9.25□□□□□ -0.93
HERPUD1-201ENST00000300302 ATOX1O00244 68 aa9.25□□□□□ -0.93
HERPUD1-201ENST00000300302 KRTAP13-2Q52LG2 175 aa9.25□□□□□ -0.93
HERPUD1-201ENST00000300302 KRTAP10-4P60372 401 aaPredicted RBP9.24□□□□□ -0.93
HERPUD1-201ENST00000300302 HSPG2P98160 4391 aa9.24□□□□□ -0.93
HERPUD1-201ENST00000300302 FAM229AH3BQW9 127 aa9.23□□□□□ -0.93
HERPUD1-201ENST00000300302 RYR1P21817 5038 aa9.23□□□□□ -0.93
HERPUD1-201ENST00000300302 IGKV4-1P06312 121 aa9.23□□□□□ -0.93
HERPUD1-201ENST00000300302 Q8N9L7 120 aa9.23□□□□□ -0.93
HERPUD1-201ENST00000300302 LINC00472Q9H8W2 130 aa9.23□□□□□ -0.93
HERPUD1-201ENST00000300302 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
HERPUD1-201ENST00000300302 DSCR10P59022 87 aa9.22□□□□□ -0.93
HERPUD1-201ENST00000300302 DEFB116Q30KQ4 102 aa9.22□□□□□ -0.93
HERPUD1-201ENST00000300302 J3KT08 172 aa9.21□□□□□ -0.94
HERPUD1-201ENST00000300302 TYMSOSQ8TAI1 123 aa9.19□□□□□ -0.94
HERPUD1-201ENST00000300302 K7EQZ3 153 aa9.17□□□□□ -0.94
HERPUD1-201ENST00000300302 A8MWP4 228 aa9.15□□□□□ -0.94
HERPUD1-201ENST00000300302 Q96NJ1 140 aa9.15□□□□□ -0.94
HERPUD1-201ENST00000300302 KRTAP17-1Q9BYP8 105 aa9.15□□□□□ -0.94
HERPUD1-201ENST00000300302 KIAA1109Q2LD37 5005 aa9.15□□□□□ -0.94
HERPUD1-201ENST00000300302 COX7CP15954 63 aa9.15□□□□□ -0.95
HERPUD1-201ENST00000300302 C4orf48Q5BLP8 95 aa9.15□□□□□ -0.95
HERPUD1-201ENST00000300302 UQCRQO14949 82 aa9.14□□□□□ -0.95
HERPUD1-201ENST00000300302 SERP2Q8N6R1 65 aa9.14□□□□□ -0.95
HERPUD1-201ENST00000300302 PRR26Q8N8Z3 221 aa9.14□□□□□ -0.95
HERPUD1-201ENST00000300302 NDUFB1O75438 58 aa9.13□□□□□ -0.95
HERPUD1-201ENST00000300302 Q5VSD8 79 aa9.13□□□□□ -0.95
HERPUD1-201ENST00000300302 ASB16-AS1Q495Z4 193 aa9.13□□□□□ -0.95
HERPUD1-201ENST00000300302 Q5XG85 94 aa9.12□□□□□ -0.95
HERPUD1-201ENST00000300302 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
HERPUD1-201ENST00000300302 LIMD2Q9BT23 127 aa9.12□□□□□ -0.95
HERPUD1-201ENST00000300302 SMIM20Q8N5G0 67 aa9.1□□□□□ -0.95
HERPUD1-201ENST00000300302 HCG22E2RYF7 251 aa9.09□□□□□ -0.95
HERPUD1-201ENST00000300302 SPINK1P00995 79 aa9.09□□□□□ -0.95
HERPUD1-201ENST00000300302 SPAG11AQ6PDA7 123 aa9.08□□□□□ -0.96
HERPUD1-201ENST00000300302 LINC00304Q8N9R0 145 aa9.08□□□□□ -0.96
HERPUD1-201ENST00000300302 BIRC6Q9NR09 4857 aa9.06□□□□□ -0.96
HERPUD1-201ENST00000300302 PKHD1L1Q86WI1 4243 aa9.05□□□□□ -0.96
HERPUD1-201ENST00000300302 TRAV7A0A075B6U4 112 aa9.05□□□□□ -0.96
HERPUD1-201ENST00000300302 Q8N1X5 172 aa9.05□□□□□ -0.96
HERPUD1-201ENST00000300302 RPS29P62273 56 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 440.5 ms