RNA–Protein interactions for RNA: ENST00000299954.13

PITPNC1-201, Transcript of phosphatidylinositol transfer protein cytoplasmic 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PITPNC1, Length 6,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNC1-201ENST00000299954 DNAH12Q6ZR08 3092 aa11□□□□□ -0.65
PITPNC1-201ENST00000299954 PRRC2CQ9Y520 2896 aaKnown RBP11□□□□□ -0.65
PITPNC1-201ENST00000299954 KRTAP1-5Q9BYS1 174 aa11□□□□□ -0.65
PITPNC1-201ENST00000299954 H1FX-AS1Q4G0G2 97 aa10.99□□□□□ -0.65
PITPNC1-201ENST00000299954 HECTD1Q9ULT8 2610 aa10.97□□□□□ -0.65
PITPNC1-201ENST00000299954 EPG5Q9HCE0 2579 aa10.96□□□□□ -0.66
PITPNC1-201ENST00000299954 Q5VSD8 79 aa10.95□□□□□ -0.66
PITPNC1-201ENST00000299954 FLNBO75369 2602 aaKnown RBP10.95□□□□□ -0.66
PITPNC1-201ENST00000299954 SPRR1BP22528 89 aa10.94□□□□□ -0.66
PITPNC1-201ENST00000299954 ADM2Q7Z4H4 148 aa10.93□□□□□ -0.66
PITPNC1-201ENST00000299954 KRTAP10-1P60331 282 aa10.9□□□□□ -0.66
PITPNC1-201ENST00000299954 KRTAP10-2P60368 255 aa10.89□□□□□ -0.67
PITPNC1-201ENST00000299954 SEC61BP60468 96 aaKnown RBP10.89□□□□□ -0.67
PITPNC1-201ENST00000299954 Q6ZR54 194 aa10.84□□□□□ -0.67
PITPNC1-201ENST00000299954 CEP350Q5VT06 3117 aa10.82□□□□□ -0.68
PITPNC1-201ENST00000299954 PANO1I0J062 215 aa10.8□□□□□ -0.68
PITPNC1-201ENST00000299954 PLAC4Q8WY50 150 aa10.78□□□□□ -0.68
PITPNC1-201ENST00000299954 C5orf42Q9H799 3197 aa10.76□□□□□ -0.69
PITPNC1-201ENST00000299954 FLNAP21333 2647 aaKnown RBP10.76□□□□□ -0.69
PITPNC1-201ENST00000299954 ATRQ13535 2644 aa10.75□□□□□ -0.69
PITPNC1-201ENST00000299954 A0A087X002 238 aa10.73□□□□□ -0.69
PITPNC1-201ENST00000299954 NOTCH2NLQ7Z3S9 236 aa10.73□□□□□ -0.69
PITPNC1-201ENST00000299954 A8MU10 97 aa10.7□□□□□ -0.7
PITPNC1-201ENST00000299954 ITPR3Q14573 2671 aa10.69□□□□□ -0.7
PITPNC1-201ENST00000299954 FLG2Q5D862 2391 aaPredicted RBP10.69□□□□□ -0.7
PITPNC1-201ENST00000299954 KRTAP29-1A8MX34 341 aaPredicted RBP10.66□□□□□ -0.7
PITPNC1-201ENST00000299954 KRTAP4-16G5E9R7 235 aaPredicted RBP10.62□□□□□ -0.71
PITPNC1-201ENST00000299954 LCE6AA0A183 80 aa10.6□□□□□ -0.71
PITPNC1-201ENST00000299954 KRTAP16-1A8MUX0 517 aa10.6□□□□□ -0.71
PITPNC1-201ENST00000299954 MAST4O15021 2626 aa10.6□□□□□ -0.71
PITPNC1-201ENST00000299954 C20orf166-AS1Q96NR2 134 aa10.59□□□□□ -0.71
PITPNC1-201ENST00000299954 KRTAP25-1Q3LHN0 102 aa10.55□□□□□ -0.72
PITPNC1-201ENST00000299954 KRTAP11-1Q8IUC1 163 aa10.54□□□□□ -0.72
PITPNC1-201ENST00000299954 CFAP54Q96N23 3096 aa10.51□□□□□ -0.73
PITPNC1-201ENST00000299954 A6NN06 94 aa10.49□□□□□ -0.73
PITPNC1-201ENST00000299954 ASB16-AS1Q495Z4 193 aa10.49□□□□□ -0.73
PITPNC1-201ENST00000299954 AKAP13Q12802 2813 aa10.49□□□□□ -0.73
PITPNC1-201ENST00000299954 A8MUU9 505 aa10.48□□□□□ -0.73
PITPNC1-201ENST00000299954 NDUFAF8A1L188 74 aa10.46□□□□□ -0.74
PITPNC1-201ENST00000299954 PCNTO95613 3336 aa10.45□□□□□ -0.74
PITPNC1-201ENST00000299954 CHD6Q8TD26 2715 aa10.45□□□□□ -0.74
PITPNC1-201ENST00000299954 NBEAL1Q6ZS30 2694 aa10.44□□□□□ -0.74
PITPNC1-201ENST00000299954 DMBT1Q9UGM3 2413 aaPredicted RBP10.42□□□□□ -0.74
PITPNC1-201ENST00000299954 HELZ2Q9BYK8 2649 aaKnown RBP10.39□□□□□ -0.75
PITPNC1-201ENST00000299954 STAB1Q9NY15 2570 aa10.38□□□□□ -0.75
PITPNC1-201ENST00000299954 CFAP46Q8IYW2 2715 aa10.38□□□□□ -0.75
PITPNC1-201ENST00000299954 A0A0C4DFX4 3053 aa10.36□□□□□ -0.75
PITPNC1-201ENST00000299954 CHD7Q9P2D1 2997 aa10.32□□□□□ -0.76
PITPNC1-201ENST00000299954 KRTAP7-1Q8IUC3 87 aa10.32□□□□□ -0.76
PITPNC1-201ENST00000299954 C10orf95Q9H7T3 257 aa10.3□□□□□ -0.76
PITPNC1-201ENST00000299954 TEX15Q9BXT5 2789 aa10.29□□□□□ -0.76
PITPNC1-201ENST00000299954 KRTAP13-2Q52LG2 175 aa10.28□□□□□ -0.76
PITPNC1-201ENST00000299954 GCN1Q92616 2671 aaKnown RBP10.23□□□□□ -0.77
PITPNC1-201ENST00000299954 CENPEQ02224 2701 aa10.23□□□□□ -0.77
PITPNC1-201ENST00000299954 Q6ZRN7 208 aaPredicted RBP10.19□□□□□ -0.78
PITPNC1-201ENST00000299954 MGAQ8IWI9 3026 aa10.18□□□□□ -0.78
PITPNC1-201ENST00000299954 UNC79Q9P2D8 2635 aa10.18□□□□□ -0.78
PITPNC1-201ENST00000299954 MKI67P46013 3256 aaKnown RBP10.17□□□□□ -0.78
PITPNC1-201ENST00000299954 TNP1P09430 55 aa10.15□□□□□ -0.78
PITPNC1-201ENST00000299954 STAB2Q8WWQ8 2551 aa10.15□□□□□ -0.79
PITPNC1-201ENST00000299954 RPS29P62273 56 aaKnown RBP10.14□□□□□ -0.79
PITPNC1-201ENST00000299954 SETXQ7Z333 2677 aaKnown RBP10.14□□□□□ -0.79
PITPNC1-201ENST00000299954 BRCA2P51587 3418 aa10.13□□□□□ -0.79
PITPNC1-201ENST00000299954 LAMA2P24043 3122 aaKnown RBP10.13□□□□□ -0.79
PITPNC1-201ENST00000299954 NBEAL2Q6ZNJ1 2754 aa10.13□□□□□ -0.79
PITPNC1-201ENST00000299954 FREM2Q5SZK8 3169 aa10.13□□□□□ -0.79
PITPNC1-201ENST00000299954 HTTP42858 3142 aa10.12□□□□□ -0.79
PITPNC1-201ENST00000299954 TEP1Q99973 2627 aaKnown RBP10.1□□□□□ -0.79
PITPNC1-201ENST00000299954 NOTCH1P46531 2555 aa10.09□□□□□ -0.79
PITPNC1-201ENST00000299954 TRIOO75962 3097 aa10.08□□□□□ -0.8
PITPNC1-201ENST00000299954 KRTAP13-1Q8IUC0 172 aa10.08□□□□□ -0.8
PITPNC1-201ENST00000299954 COL6A5A8TX70 2615 aa10.01□□□□□ -0.81
PITPNC1-201ENST00000299954 A0A1B0GVY2 172 aa10□□□□□ -0.81
PITPNC1-201ENST00000299954 WDFY4Q6ZS81 3184 aa9.97□□□□□ -0.81
PITPNC1-201ENST00000299954 CHD9Q3L8U1 2897 aa9.95□□□□□ -0.82
PITPNC1-201ENST00000299954 LAMA3Q16787 3333 aa9.95□□□□□ -0.82
PITPNC1-201ENST00000299954 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
PITPNC1-201ENST00000299954 XIRP2A4UGR9 3374 aa9.92□□□□□ -0.82
PITPNC1-201ENST00000299954 RANBP2P49792 3224 aaKnown RBP9.92□□□□□ -0.82
PITPNC1-201ENST00000299954 CELSR3Q9NYQ7 3312 aa9.91□□□□□ -0.82
PITPNC1-201ENST00000299954 FRYQ5TBA9 3013 aa9.91□□□□□ -0.82
PITPNC1-201ENST00000299954 BAHCC1Q9P281 2608 aa9.89□□□□□ -0.83
PITPNC1-201ENST00000299954 PRUNE2Q8WUY3 3088 aa9.8□□□□□ -0.84
PITPNC1-201ENST00000299954 MAP1AP78559 2803 aaPredicted RBP9.8□□□□□ -0.84
PITPNC1-201ENST00000299954 H0YAA0 97 aa9.77□□□□□ -0.85
PITPNC1-201ENST00000299954 UNC80Q8N2C7 3258 aa9.76□□□□□ -0.85
PITPNC1-201ENST00000299954 CDH23Q9H251 3354 aa9.73□□□□□ -0.85
PITPNC1-201ENST00000299954 KALRNO60229 2985 aa9.73□□□□□ -0.85
PITPNC1-201ENST00000299954 ZNF292O60281 2723 aa9.73□□□□□ -0.85
PITPNC1-201ENST00000299954 XP32Q5T750 250 aa9.73□□□□□ -0.85
PITPNC1-201ENST00000299954 VPS13AQ96RL7 3174 aa9.73□□□□□ -0.85
PITPNC1-201ENST00000299954 NSD1Q96L73 2696 aaPredicted RBP9.73□□□□□ -0.85
PITPNC1-201ENST00000299954 UBR5O95071 2799 aaPredicted RBP9.71□□□□□ -0.86
PITPNC1-201ENST00000299954 PP632Q6XCG6 107 aa9.7□□□□□ -0.86
PITPNC1-201ENST00000299954 P0C880 135 aa9.67□□□□□ -0.86
PITPNC1-201ENST00000299954 DSPP15924 2871 aaKnown RBP9.66□□□□□ -0.86
PITPNC1-201ENST00000299954 APCP25054 2843 aa9.64□□□□□ -0.87
PITPNC1-201ENST00000299954 ITPR2Q14571 2701 aa9.63□□□□□ -0.87
PITPNC1-201ENST00000299954 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
PITPNC1-201ENST00000299954 TRANK1O15050 2925 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms