RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 INAFM2P0DMQ5 153 aa3.9□□□□□ -1.79
DEPDC4-201ENST00000299185 Q6ZRX8 168 aa3.9□□□□□ -1.79
DEPDC4-201ENST00000299185 A0A1W2PPM0 123 aa3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 H0Y9J4 135 aa3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 ZNF861PO60384 105 aa3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 RPL28P46779 137 aaKnown RBP3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 ELOF1P60002 83 aaKnown RBP3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
DEPDC4-201ENST00000299185 A0A1B0GV90 55 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 COX6CP09669 75 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 KRTAP1-4P0C5Y4 121 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 SCGB1C2P0DMR2 95 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 FABP2P12104 132 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 PSMB2P49721 201 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 CBY1Q9Y3M2 126 aa3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 FLG2Q5D862 2391 aaPredicted RBP3.88□□□□□ -1.79
DEPDC4-201ENST00000299185 LYRM7Q5U5X0 104 aa3.87□□□□□ -1.79
DEPDC4-201ENST00000299185 GAGE2AQ6NT46 116 aa3.87□□□□□ -1.79
DEPDC4-201ENST00000299185 SPRR4Q96PI1 79 aa3.87□□□□□ -1.79
DEPDC4-201ENST00000299185 TRBV20-1A0A075B6N2 111 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 A0A087X002 238 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 TRBV7-6A0A0J9YX20 115 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 A0A1B0GV72 72 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 H0YGX0 51 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 VAMP3Q15836 100 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 SPINK6Q6UWN8 80 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 LINC00575Q6W349 94 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 C3orf22Q8N5N4 141 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 PRR26Q8N8Z3 221 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 DEFB105AQ8NG35 78 aa3.86□□□□□ -1.79
DEPDC4-201ENST00000299185 SRRM2Q9UQ35 2752 aaKnown RBP3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 A0A0G2JQZ4 141 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 LINC01547P58512 204 aaPredicted RBP3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 Q6ZQY7 126 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 GTF2H5Q6ZYL4 71 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 MTURNQ8N3F0 131 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 SPCS1Q9Y6A9 102 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 FAT3Q8TDW7 4589 aa3.85□□□□□ -1.79
DEPDC4-201ENST00000299185 K7EP34 96 aa3.84□□□□□ -1.79
DEPDC4-201ENST00000299185 TCL1BO95988 128 aa3.84□□□□□ -1.79
DEPDC4-201ENST00000299185 MT1HL1P0DM35 61 aa3.84□□□□□ -1.79
DEPDC4-201ENST00000299185 UBE2V1Q13404 147 aa3.84□□□□□ -1.79
DEPDC4-201ENST00000299185 MYCBP2O75592 4640 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 IGLV9-49A0A0B4J1Y8 123 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 LST1O00453 97 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 SNCGO76070 127 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 ATXN8Q156A1 80 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 DHRS4-AS1Q9P1J3 65 aa3.83□□□□□ -1.8
DEPDC4-201ENST00000299185 A0A1B0GX51 115 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 hADV29S1A0JD25 119 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 H3BMG7 143 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 TRACP01848 142 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 MOBPQ13875 183 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 Q8N377 158 aa3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
DEPDC4-201ENST00000299185 HMCN2Q8NDA2 5059 aa3.81□□□□□ -1.8
DEPDC4-201ENST00000299185 F8W1H4 67 aa3.81□□□□□ -1.8
DEPDC4-201ENST00000299185 LINC00483Q53H64 154 aa3.81□□□□□ -1.8
DEPDC4-201ENST00000299185 C9orf153Q5TBE3 101 aa3.81□□□□□ -1.8
DEPDC4-201ENST00000299185 SMIM29Q86T20 159 aa3.81□□□□□ -1.8
DEPDC4-201ENST00000299185 IGLV5-48A0A075B6I7 105 aa3.8□□□□□ -1.8
DEPDC4-201ENST00000299185 SLC25A20O43772 301 aa3.8□□□□□ -1.8
DEPDC4-201ENST00000299185 ZNF706Q9Y5V0 76 aaPredicted RBP3.8□□□□□ -1.8
DEPDC4-201ENST00000299185 SPRR1BP22528 89 aa3.79□□□□□ -1.8
DEPDC4-201ENST00000299185 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.79□□□□□ -1.8
DEPDC4-201ENST00000299185 Q8NBF4 154 aa3.79□□□□□ -1.8
DEPDC4-201ENST00000299185 LINC01600Q96MT4 127 aa3.79□□□□□ -1.8
DEPDC4-201ENST00000299185 PRO0461Q9UI25 63 aa3.79□□□□□ -1.8
DEPDC4-201ENST00000299185 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 TEX49A0A1B0GTD5 131 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 C9JAW5 83 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 DNAL4O96015 105 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 IGKV2-30P06310 120 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 BAALC-AS2P0C853 105 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 CRYGAP11844 174 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 HRCT1Q6UXD1 115 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 TYMSOSQ8TAI1 123 aa3.78□□□□□ -1.8
DEPDC4-201ENST00000299185 TNXBP22105 4242 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 H3BQ85 93 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 H3BT86 120 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 KRTAP10-8P60410 259 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 FAM229BQ4G0N7 80 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 OCIAD2Q56VL3 154 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 ANKRD29Q8N6D5 301 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 ORMDL1Q9P0S3 153 aa3.77□□□□□ -1.81
DEPDC4-201ENST00000299185 TMEM256-PLSCR3K7ERE1 68 aa3.76□□□□□ -1.81
DEPDC4-201ENST00000299185 LAMTOR3Q9UHA4 124 aa3.76□□□□□ -1.81
DEPDC4-201ENST00000299185 OXTP01178 125 aa3.75□□□□□ -1.81
DEPDC4-201ENST00000299185 NDUFV3P56181 108 aaKnown RBP3.75□□□□□ -1.81
DEPDC4-201ENST00000299185 LINC00304Q8N9R0 145 aa3.75□□□□□ -1.81
DEPDC4-201ENST00000299185 RETNLBQ9BQ08 111 aa3.75□□□□□ -1.81
DEPDC4-201ENST00000299185 F8WEM9 126 aa3.74□□□□□ -1.81
DEPDC4-201ENST00000299185 ETDBQ3ZM63 59 aa3.74□□□□□ -1.81
DEPDC4-201ENST00000299185 IGFL1Q6UW32 110 aa3.74□□□□□ -1.81
DEPDC4-201ENST00000299185 TEN1Q86WV5 123 aa3.74□□□□□ -1.81
DEPDC4-201ENST00000299185 PPDPFLQ8WWR9 84 aa3.74□□□□□ -1.81
DEPDC4-201ENST00000299185 OBSCN-AS1Q96MR7 158 aa3.72□□□□□ -1.81
DEPDC4-201ENST00000299185 C14orf132Q9NPU4 83 aa3.72□□□□□ -1.81
DEPDC4-201ENST00000299185 IGLV8-61A0A075B6I0 122 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms