RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 NOTCH2Q04721 2471 aa2.93□□□□□ -1.94
NCOA1-201ENST00000288599 FAM104AQ969W3 186 aa2.93□□□□□ -1.94
NCOA1-201ENST00000288599 USP9YO00507 2555 aaPredicted RBP2.92□□□□□ -1.94
NCOA1-201ENST00000288599 Q8N1X5 172 aa2.92□□□□□ -1.94
NCOA1-201ENST00000288599 ZFYVE26Q68DK2 2539 aa2.91□□□□□ -1.94
NCOA1-201ENST00000288599 CD164Q04900 197 aa2.91□□□□□ -1.94
NCOA1-201ENST00000288599 HIVEP3Q5T1R4 2406 aa2.91□□□□□ -1.94
NCOA1-201ENST00000288599 IGFL1Q6UW32 110 aa2.91□□□□□ -1.94
NCOA1-201ENST00000288599 DNAH10OSP0CZ25 163 aa2.91□□□□□ -1.94
NCOA1-201ENST00000288599 ELOF1P60002 83 aaKnown RBP2.9□□□□□ -1.94
NCOA1-201ENST00000288599 UBR5O95071 2799 aaPredicted RBP2.9□□□□□ -1.94
NCOA1-201ENST00000288599 FN1P02751 2386 aaKnown RBP2.9□□□□□ -1.94
NCOA1-201ENST00000288599 CASC10Q5T4H9 136 aa2.9□□□□□ -1.94
NCOA1-201ENST00000288599 URB1-AS1Q96HZ7 61 aa2.9□□□□□ -1.94
NCOA1-201ENST00000288599 PKD1L2Q7Z442 2459 aa2.9□□□□□ -1.94
NCOA1-201ENST00000288599 Q6ZRX8 168 aa2.9□□□□□ -1.95
NCOA1-201ENST00000288599 VWFP04275 2813 aa2.9□□□□□ -1.95
NCOA1-201ENST00000288599 ZNF469Q96JG9 3925 aaPredicted RBP2.89□□□□□ -1.95
NCOA1-201ENST00000288599 KLLNB2CW77 178 aa2.89□□□□□ -1.95
NCOA1-201ENST00000288599 K7EIL1 84 aa2.89□□□□□ -1.95
NCOA1-201ENST00000288599 A0A1B0GVX0 72 aa2.89□□□□□ -1.95
NCOA1-201ENST00000288599 M0QZ58 72 aa2.89□□□□□ -1.95
NCOA1-201ENST00000288599 LRRK2Q5S007 2527 aa2.89□□□□□ -1.95
NCOA1-201ENST00000288599 CDSNQ15517 529 aa2.89□□□□□ -1.95
NCOA1-201ENST00000288599 PTPN13Q12923 2485 aa2.89□□□□□ -1.95
NCOA1-201ENST00000288599 SETXQ7Z333 2677 aaKnown RBP2.88□□□□□ -1.95
NCOA1-201ENST00000288599 A0A0G2JQZ4 141 aa2.88□□□□□ -1.95
NCOA1-201ENST00000288599 SPG11Q96JI7 2443 aa2.88□□□□□ -1.95
NCOA1-201ENST00000288599 TRBV7-4A0A0J9YYF1 115 aa2.88□□□□□ -1.95
NCOA1-201ENST00000288599 ROMO1P60602 79 aa2.88□□□□□ -1.95
NCOA1-201ENST00000288599 MYO9AB2RTY4 2548 aa2.87□□□□□ -1.95
NCOA1-201ENST00000288599 MYO18BQ8IUG5 2567 aa2.87□□□□□ -1.95
NCOA1-201ENST00000288599 RAI1Q7Z5J4 1906 aaPredicted RBP2.87□□□□□ -1.95
NCOA1-201ENST00000288599 SMCPP49901 116 aaPredicted RBP2.87□□□□□ -1.95
NCOA1-201ENST00000288599 Q8NAQ8 132 aa2.87□□□□□ -1.95
NCOA1-201ENST00000288599 C20orf166-AS1Q96NR2 134 aa2.87□□□□□ -1.95
NCOA1-201ENST00000288599 ITPR3Q14573 2671 aa2.87□□□□□ -1.95
NCOA1-201ENST00000288599 NBPF19A0A087WUL8 3843 aa2.87□□□□□ -1.95
NCOA1-201ENST00000288599 AKAP9Q99996 3911 aa2.87□□□□□ -1.95
NCOA1-201ENST00000288599 APCP25054 2843 aa2.87□□□□□ -1.95
NCOA1-201ENST00000288599 EPG5Q9HCE0 2579 aa2.87□□□□□ -1.95
NCOA1-201ENST00000288599 DMAC1Q96GE9 116 aa2.86□□□□□ -1.95
NCOA1-201ENST00000288599 FAM168BA1KXE4 195 aa2.86□□□□□ -1.95
NCOA1-201ENST00000288599 TENM4Q6N022 2769 aa2.86□□□□□ -1.95
NCOA1-201ENST00000288599 POLQO75417 2590 aa2.86□□□□□ -1.95
NCOA1-201ENST00000288599 TEX15Q9BXT5 2789 aa2.86□□□□□ -1.95
NCOA1-201ENST00000288599 GVQW2A0A096LPI5 108 aaPredicted RBP2.86□□□□□ -1.95
NCOA1-201ENST00000288599 PRAC1Q96KF2 57 aa2.86□□□□□ -1.95
NCOA1-201ENST00000288599 A0A1B0GU33 70 aa2.85□□□□□ -1.95
NCOA1-201ENST00000288599 ZCCHC13Q8WW36 166 aaKnown RBP2.85□□□□□ -1.95
NCOA1-201ENST00000288599 CYP4F30PQ9H0H9 118 aa2.85□□□□□ -1.95
NCOA1-201ENST00000288599 USP24Q9UPU5 2620 aa2.85□□□□□ -1.95
NCOA1-201ENST00000288599 FAM229BQ4G0N7 80 aa2.85□□□□□ -1.95
NCOA1-201ENST00000288599 LINC00612Q8N6U2 182 aa2.85□□□□□ -1.95
NCOA1-201ENST00000288599 C2CD3Q4AC94 2353 aa2.84□□□□□ -1.95
NCOA1-201ENST00000288599 ITPR2Q14571 2701 aa2.84□□□□□ -1.95
NCOA1-201ENST00000288599 LCE6AA0A183 80 aa2.84□□□□□ -1.95
NCOA1-201ENST00000288599 ANAPC11Q9NYG5 84 aa2.84□□□□□ -1.95
NCOA1-201ENST00000288599 CHD6Q8TD26 2715 aa2.84□□□□□ -1.96
NCOA1-201ENST00000288599 A0A096LNJ9 63 aa2.84□□□□□ -1.96
NCOA1-201ENST00000288599 OTOGQ6ZRI0 2925 aa2.84□□□□□ -1.96
NCOA1-201ENST00000288599 Q5W150 140 aa2.83□□□□□ -1.96
NCOA1-201ENST00000288599 ABCA12Q86UK0 2595 aa2.83□□□□□ -1.96
NCOA1-201ENST00000288599 SPATA8Q6RVD6 105 aa2.83□□□□□ -1.96
NCOA1-201ENST00000288599 TENM1Q9UKZ4 2725 aa2.83□□□□□ -1.96
NCOA1-201ENST00000288599 TNP2Q05952 138 aa2.82□□□□□ -1.96
NCOA1-201ENST00000288599 UNC79Q9P2D8 2635 aa2.81□□□□□ -1.96
NCOA1-201ENST00000288599 PDZD2O15018 2839 aa2.81□□□□□ -1.96
NCOA1-201ENST00000288599 KLK9Q2XQG4 91 aa2.81□□□□□ -1.96
NCOA1-201ENST00000288599 FP248Q71RG6 208 aaPredicted RBP2.81□□□□□ -1.96
NCOA1-201ENST00000288599 CNFNQ9BYD5 112 aa2.81□□□□□ -1.96
NCOA1-201ENST00000288599 TLN2Q9Y4G6 2542 aa2.8□□□□□ -1.96
NCOA1-201ENST00000288599 HELZ2Q9BYK8 2649 aaKnown RBP2.8□□□□□ -1.96
NCOA1-201ENST00000288599 ACACBO00763 2458 aa2.8□□□□□ -1.96
NCOA1-201ENST00000288599 JMJD1CQ15652 2540 aa2.8□□□□□ -1.96
NCOA1-201ENST00000288599 LOC110117498A0A087WWA1 95 aa2.8□□□□□ -1.96
NCOA1-201ENST00000288599 SETD2Q9BYW2 2564 aaPredicted RBP2.79□□□□□ -1.96
NCOA1-201ENST00000288599 C15orf56Q8N910 161 aa2.79□□□□□ -1.96
NCOA1-201ENST00000288599 SPRR4Q96PI1 79 aa2.79□□□□□ -1.96
NCOA1-201ENST00000288599 COX8CQ7Z4L0 72 aa2.79□□□□□ -1.96
NCOA1-201ENST00000288599 Q8N9P0 234 aaPredicted RBP2.79□□□□□ -1.96
NCOA1-201ENST00000288599 NAV2Q8IVL1 2488 aa2.77□□□□□ -1.97
NCOA1-201ENST00000288599 KRTAP10-11P60412 298 aa2.77□□□□□ -1.97
NCOA1-201ENST00000288599 KLKP1Q107X0 134 aa2.77□□□□□ -1.97
NCOA1-201ENST00000288599 PLAC8Q9NZF1 115 aa2.77□□□□□ -1.97
NCOA1-201ENST00000288599 SPRR1BP22528 89 aa2.77□□□□□ -1.97
NCOA1-201ENST00000288599 ZNF462Q96JM2 2506 aa2.77□□□□□ -1.97
NCOA1-201ENST00000288599 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
NCOA1-201ENST00000288599 A0A1W2PPR1 153 aa2.76□□□□□ -1.97
NCOA1-201ENST00000288599 NBEAL2Q6ZNJ1 2754 aa2.76□□□□□ -1.97
NCOA1-201ENST00000288599 PKD1L1Q8TDX9 2849 aa2.76□□□□□ -1.97
NCOA1-201ENST00000288599 PRR34Q9NV39 138 aa2.76□□□□□ -1.97
NCOA1-201ENST00000288599 FLG2Q5D862 2391 aaPredicted RBP2.76□□□□□ -1.97
NCOA1-201ENST00000288599 ADM2Q7Z4H4 148 aa2.75□□□□□ -1.97
NCOA1-201ENST00000288599 GCN1Q92616 2671 aaKnown RBP2.75□□□□□ -1.97
NCOA1-201ENST00000288599 TEP1Q99973 2627 aaKnown RBP2.75□□□□□ -1.97
NCOA1-201ENST00000288599 MTORP42345 2549 aa2.74□□□□□ -1.97
NCOA1-201ENST00000288599 HIVEP1P15822 2718 aa2.74□□□□□ -1.97
NCOA1-201ENST00000288599 FLNAP21333 2647 aaKnown RBP2.74□□□□□ -1.97
NCOA1-201ENST00000288599 ANK3Q12955 4377 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms