RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.6□□□□□ -1.51
SMC2-201ENST00000286398 KRTAP10-3P60369 221 aa5.6□□□□□ -1.51
SMC2-201ENST00000286398 Q8NDZ9 215 aa5.6□□□□□ -1.51
SMC2-201ENST00000286398 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
SMC2-201ENST00000286398 PCSK5Q92824 1860 aa5.59□□□□□ -1.51
SMC2-201ENST00000286398 SPRR1AP35321 89 aa5.58□□□□□ -1.52
SMC2-201ENST00000286398 GOLGB1Q14789 3259 aaKnown RBP5.58□□□□□ -1.52
SMC2-201ENST00000286398 R4GN34 69 aa5.58□□□□□ -1.52
SMC2-201ENST00000286398 FLNAP21333 2647 aaKnown RBP5.57□□□□□ -1.52
SMC2-201ENST00000286398 CHD6Q8TD26 2715 aa5.56□□□□□ -1.52
SMC2-201ENST00000286398 PCNTO95613 3336 aa5.56□□□□□ -1.52
SMC2-201ENST00000286398 CENPEQ02224 2701 aa5.55□□□□□ -1.52
SMC2-201ENST00000286398 SPATA8Q6RVD6 105 aa5.55□□□□□ -1.52
SMC2-201ENST00000286398 KRTAP25-1Q3LHN0 102 aa5.55□□□□□ -1.52
SMC2-201ENST00000286398 A6NN06 94 aa5.54□□□□□ -1.52
SMC2-201ENST00000286398 SPRR1BP22528 89 aa5.54□□□□□ -1.52
SMC2-201ENST00000286398 M0R2T5 61 aa5.53□□□□□ -1.52
SMC2-201ENST00000286398 TNP2Q05952 138 aa5.53□□□□□ -1.52
SMC2-201ENST00000286398 USP34Q70CQ2 3546 aa5.53□□□□□ -1.52
SMC2-201ENST00000286398 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
SMC2-201ENST00000286398 ADM2Q7Z4H4 148 aa5.51□□□□□ -1.53
SMC2-201ENST00000286398 BAHCC1Q9P281 2608 aa5.51□□□□□ -1.53
SMC2-201ENST00000286398 UNC79Q9P2D8 2635 aa5.5□□□□□ -1.53
SMC2-201ENST00000286398 C20orf166-AS1Q96NR2 134 aa5.49□□□□□ -1.53
SMC2-201ENST00000286398 M0QZ58 72 aa5.49□□□□□ -1.53
SMC2-201ENST00000286398 CFAP46Q8IYW2 2715 aa5.48□□□□□ -1.53
SMC2-201ENST00000286398 KRTAP26-1Q6PEX3 210 aa5.48□□□□□ -1.53
SMC2-201ENST00000286398 COL6A5A8TX70 2615 aa5.47□□□□□ -1.53
SMC2-201ENST00000286398 PLAC8Q9NZF1 115 aa5.46□□□□□ -1.53
SMC2-201ENST00000286398 CEP350Q5VT06 3117 aa5.46□□□□□ -1.54
SMC2-201ENST00000286398 Q6ZR54 194 aa5.45□□□□□ -1.54
SMC2-201ENST00000286398 TEP1Q99973 2627 aaKnown RBP5.45□□□□□ -1.54
SMC2-201ENST00000286398 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
SMC2-201ENST00000286398 HELZ2Q9BYK8 2649 aaKnown RBP5.43□□□□□ -1.54
SMC2-201ENST00000286398 SEC61BP60468 96 aaKnown RBP5.42□□□□□ -1.54
SMC2-201ENST00000286398 GCN1Q92616 2671 aaKnown RBP5.41□□□□□ -1.54
SMC2-201ENST00000286398 TEX15Q9BXT5 2789 aa5.4□□□□□ -1.54
SMC2-201ENST00000286398 A8MU10 97 aa5.4□□□□□ -1.55
SMC2-201ENST00000286398 SETXQ7Z333 2677 aaKnown RBP5.39□□□□□ -1.55
SMC2-201ENST00000286398 UTRNP46939 3433 aa5.38□□□□□ -1.55
SMC2-201ENST00000286398 KRTAP1-3Q8IUG1 177 aa5.38□□□□□ -1.55
SMC2-201ENST00000286398 KRTAP1-1Q07627 177 aa5.37□□□□□ -1.55
SMC2-201ENST00000286398 PANO1I0J062 215 aa5.35□□□□□ -1.55
SMC2-201ENST00000286398 KRTAP4-16G5E9R7 235 aaPredicted RBP5.33□□□□□ -1.56
SMC2-201ENST00000286398 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
SMC2-201ENST00000286398 KRTAP1-5Q9BYS1 174 aa5.31□□□□□ -1.56
SMC2-201ENST00000286398 A8MUU9 505 aa5.31□□□□□ -1.56
SMC2-201ENST00000286398 A0A087X002 238 aa5.29□□□□□ -1.56
SMC2-201ENST00000286398 NOTCH2NLQ7Z3S9 236 aa5.29□□□□□ -1.56
SMC2-201ENST00000286398 EP400Q96L91 3159 aa5.29□□□□□ -1.56
SMC2-201ENST00000286398 NBEAL2Q6ZNJ1 2754 aa5.29□□□□□ -1.56
SMC2-201ENST00000286398 NSD1Q96L73 2696 aaPredicted RBP5.29□□□□□ -1.56
SMC2-201ENST00000286398 LCE6AA0A183 80 aa5.28□□□□□ -1.56
SMC2-201ENST00000286398 CFAP54Q96N23 3096 aa5.25□□□□□ -1.57
SMC2-201ENST00000286398 IGSF10Q6WRI0 2623 aa5.25□□□□□ -1.57
SMC2-201ENST00000286398 C5orf42Q9H799 3197 aa5.24□□□□□ -1.57
SMC2-201ENST00000286398 A0A0C4DFX4 3053 aa5.23□□□□□ -1.57
SMC2-201ENST00000286398 MAP1AP78559 2803 aaPredicted RBP5.22□□□□□ -1.57
SMC2-201ENST00000286398 KRTAP10-1P60331 282 aa5.22□□□□□ -1.57
SMC2-201ENST00000286398 KRTAP11-1Q8IUC1 163 aa5.22□□□□□ -1.57
SMC2-201ENST00000286398 UBR5O95071 2799 aaPredicted RBP5.19□□□□□ -1.58
SMC2-201ENST00000286398 ZNF292O60281 2723 aa5.19□□□□□ -1.58
SMC2-201ENST00000286398 KRTAP10-2P60368 255 aa5.18□□□□□ -1.58
SMC2-201ENST00000286398 Q5VSD8 79 aa5.17□□□□□ -1.58
SMC2-201ENST00000286398 KMT2BQ9UMN6 2715 aaPredicted RBP5.17□□□□□ -1.58
SMC2-201ENST00000286398 LAMA2P24043 3122 aaKnown RBP5.15□□□□□ -1.59
SMC2-201ENST00000286398 DNAH12Q6ZR08 3092 aa5.14□□□□□ -1.59
SMC2-201ENST00000286398 LAMA3Q16787 3333 aa5.14□□□□□ -1.59
SMC2-201ENST00000286398 XIRP2A4UGR9 3374 aa5.12□□□□□ -1.59
SMC2-201ENST00000286398 ITPR1Q14643 2758 aa5.12□□□□□ -1.59
SMC2-201ENST00000286398 VCANP13611 3396 aa5.12□□□□□ -1.59
SMC2-201ENST00000286398 TNP1P09430 55 aa5.11□□□□□ -1.59
SMC2-201ENST00000286398 FREM2Q5SZK8 3169 aa5.08□□□□□ -1.6
SMC2-201ENST00000286398 MGAQ8IWI9 3026 aa5.07□□□□□ -1.6
SMC2-201ENST00000286398 UTP20O75691 2785 aaKnown RBP5.07□□□□□ -1.6
SMC2-201ENST00000286398 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
SMC2-201ENST00000286398 CDH23Q9H251 3354 aa5.06□□□□□ -1.6
SMC2-201ENST00000286398 KRTAP7-1Q8IUC3 87 aa5.06□□□□□ -1.6
SMC2-201ENST00000286398 FRYQ5TBA9 3013 aa5.03□□□□□ -1.6
SMC2-201ENST00000286398 P0C880 135 aa5.03□□□□□ -1.6
SMC2-201ENST00000286398 KRTAP13-2Q52LG2 175 aa5.02□□□□□ -1.61
SMC2-201ENST00000286398 PP632Q6XCG6 107 aa5.02□□□□□ -1.61
SMC2-201ENST00000286398 TRANK1O15050 2925 aa5.01□□□□□ -1.61
SMC2-201ENST00000286398 ASH1LQ9NR48 2969 aaKnown RBP5.01□□□□□ -1.61
SMC2-201ENST00000286398 APCP25054 2843 aa5.01□□□□□ -1.61
SMC2-201ENST00000286398 PRUNE2Q8WUY3 3088 aa5.01□□□□□ -1.61
SMC2-201ENST00000286398 BRCA2P51587 3418 aa5□□□□□ -1.61
SMC2-201ENST00000286398 KRTAP13-1Q8IUC0 172 aa5□□□□□ -1.61
SMC2-201ENST00000286398 KRTAP10-8P60410 259 aa4.99□□□□□ -1.61
SMC2-201ENST00000286398 DNAH14Q0VDD8 3507 aa4.98□□□□□ -1.61
SMC2-201ENST00000286398 ITPR2Q14571 2701 aa4.97□□□□□ -1.61
SMC2-201ENST00000286398 Q6ZRN7 208 aaPredicted RBP4.96□□□□□ -1.61
SMC2-201ENST00000286398 DMXL2Q8TDJ6 3036 aa4.96□□□□□ -1.62
SMC2-201ENST00000286398 CHD7Q9P2D1 2997 aa4.95□□□□□ -1.62
SMC2-201ENST00000286398 RANBP2P49792 3224 aaKnown RBP4.95□□□□□ -1.62
SMC2-201ENST00000286398 TRIOO75962 3097 aa4.95□□□□□ -1.62
SMC2-201ENST00000286398 SZT2Q5T011 3432 aa4.94□□□□□ -1.62
SMC2-201ENST00000286398 H0YAA0 97 aa4.94□□□□□ -1.62
SMC2-201ENST00000286398 LRBAP50851 2863 aa4.93□□□□□ -1.62
SMC2-201ENST00000286398 CHD9Q3L8U1 2897 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms