RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 Q1T7F1 81 aa11.78□□□□□ -0.52
CNIH3-201ENST00000272133 PRB2P02812 416 aaPredicted RBP11.77□□□□□ -0.52
CNIH3-201ENST00000272133 RPL37AP61513 92 aaKnown RBP11.77□□□□□ -0.53
CNIH3-201ENST00000272133 COL6A5A8TX70 2615 aa11.77□□□□□ -0.53
CNIH3-201ENST00000272133 C1orf195Q5TG92 126 aa11.76□□□□□ -0.53
CNIH3-201ENST00000272133 CYP4F30PQ9H0H9 118 aa11.75□□□□□ -0.53
CNIH3-201ENST00000272133 SRRM2Q9UQ35 2752 aaKnown RBP11.75□□□□□ -0.53
CNIH3-201ENST00000272133 DNAH10Q8IVF4 4471 aa11.75□□□□□ -0.53
CNIH3-201ENST00000272133 PSPHP1O15172 72 aa11.74□□□□□ -0.53
CNIH3-201ENST00000272133 IGKV2-24A0A0C4DH68 120 aa11.74□□□□□ -0.53
CNIH3-201ENST00000272133 A0A096LNI7 61 aa11.73□□□□□ -0.53
CNIH3-201ENST00000272133 LYSTQ99698 3801 aa11.72□□□□□ -0.53
CNIH3-201ENST00000272133 TRAV22A0A0B4J277 110 aa11.71□□□□□ -0.53
CNIH3-201ENST00000272133 MP68P56378 58 aa11.71□□□□□ -0.53
CNIH3-201ENST00000272133 LINC00208Q96KT6 92 aa11.71□□□□□ -0.53
CNIH3-201ENST00000272133 NDUFB1O75438 58 aa11.71□□□□□ -0.54
CNIH3-201ENST00000272133 IGLV8-61A0A075B6I0 122 aa11.7□□□□□ -0.54
CNIH3-201ENST00000272133 KRTAP29-1A8MX34 341 aaPredicted RBP11.68□□□□□ -0.54
CNIH3-201ENST00000272133 UBE2AP49459 152 aa11.67□□□□□ -0.54
CNIH3-201ENST00000272133 NBEAL1Q6ZS30 2694 aa11.66□□□□□ -0.54
CNIH3-201ENST00000272133 CSMD3Q7Z407 3707 aa11.65□□□□□ -0.54
CNIH3-201ENST00000272133 C16orf90A8MZG2 172 aa11.65□□□□□ -0.54
CNIH3-201ENST00000272133 PRR15Q8IV56 129 aa11.65□□□□□ -0.55
CNIH3-201ENST00000272133 CASC2Q6XLA1 102 aa11.64□□□□□ -0.55
CNIH3-201ENST00000272133 KRTAP11-1Q8IUC1 163 aa11.64□□□□□ -0.55
CNIH3-201ENST00000272133 B9D2Q9BPU9 175 aa11.64□□□□□ -0.55
CNIH3-201ENST00000272133 H0Y9P7 68 aa11.63□□□□□ -0.55
CNIH3-201ENST00000272133 CNBPP62633 177 aaKnown RBP11.63□□□□□ -0.55
CNIH3-201ENST00000272133 A8MUN3 132 aa11.62□□□□□ -0.55
CNIH3-201ENST00000272133 KRTAP1-5Q9BYS1 174 aa11.62□□□□□ -0.55
CNIH3-201ENST00000272133 HUWE1Q7Z6Z7 4374 aaKnown RBP11.6□□□□□ -0.55
CNIH3-201ENST00000272133 V9GYY9 64 aa11.6□□□□□ -0.55
CNIH3-201ENST00000272133 PHF5AQ7RTV0 110 aaKnown RBP11.59□□□□□ -0.55
CNIH3-201ENST00000272133 DNAH9Q9NYC9 4486 aa11.59□□□□□ -0.55
CNIH3-201ENST00000272133 CHTF8P0CG12 524 aa11.59□□□□□ -0.55
CNIH3-201ENST00000272133 A8MWP4 228 aa11.57□□□□□ -0.56
CNIH3-201ENST00000272133 LINC00472Q9H8W2 130 aa11.57□□□□□ -0.56
CNIH3-201ENST00000272133 SPANXA2-OT1Q8N9U9 137 aa11.55□□□□□ -0.56
CNIH3-201ENST00000272133 K7EIL1 84 aa11.54□□□□□ -0.56
CNIH3-201ENST00000272133 A8MU10 97 aa11.53□□□□□ -0.56
CNIH3-201ENST00000272133 Q5VV11 94 aa11.53□□□□□ -0.56
CNIH3-201ENST00000272133 H3BPC8 53 aa11.53□□□□□ -0.56
CNIH3-201ENST00000272133 SPRR1BP22528 89 aa11.52□□□□□ -0.56
CNIH3-201ENST00000272133 H0Y9J4 135 aa11.51□□□□□ -0.57
CNIH3-201ENST00000272133 MGAM2Q2M2H8 2515 aa11.51□□□□□ -0.57
CNIH3-201ENST00000272133 C9orf163Q8N9P6 203 aa11.5□□□□□ -0.57
CNIH3-201ENST00000272133 Q8N9P0 234 aaPredicted RBP11.49□□□□□ -0.57
CNIH3-201ENST00000272133 MMP24-AS1A0A0U1RRL7 71 aa11.48□□□□□ -0.57
CNIH3-201ENST00000272133 STAB2Q8WWQ8 2551 aa11.47□□□□□ -0.57
CNIH3-201ENST00000272133 COL7A1Q02388 2944 aa11.47□□□□□ -0.57
CNIH3-201ENST00000272133 PMAIP1Q13794 54 aa11.46□□□□□ -0.57
CNIH3-201ENST00000272133 MDFIQ99750 246 aa11.45□□□□□ -0.58
CNIH3-201ENST00000272133 TENM2Q9NT68 2774 aa11.45□□□□□ -0.58
CNIH3-201ENST00000272133 CHKB-CPT1BH3BT56 60 aa11.43□□□□□ -0.58
CNIH3-201ENST00000272133 PRR15LQ9BU68 103 aa11.43□□□□□ -0.58
CNIH3-201ENST00000272133 SEC61GP60059 68 aa11.42□□□□□ -0.58
CNIH3-201ENST00000272133 LIMD2Q9BT23 127 aa11.42□□□□□ -0.58
CNIH3-201ENST00000272133 DNAH7Q8WXX0 4024 aa11.4□□□□□ -0.58
CNIH3-201ENST00000272133 COA5Q86WW8 74 aa11.4□□□□□ -0.58
CNIH3-201ENST00000272133 PCOTHQ58A44 107 aa11.39□□□□□ -0.59
CNIH3-201ENST00000272133 PANO1I0J062 215 aa11.39□□□□□ -0.59
CNIH3-201ENST00000272133 UBE2DNLQ8IWF7 75 aa11.39□□□□□ -0.59
CNIH3-201ENST00000272133 IGLV7-46A0A075B6I9 117 aa11.38□□□□□ -0.59
CNIH3-201ENST00000272133 Q96NJ1 140 aa11.37□□□□□ -0.59
CNIH3-201ENST00000272133 IGLV9-49A0A0B4J1Y8 123 aa11.37□□□□□ -0.59
CNIH3-201ENST00000272133 C14orf177Q52M58 125 aa11.37□□□□□ -0.59
CNIH3-201ENST00000272133 KRTAP13-1Q8IUC0 172 aa11.35□□□□□ -0.59
CNIH3-201ENST00000272133 CD164Q04900 197 aa11.34□□□□□ -0.59
CNIH3-201ENST00000272133 ASB16-AS1Q495Z4 193 aa11.32□□□□□ -0.6
CNIH3-201ENST00000272133 MOBPQ13875 183 aa11.29□□□□□ -0.6
CNIH3-201ENST00000272133 C8orf17Q9NRJ1 99 aa11.29□□□□□ -0.6
CNIH3-201ENST00000272133 Q75L30 129 aa11.29□□□□□ -0.6
CNIH3-201ENST00000272133 APLNQ9ULZ1 77 aa11.29□□□□□ -0.6
CNIH3-201ENST00000272133 LCA10Q71F78 164 aa11.28□□□□□ -0.6
CNIH3-201ENST00000272133 TP53AIP1Q9HCN2 124 aa11.28□□□□□ -0.6
CNIH3-201ENST00000272133 LOC101927531A0A1B0GV80 90 aa11.28□□□□□ -0.6
CNIH3-201ENST00000272133 NDUFS5O43920 106 aa11.27□□□□□ -0.6
CNIH3-201ENST00000272133 IGHV6-1A0A0B4J1U7 121 aa11.27□□□□□ -0.61
CNIH3-201ENST00000272133 A6NED7 52 aa11.27□□□□□ -0.61
CNIH3-201ENST00000272133 SPTSSBQ8NFR3 76 aa11.26□□□□□ -0.61
CNIH3-201ENST00000272133 Q6ZR54 194 aa11.26□□□□□ -0.61
CNIH3-201ENST00000272133 DYNC2H1Q8NCM8 4307 aaKnown RBP11.25□□□□□ -0.61
CNIH3-201ENST00000272133 SPAG11AQ6PDA7 123 aa11.24□□□□□ -0.61
CNIH3-201ENST00000272133 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.24□□□□□ -0.61
CNIH3-201ENST00000272133 PLECQ15149 4684 aaKnown RBP11.22□□□□□ -0.61
CNIH3-201ENST00000272133 A0A1B0GVX0 72 aa11.22□□□□□ -0.61
CNIH3-201ENST00000272133 FRAS1Q86XX4 4008 aa11.22□□□□□ -0.61
CNIH3-201ENST00000272133 A0A087X002 238 aa11.2□□□□□ -0.62
CNIH3-201ENST00000272133 NOTCH2NLQ7Z3S9 236 aa11.2□□□□□ -0.62
CNIH3-201ENST00000272133 LINC00483Q53H64 154 aa11.19□□□□□ -0.62
CNIH3-201ENST00000272133 SPACA4Q8TDM5 124 aa11.19□□□□□ -0.62
CNIH3-201ENST00000272133 ANAPC11Q9NYG5 84 aa11.19□□□□□ -0.62
CNIH3-201ENST00000272133 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
CNIH3-201ENST00000272133 HRES1P13985 223 aa11.18□□□□□ -0.62
CNIH3-201ENST00000272133 Q6ZRN7 208 aaPredicted RBP11.18□□□□□ -0.62
CNIH3-201ENST00000272133 MRPL34Q9BQ48 92 aaKnown RBP11.17□□□□□ -0.62
CNIH3-201ENST00000272133 PRKDCP78527 4128 aaKnown RBP11.17□□□□□ -0.62
CNIH3-201ENST00000272133 ATP11AUNQ6ZP68 121 aa11.17□□□□□ -0.62
CNIH3-201ENST00000272133 WWC2-AS2Q96NR7 200 aa11.17□□□□□ -0.62
CNIH3-201ENST00000272133 LINC01558Q9Y6Z2 57 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms