RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 ST20-AS1Q8NBB2 130 aa9.48□□□□□ -0.89
COPS3-201ENST00000268717 DEFB105AQ8NG35 78 aa9.48□□□□□ -0.89
COPS3-201ENST00000268717 KRTAP17-1Q9BYP8 105 aa9.48□□□□□ -0.89
COPS3-201ENST00000268717 ABCA13Q86UQ4 5058 aa9.48□□□□□ -0.89
COPS3-201ENST00000268717 XGP55808 180 aa9.47□□□□□ -0.89
COPS3-201ENST00000268717 HIGD2AQ9BW72 106 aa9.47□□□□□ -0.89
COPS3-201ENST00000268717 SPRR1BP22528 89 aa9.45□□□□□ -0.9
COPS3-201ENST00000268717 LINC00643Q86TS7 51 aa9.44□□□□□ -0.9
COPS3-201ENST00000268717 KRTAP4-5Q9BYR2 181 aa9.44□□□□□ -0.9
COPS3-201ENST00000268717 PSORS1C2Q9UIG4 136 aa9.44□□□□□ -0.9
COPS3-201ENST00000268717 FAM30AQ9NZY2 134 aa9.43□□□□□ -0.9
COPS3-201ENST00000268717 SMIM29Q86T20 159 aa9.42□□□□□ -0.9
COPS3-201ENST00000268717 Q8N1X5 172 aa9.42□□□□□ -0.9
COPS3-201ENST00000268717 FAT1Q14517 4588 aa9.42□□□□□ -0.9
COPS3-201ENST00000268717 MT-ATP8P03928 68 aa9.42□□□□□ -0.9
COPS3-201ENST00000268717 CIRBP-AS1Q8TBR5 109 aa9.42□□□□□ -0.9
COPS3-201ENST00000268717 LINC00846Q9NV44 126 aa9.42□□□□□ -0.9
COPS3-201ENST00000268717 A0A1B0GW54 56 aa9.41□□□□□ -0.9
COPS3-201ENST00000268717 IGLV8-61A0A075B6I0 122 aa9.4□□□□□ -0.9
COPS3-201ENST00000268717 F8WEM9 126 aa9.4□□□□□ -0.9
COPS3-201ENST00000268717 C3orf22Q8N5N4 141 aa9.39□□□□□ -0.91
COPS3-201ENST00000268717 ZNF861PO60384 105 aa9.38□□□□□ -0.91
COPS3-201ENST00000268717 SCGB1A1P11684 91 aa9.38□□□□□ -0.91
COPS3-201ENST00000268717 C1orf137Q5JT78 98 aa9.38□□□□□ -0.91
COPS3-201ENST00000268717 SCXQ7RTU7 201 aa9.38□□□□□ -0.91
COPS3-201ENST00000268717 VPS13BQ7Z7G8 4022 aa9.38□□□□□ -0.91
COPS3-201ENST00000268717 ZNF706Q9Y5V0 76 aaPredicted RBP9.38□□□□□ -0.91
COPS3-201ENST00000268717 UBL5Q9BZL1 73 aa9.37□□□□□ -0.91
COPS3-201ENST00000268717 TRBV7-7A0A0K0K1E9 115 aa9.36□□□□□ -0.91
COPS3-201ENST00000268717 HAMPP81172 84 aa9.36□□□□□ -0.91
COPS3-201ENST00000268717 Q6Q795 121 aa9.36□□□□□ -0.91
COPS3-201ENST00000268717 IMUPQ9GZP8 106 aa9.36□□□□□ -0.91
COPS3-201ENST00000268717 ATP5EP2Q5VTU8 51 aa9.35□□□□□ -0.91
COPS3-201ENST00000268717 Q6JHZ5 121 aa9.35□□□□□ -0.91
COPS3-201ENST00000268717 LINC00483Q53H64 154 aa9.34□□□□□ -0.91
COPS3-201ENST00000268717 SPRR4Q96PI1 79 aa9.34□□□□□ -0.91
COPS3-201ENST00000268717 IGLV7-43P04211 117 aa9.34□□□□□ -0.91
COPS3-201ENST00000268717 Q8NBF4 154 aa9.33□□□□□ -0.92
COPS3-201ENST00000268717 SRRM2Q9UQ35 2752 aaKnown RBP9.32□□□□□ -0.92
COPS3-201ENST00000268717 SMR3BP02814 79 aaPredicted RBP9.32□□□□□ -0.92
COPS3-201ENST00000268717 A0A1W2PNM2 257 aa9.31□□□□□ -0.92
COPS3-201ENST00000268717 Q5VSD8 79 aa9.31□□□□□ -0.92
COPS3-201ENST00000268717 RPL37AP61513 92 aaKnown RBP9.29□□□□□ -0.92
COPS3-201ENST00000268717 Q6ZVQ6 151 aa9.29□□□□□ -0.92
COPS3-201ENST00000268717 CRYGAP11844 174 aa9.28□□□□□ -0.92
COPS3-201ENST00000268717 IGFL1Q6UW32 110 aa9.28□□□□□ -0.92
COPS3-201ENST00000268717 FAM229AH3BQW9 127 aa9.26□□□□□ -0.93
COPS3-201ENST00000268717 CXCL6P80162 114 aa9.24□□□□□ -0.93
COPS3-201ENST00000268717 NREPQ16612 68 aa9.23□□□□□ -0.93
COPS3-201ENST00000268717 IGKV3D-7A0A0C4DH55 119 aa9.22□□□□□ -0.93
COPS3-201ENST00000268717 FLG2Q5D862 2391 aaPredicted RBP9.22□□□□□ -0.93
COPS3-201ENST00000268717 MYCBP2O75592 4640 aa9.2□□□□□ -0.94
COPS3-201ENST00000268717 PCP4P48539 62 aa9.2□□□□□ -0.94
COPS3-201ENST00000268717 PLA2G1BP04054 148 aaKnown RBP9.18□□□□□ -0.94
COPS3-201ENST00000268717 C9orf153Q5TBE3 101 aa9.17□□□□□ -0.94
COPS3-201ENST00000268717 IGLV9-49A0A0B4J1Y8 123 aa9.16□□□□□ -0.94
COPS3-201ENST00000268717 A0A0G2JQZ4 141 aa9.16□□□□□ -0.94
COPS3-201ENST00000268717 FAM229BQ4G0N7 80 aa9.15□□□□□ -0.94
COPS3-201ENST00000268717 KRTAP10-4P60372 401 aaPredicted RBP9.14□□□□□ -0.95
COPS3-201ENST00000268717 HIST1H4AP62805 103 aaKnown RBP9.14□□□□□ -0.95
COPS3-201ENST00000268717 A0A087WSZ3 146 aa9.13□□□□□ -0.95
COPS3-201ENST00000268717 BPY2O14599 106 aa9.13□□□□□ -0.95
COPS3-201ENST00000268717 MOBPQ13875 183 aa9.13□□□□□ -0.95
COPS3-201ENST00000268717 PKHD1L1Q86WI1 4243 aa9.13□□□□□ -0.95
COPS3-201ENST00000268717 FAM236AA0A1B0GUQ0 79 aa9.13□□□□□ -0.95
COPS3-201ENST00000268717 FAM236BA0A1B0GV22 79 aa9.13□□□□□ -0.95
COPS3-201ENST00000268717 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
COPS3-201ENST00000268717 SSBP3-AS1Q7Z2R9 100 aa9.12□□□□□ -0.95
COPS3-201ENST00000268717 DMBT1Q9UGM3 2413 aaPredicted RBP9.12□□□□□ -0.95
COPS3-201ENST00000268717 SPINK6Q6UWN8 80 aa9.09□□□□□ -0.95
COPS3-201ENST00000268717 A0A087WVE0 104 aa9.09□□□□□ -0.95
COPS3-201ENST00000268717 CD164Q04900 197 aa9.09□□□□□ -0.95
COPS3-201ENST00000268717 SS18L2Q9UHA2 77 aa9.08□□□□□ -0.96
COPS3-201ENST00000268717 KRTAP1-4P0C5Y4 121 aa9.07□□□□□ -0.96
COPS3-201ENST00000268717 HERC1Q15751 4861 aa9.07□□□□□ -0.96
COPS3-201ENST00000268717 ATOX1O00244 68 aa9.06□□□□□ -0.96
COPS3-201ENST00000268717 ANAPC13Q9BS18 74 aa9.06□□□□□ -0.96
COPS3-201ENST00000268717 LRP1Q07954 4544 aaKnown RBP9.06□□□□□ -0.96
COPS3-201ENST00000268717 FAT3Q8TDW7 4589 aa9.05□□□□□ -0.96
COPS3-201ENST00000268717 IGKV4-1P06312 121 aa9.05□□□□□ -0.96
COPS3-201ENST00000268717 LINC00472Q9H8W2 130 aa9.05□□□□□ -0.96
COPS3-201ENST00000268717 J3KT08 172 aa9.03□□□□□ -0.96
COPS3-201ENST00000268717 DSCR10P59022 87 aa9.03□□□□□ -0.96
COPS3-201ENST00000268717 A0A087X002 238 aa9.02□□□□□ -0.96
COPS3-201ENST00000268717 KRTAP13-2Q52LG2 175 aa9.02□□□□□ -0.97
COPS3-201ENST00000268717 KRTAP29-1A8MX34 341 aaPredicted RBP9□□□□□ -0.97
COPS3-201ENST00000268717 Q8N9L7 120 aa8.99□□□□□ -0.97
COPS3-201ENST00000268717 J3QL48 77 aa8.98□□□□□ -0.97
COPS3-201ENST00000268717 HRCT1Q6UXD1 115 aa8.98□□□□□ -0.97
COPS3-201ENST00000268717 K7EQZ3 153 aa8.97□□□□□ -0.97
COPS3-201ENST00000268717 ASB16-AS1Q495Z4 193 aa8.97□□□□□ -0.97
COPS3-201ENST00000268717 Q5XG85 94 aa8.97□□□□□ -0.97
COPS3-201ENST00000268717 Q96NJ1 140 aa8.97□□□□□ -0.97
COPS3-201ENST00000268717 A8MWP4 228 aa8.96□□□□□ -0.98
COPS3-201ENST00000268717 SMIM20Q8N5G0 67 aa8.96□□□□□ -0.98
COPS3-201ENST00000268717 OXTP01178 125 aa8.95□□□□□ -0.98
COPS3-201ENST00000268717 DEFB116Q30KQ4 102 aa8.94□□□□□ -0.98
COPS3-201ENST00000268717 PRR15Q8IV56 129 aa8.94□□□□□ -0.98
COPS3-201ENST00000268717 SERP2Q8N6R1 65 aa8.93□□□□□ -0.98
COPS3-201ENST00000268717 TYMSOSQ8TAI1 123 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms