RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 SMIM29Q86T20 159 aa8.39□□□□□ -1.07
SSBP1-201ENST00000265304 Q6ZQY7 126 aa8.38□□□□□ -1.07
SSBP1-201ENST00000265304 C9orf118A6NHY6 69 aa8.37□□□□□ -1.07
SSBP1-201ENST00000265304 LST1O00453 97 aa8.37□□□□□ -1.07
SSBP1-201ENST00000265304 TRACP01848 142 aa8.37□□□□□ -1.07
SSBP1-201ENST00000265304 BATFQ16520 125 aa8.37□□□□□ -1.07
SSBP1-201ENST00000265304 CLEC2BQ92478 149 aa8.37□□□□□ -1.07
SSBP1-201ENST00000265304 SSBP3-AS1Q7Z2R9 100 aa8.36□□□□□ -1.07
SSBP1-201ENST00000265304 C3orf22Q8N5N4 141 aa8.35□□□□□ -1.07
SSBP1-201ENST00000265304 H3BQ85 93 aa8.34□□□□□ -1.07
SSBP1-201ENST00000265304 GHRHP01286 108 aa8.34□□□□□ -1.07
SSBP1-201ENST00000265304 COL5A1-AS1Q5SY13 56 aa8.34□□□□□ -1.07
SSBP1-201ENST00000265304 TYMSOSQ8TAI1 123 aa8.34□□□□□ -1.07
SSBP1-201ENST00000265304 PCP4L1A6NKN8 68 aa8.33□□□□□ -1.08
SSBP1-201ENST00000265304 SCGB1C2P0DMR2 95 aa8.33□□□□□ -1.08
SSBP1-201ENST00000265304 LAMTOR3Q9UHA4 124 aa8.33□□□□□ -1.08
SSBP1-201ENST00000265304 IGLV8-61A0A075B6I0 122 aa8.32□□□□□ -1.08
SSBP1-201ENST00000265304 TRBV20-1A0A075B6N2 111 aa8.32□□□□□ -1.08
SSBP1-201ENST00000265304 LYRM7Q5U5X0 104 aa8.32□□□□□ -1.08
SSBP1-201ENST00000265304 DEFB105AQ8NG35 78 aa8.32□□□□□ -1.08
SSBP1-201ENST00000265304 H3BUT2 72 aa8.31□□□□□ -1.08
SSBP1-201ENST00000265304 TCL1BO95988 128 aa8.31□□□□□ -1.08
SSBP1-201ENST00000265304 A0A1W2PPM0 123 aa8.3□□□□□ -1.08
SSBP1-201ENST00000265304 NAA38Q9BRA0 125 aaKnown RBP8.3□□□□□ -1.08
SSBP1-201ENST00000265304 Q8NBF4 154 aa8.29□□□□□ -1.08
SSBP1-201ENST00000265304 ATXN8Q156A1 80 aa8.28□□□□□ -1.08
SSBP1-201ENST00000265304 SPAG11AQ6PDA7 123 aa8.28□□□□□ -1.08
SSBP1-201ENST00000265304 HERC1Q15751 4861 aa8.28□□□□□ -1.08
SSBP1-201ENST00000265304 TMEM256-PLSCR3K7ERE1 68 aa8.27□□□□□ -1.09
SSBP1-201ENST00000265304 DNAL4O96015 105 aa8.27□□□□□ -1.09
SSBP1-201ENST00000265304 MOBPQ13875 183 aa8.27□□□□□ -1.09
SSBP1-201ENST00000265304 ORMDL1Q9P0S3 153 aa8.27□□□□□ -1.09
SSBP1-201ENST00000265304 IGLV9-49A0A0B4J1Y8 123 aa8.26□□□□□ -1.09
SSBP1-201ENST00000265304 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
SSBP1-201ENST00000265304 FABP2P12104 132 aa8.25□□□□□ -1.09
SSBP1-201ENST00000265304 NDUFV3P56181 108 aaKnown RBP8.25□□□□□ -1.09
SSBP1-201ENST00000265304 RPS29P62273 56 aaKnown RBP8.25□□□□□ -1.09
SSBP1-201ENST00000265304 CD164Q04900 197 aa8.25□□□□□ -1.09
SSBP1-201ENST00000265304 UBE2V1Q13404 147 aa8.25□□□□□ -1.09
SSBP1-201ENST00000265304 Q6JHZ5 121 aa8.24□□□□□ -1.09
SSBP1-201ENST00000265304 SPINK1P00995 79 aa8.23□□□□□ -1.09
SSBP1-201ENST00000265304 BAALC-AS2P0C853 105 aa8.22□□□□□ -1.09
SSBP1-201ENST00000265304 C9orf153Q5TBE3 101 aa8.22□□□□□ -1.09
SSBP1-201ENST00000265304 F8WEM9 126 aa8.21□□□□□ -1.1
SSBP1-201ENST00000265304 Q5XG85 94 aa8.2□□□□□ -1.1
SSBP1-201ENST00000265304 H3BMG7 143 aa8.18□□□□□ -1.1
SSBP1-201ENST00000265304 Q6Q795 121 aa8.18□□□□□ -1.1
SSBP1-201ENST00000265304 IGFL1Q6UW32 110 aa8.18□□□□□ -1.1
SSBP1-201ENST00000265304 SPCS1Q9Y6A9 102 aa8.18□□□□□ -1.1
SSBP1-201ENST00000265304 C9JAW5 83 aa8.15□□□□□ -1.1
SSBP1-201ENST00000265304 H3BT86 120 aa8.15□□□□□ -1.1
SSBP1-201ENST00000265304 K7EP34 96 aa8.15□□□□□ -1.1
SSBP1-201ENST00000265304 ANKRD29Q8N6D5 301 aa8.15□□□□□ -1.1
SSBP1-201ENST00000265304 OBSCN-AS1Q96MR7 158 aa8.15□□□□□ -1.1
SSBP1-201ENST00000265304 TRBV7-4A0A0J9YYF1 115 aa8.14□□□□□ -1.11
SSBP1-201ENST00000265304 A0A0G2JQZ4 141 aa8.13□□□□□ -1.11
SSBP1-201ENST00000265304 JMJD7-PLA2G4BH0Y9G9 81 aa8.12□□□□□ -1.11
SSBP1-201ENST00000265304 TEN1Q86WV5 123 aa8.12□□□□□ -1.11
SSBP1-201ENST00000265304 PRO0461Q9UI25 63 aa8.12□□□□□ -1.11
SSBP1-201ENST00000265304 RBM3P98179 157 aaKnown RBP8.11□□□□□ -1.11
SSBP1-201ENST00000265304 ASB16-AS1Q495Z4 193 aa8.11□□□□□ -1.11
SSBP1-201ENST00000265304 TRBV7-7A0A0K0K1E9 115 aa8.1□□□□□ -1.11
SSBP1-201ENST00000265304 A0A1W2PNM2 257 aa8.09□□□□□ -1.11
SSBP1-201ENST00000265304 GTF2H5Q6ZYL4 71 aa8.09□□□□□ -1.11
SSBP1-201ENST00000265304 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
SSBP1-201ENST00000265304 LOC110117498A0A087WWA1 95 aa8.08□□□□□ -1.12
SSBP1-201ENST00000265304 HMCN2Q8NDA2 5059 aa8.08□□□□□ -1.12
SSBP1-201ENST00000265304 PDE6GP18545 87 aa8.07□□□□□ -1.12
SSBP1-201ENST00000265304 FP248Q71RG6 208 aaPredicted RBP8.07□□□□□ -1.12
SSBP1-201ENST00000265304 A0A1B0GW54 56 aa8.06□□□□□ -1.12
SSBP1-201ENST00000265304 DSCR8Q96T75 97 aa8.06□□□□□ -1.12
SSBP1-201ENST00000265304 C21orf62-AS1Q17RA5 79 aa8.05□□□□□ -1.12
SSBP1-201ENST00000265304 XP32Q5T750 250 aa8.05□□□□□ -1.12
SSBP1-201ENST00000265304 HRCT1Q6UXD1 115 aa8.05□□□□□ -1.12
SSBP1-201ENST00000265304 F8W1H4 67 aa8.04□□□□□ -1.12
SSBP1-201ENST00000265304 Q6ZQT0 140 aa8.04□□□□□ -1.12
SSBP1-201ENST00000265304 MTURNQ8N3F0 131 aa8.03□□□□□ -1.12
SSBP1-201ENST00000265304 CCKP06307 115 aa8.02□□□□□ -1.13
SSBP1-201ENST00000265304 C1orf195Q5TG92 126 aa8.02□□□□□ -1.13
SSBP1-201ENST00000265304 SS18L2Q9UHA2 77 aa8.01□□□□□ -1.13
SSBP1-201ENST00000265304 RETNLBQ9BQ08 111 aa8□□□□□ -1.13
SSBP1-201ENST00000265304 C14orf132Q9NPU4 83 aa7.99□□□□□ -1.13
SSBP1-201ENST00000265304 A0A087WSZ3 146 aa7.98□□□□□ -1.13
SSBP1-201ENST00000265304 A0A1B0GV72 72 aa7.98□□□□□ -1.13
SSBP1-201ENST00000265304 IGLV7-46A0A075B6I9 117 aa7.97□□□□□ -1.13
SSBP1-201ENST00000265304 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
SSBP1-201ENST00000265304 PRR4Q16378 134 aa7.96□□□□□ -1.14
SSBP1-201ENST00000265304 Q96NJ1 140 aa7.96□□□□□ -1.14
SSBP1-201ENST00000265304 LRP2P98164 4655 aa7.96□□□□□ -1.14
SSBP1-201ENST00000265304 A0A1B0GV90 55 aa7.95□□□□□ -1.14
SSBP1-201ENST00000265304 KRTAP13-3Q3SY46 172 aa7.94□□□□□ -1.14
SSBP1-201ENST00000265304 LINC00472Q9H8W2 130 aa7.94□□□□□ -1.14
SSBP1-201ENST00000265304 LPAP08519 4548 aa7.93□□□□□ -1.14
SSBP1-201ENST00000265304 ETDBQ3ZM63 59 aa7.91□□□□□ -1.14
SSBP1-201ENST00000265304 VPS25Q9BRG1 176 aa7.9□□□□□ -1.14
SSBP1-201ENST00000265304 J3KT08 172 aa7.84□□□□□ -1.15
SSBP1-201ENST00000265304 KRTAP4-8Q9BYQ9 185 aa7.84□□□□□ -1.15
SSBP1-201ENST00000265304 IGKV4-1P06312 121 aa7.8□□□□□ -1.16
SSBP1-201ENST00000265304 NREPQ16612 68 aa7.8□□□□□ -1.16
SSBP1-201ENST00000265304 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms