RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 FAM229BQ4G0N7 80 aa5.09□□□□□ -1.59
GTF3C3-201ENST00000263956 AKAP9Q99996 3911 aa5.09□□□□□ -1.59
GTF3C3-201ENST00000263956 IGLV5-48A0A075B6I7 105 aa5.08□□□□□ -1.6
GTF3C3-201ENST00000263956 PRR4Q16378 134 aa5.07□□□□□ -1.6
GTF3C3-201ENST00000263956 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
GTF3C3-201ENST00000263956 MT-ATP8P03928 68 aa5.07□□□□□ -1.6
GTF3C3-201ENST00000263956 IMUPQ9GZP8 106 aa5.06□□□□□ -1.6
GTF3C3-201ENST00000263956 TRBV7-7A0A0K0K1E9 115 aa5.06□□□□□ -1.6
GTF3C3-201ENST00000263956 SPINK1P00995 79 aa5.06□□□□□ -1.6
GTF3C3-201ENST00000263956 TGP01266 2768 aa5.06□□□□□ -1.6
GTF3C3-201ENST00000263956 LINC01547P58512 204 aaPredicted RBP5.05□□□□□ -1.6
GTF3C3-201ENST00000263956 CASC2Q6XLA1 102 aa5.05□□□□□ -1.6
GTF3C3-201ENST00000263956 ZNF469Q96JG9 3925 aaPredicted RBP5.04□□□□□ -1.6
GTF3C3-201ENST00000263956 A0A0G2JQZ4 141 aa5.04□□□□□ -1.6
GTF3C3-201ENST00000263956 PCP4P48539 62 aa5.04□□□□□ -1.6
GTF3C3-201ENST00000263956 CXCL6P80162 114 aa5.04□□□□□ -1.6
GTF3C3-201ENST00000263956 FBN3Q75N90 2809 aa5.04□□□□□ -1.6
GTF3C3-201ENST00000263956 SPRR1BP22528 89 aa5.03□□□□□ -1.6
GTF3C3-201ENST00000263956 TRRAPQ9Y4A5 3859 aa5.03□□□□□ -1.6
GTF3C3-201ENST00000263956 CD164Q04900 197 aa5.03□□□□□ -1.6
GTF3C3-201ENST00000263956 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
GTF3C3-201ENST00000263956 KRTAP7-1Q8IUC3 87 aa5.02□□□□□ -1.61
GTF3C3-201ENST00000263956 A0A1W2PNM2 257 aa5.01□□□□□ -1.61
GTF3C3-201ENST00000263956 LINC00313P59037 77 aa5.01□□□□□ -1.61
GTF3C3-201ENST00000263956 HCG22E2RYF7 251 aa5.01□□□□□ -1.61
GTF3C3-201ENST00000263956 Q8N9L7 120 aa5□□□□□ -1.61
GTF3C3-201ENST00000263956 Q6ZSA8 131 aa5□□□□□ -1.61
GTF3C3-201ENST00000263956 C8orf87E5RJ46 101 aa5□□□□□ -1.61
GTF3C3-201ENST00000263956 KRTAP11-1Q8IUC1 163 aa4.99□□□□□ -1.61
GTF3C3-201ENST00000263956 A0A087WVE0 104 aa4.99□□□□□ -1.61
GTF3C3-201ENST00000263956 hDV103S1A0JD37 113 aa4.98□□□□□ -1.61
GTF3C3-201ENST00000263956 A8MWP4 228 aa4.98□□□□□ -1.61
GTF3C3-201ENST00000263956 CDIP1Q9H305 208 aa4.98□□□□□ -1.61
GTF3C3-201ENST00000263956 VPS13CQ709C8 3753 aa4.98□□□□□ -1.61
GTF3C3-201ENST00000263956 Q96NJ1 140 aa4.97□□□□□ -1.61
GTF3C3-201ENST00000263956 LINC00483Q53H64 154 aa4.97□□□□□ -1.61
GTF3C3-201ENST00000263956 Q6Q795 121 aa4.97□□□□□ -1.61
GTF3C3-201ENST00000263956 SMIM29Q86T20 159 aa4.97□□□□□ -1.61
GTF3C3-201ENST00000263956 Q8N1X5 172 aa4.97□□□□□ -1.61
GTF3C3-201ENST00000263956 OBSCN-AS1Q96MR7 158 aa4.96□□□□□ -1.61
GTF3C3-201ENST00000263956 RETNLBQ9BQ08 111 aa4.96□□□□□ -1.61
GTF3C3-201ENST00000263956 IGLV8-61A0A075B6I0 122 aa4.96□□□□□ -1.62
GTF3C3-201ENST00000263956 LINC01600Q96MT4 127 aa4.96□□□□□ -1.62
GTF3C3-201ENST00000263956 C20orf197Q8N268 126 aa4.95□□□□□ -1.62
GTF3C3-201ENST00000263956 A0A1B0GVX0 72 aa4.94□□□□□ -1.62
GTF3C3-201ENST00000263956 ATP11AUNQ6ZP68 121 aa4.94□□□□□ -1.62
GTF3C3-201ENST00000263956 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
GTF3C3-201ENST00000263956 TP53AIP1Q9HCN2 124 aa4.94□□□□□ -1.62
GTF3C3-201ENST00000263956 PRR15Q8IV56 129 aa4.94□□□□□ -1.62
GTF3C3-201ENST00000263956 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
GTF3C3-201ENST00000263956 IGLV7-46A0A075B6I9 117 aa4.93□□□□□ -1.62
GTF3C3-201ENST00000263956 DSCR10P59022 87 aa4.93□□□□□ -1.62
GTF3C3-201ENST00000263956 TRAV7A0A075B6U4 112 aa4.93□□□□□ -1.62
GTF3C3-201ENST00000263956 C9orf92A6NGG3 77 aa4.93□□□□□ -1.62
GTF3C3-201ENST00000263956 CHKB-CPT1BH3BT56 60 aa4.93□□□□□ -1.62
GTF3C3-201ENST00000263956 K7EQZ3 153 aa4.93□□□□□ -1.62
GTF3C3-201ENST00000263956 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
GTF3C3-201ENST00000263956 LINC00208Q96KT6 92 aa4.92□□□□□ -1.62
GTF3C3-201ENST00000263956 C8orf17Q9NRJ1 99 aa4.92□□□□□ -1.62
GTF3C3-201ENST00000263956 MRPL34Q9BQ48 92 aaKnown RBP4.92□□□□□ -1.62
GTF3C3-201ENST00000263956 A0A087X002 238 aa4.91□□□□□ -1.62
GTF3C3-201ENST00000263956 UQCRQO14949 82 aa4.91□□□□□ -1.62
GTF3C3-201ENST00000263956 OXTP01178 125 aa4.91□□□□□ -1.62
GTF3C3-201ENST00000263956 H0Y9P7 68 aa4.91□□□□□ -1.62
GTF3C3-201ENST00000263956 DMBT1Q9UGM3 2413 aaPredicted RBP4.9□□□□□ -1.62
GTF3C3-201ENST00000263956 C5orf47Q569G3 176 aa4.9□□□□□ -1.63
GTF3C3-201ENST00000263956 MEGF8Q7Z7M0 2845 aa4.9□□□□□ -1.63
GTF3C3-201ENST00000263956 IGKV2D-30A0A075B6S6 120 aa4.89□□□□□ -1.63
GTF3C3-201ENST00000263956 IGKV2-30P06310 120 aa4.89□□□□□ -1.63
GTF3C3-201ENST00000263956 FAM236DA0A1B0GTK5 79 aa4.89□□□□□ -1.63
GTF3C3-201ENST00000263956 FAM236CP0DP71 79 aa4.89□□□□□ -1.63
GTF3C3-201ENST00000263956 FLG2Q5D862 2391 aaPredicted RBP4.88□□□□□ -1.63
GTF3C3-201ENST00000263956 TMEM254Q8TBM7 123 aa4.88□□□□□ -1.63
GTF3C3-201ENST00000263956 COX7CP15954 63 aa4.87□□□□□ -1.63
GTF3C3-201ENST00000263956 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
GTF3C3-201ENST00000263956 NDUFC1O43677 76 aa4.86□□□□□ -1.63
GTF3C3-201ENST00000263956 C1orf64Q8NEQ6 169 aa4.86□□□□□ -1.63
GTF3C3-201ENST00000263956 TRAV22A0A0B4J277 110 aa4.85□□□□□ -1.63
GTF3C3-201ENST00000263956 PCOTHQ58A44 107 aa4.84□□□□□ -1.63
GTF3C3-201ENST00000263956 C1orf195Q5TG92 126 aa4.84□□□□□ -1.63
GTF3C3-201ENST00000263956 KRTAP13-2Q52LG2 175 aa4.84□□□□□ -1.64
GTF3C3-201ENST00000263956 FP248Q71RG6 208 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-201ENST00000263956 LINC00472Q9H8W2 130 aa4.83□□□□□ -1.64
GTF3C3-201ENST00000263956 H3BPC8 53 aa4.82□□□□□ -1.64
GTF3C3-201ENST00000263956 HUWE1Q7Z6Z7 4374 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-201ENST00000263956 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-201ENST00000263956 CUBNO60494 3623 aa4.8□□□□□ -1.64
GTF3C3-201ENST00000263956 LOC101927531A0A1B0GV80 90 aa4.8□□□□□ -1.64
GTF3C3-201ENST00000263956 KRTAP1-4P0C5Y4 121 aa4.78□□□□□ -1.64
GTF3C3-201ENST00000263956 TMEM258P61165 79 aa4.78□□□□□ -1.64
GTF3C3-201ENST00000263956 SEC61GP60059 68 aa4.78□□□□□ -1.64
GTF3C3-201ENST00000263956 SPTSSBQ8NFR3 76 aa4.78□□□□□ -1.64
GTF3C3-201ENST00000263956 ATP5EP56381 51 aaPredicted RBP4.77□□□□□ -1.65
GTF3C3-201ENST00000263956 COX6B2Q6YFQ2 88 aa4.77□□□□□ -1.65
GTF3C3-201ENST00000263956 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
GTF3C3-201ENST00000263956 DNAH9Q9NYC9 4486 aa4.76□□□□□ -1.65
GTF3C3-201ENST00000263956 CCDC179H3BU77 68 aa4.76□□□□□ -1.65
GTF3C3-201ENST00000263956 Q5XG85 94 aa4.76□□□□□ -1.65
GTF3C3-201ENST00000263956 C7orf65Q6ZTY9 151 aa4.76□□□□□ -1.65
GTF3C3-201ENST00000263956 MMP24-AS1A0A0U1RRL7 71 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms