RNA–Protein interactions for RNA: ENST00000263857.10

POLR1A-201, Transcript of RNA polymerase I subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1A, Length 12,749 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-201ENST00000263857 C9orf163Q8N9P6 203 aa4.47□□□□□ -1.69
POLR1A-201ENST00000263857 PRUNE2Q8WUY3 3088 aa4.47□□□□□ -1.69
POLR1A-201ENST00000263857 VPS13AQ96RL7 3174 aa4.46□□□□□ -1.7
POLR1A-201ENST00000263857 WWC2-AS2Q96NR7 200 aa4.46□□□□□ -1.7
POLR1A-201ENST00000263857 TNP2Q05952 138 aa4.45□□□□□ -1.7
POLR1A-201ENST00000263857 LITAFQ99732 161 aa4.45□□□□□ -1.7
POLR1A-201ENST00000263857 TLX1NBP0CAT3 122 aa4.44□□□□□ -1.7
POLR1A-201ENST00000263857 IGLV7-43P04211 117 aa4.44□□□□□ -1.7
POLR1A-201ENST00000263857 ASB16-AS1Q495Z4 193 aa4.44□□□□□ -1.7
POLR1A-201ENST00000263857 FBN2P35556 2912 aa4.44□□□□□ -1.7
POLR1A-201ENST00000263857 Q8NAQ8 132 aa4.44□□□□□ -1.7
POLR1A-201ENST00000263857 SPINK7P58062 85 aa4.43□□□□□ -1.7
POLR1A-201ENST00000263857 ZNF575Q86XF7 245 aa4.43□□□□□ -1.7
POLR1A-201ENST00000263857 CDSNQ15517 529 aa4.42□□□□□ -1.7
POLR1A-201ENST00000263857 Q6ZSA8 131 aa4.42□□□□□ -1.7
POLR1A-201ENST00000263857 FAM168BA1KXE4 195 aa4.42□□□□□ -1.7
POLR1A-201ENST00000263857 C9orf92A6NGG3 77 aa4.42□□□□□ -1.7
POLR1A-201ENST00000263857 C5orf42Q9H799 3197 aa4.42□□□□□ -1.7
POLR1A-201ENST00000263857 COL12A1Q99715 3063 aa4.42□□□□□ -1.7
POLR1A-201ENST00000263857 FREM2Q5SZK8 3169 aa4.42□□□□□ -1.7
POLR1A-201ENST00000263857 WISP2O76076 250 aa4.41□□□□□ -1.7
POLR1A-201ENST00000263857 SPRR4Q96PI1 79 aa4.41□□□□□ -1.7
POLR1A-201ENST00000263857 CSAG1Q6PB30 78 aa4.4□□□□□ -1.7
POLR1A-201ENST00000263857 CNBPP62633 177 aaKnown RBP4.4□□□□□ -1.7
POLR1A-201ENST00000263857 Q8N1X5 172 aa4.4□□□□□ -1.7
POLR1A-201ENST00000263857 IGLV7-46A0A075B6I9 117 aa4.4□□□□□ -1.71
POLR1A-201ENST00000263857 PRR34Q9NV39 138 aa4.4□□□□□ -1.71
POLR1A-201ENST00000263857 PCNTO95613 3336 aa4.4□□□□□ -1.71
POLR1A-201ENST00000263857 SMR3AQ99954 134 aa4.4□□□□□ -1.71
POLR1A-201ENST00000263857 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.38□□□□□ -1.71
POLR1A-201ENST00000263857 Q8N377 158 aa4.38□□□□□ -1.71
POLR1A-201ENST00000263857 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
POLR1A-201ENST00000263857 FAM229BQ4G0N7 80 aa4.38□□□□□ -1.71
POLR1A-201ENST00000263857 OCR1Q9BZK8 76 aa4.37□□□□□ -1.71
POLR1A-201ENST00000263857 S4R3F8 94 aa4.37□□□□□ -1.71
POLR1A-201ENST00000263857 COL4A2P08572 1712 aa4.37□□□□□ -1.71
POLR1A-201ENST00000263857 PSORS1C2Q9UIG4 136 aa4.37□□□□□ -1.71
POLR1A-201ENST00000263857 DMXL1Q9Y485 3027 aa4.36□□□□□ -1.71
POLR1A-201ENST00000263857 KLK9Q2XQG4 91 aa4.36□□□□□ -1.71
POLR1A-201ENST00000263857 PRR26Q8N8Z3 221 aa4.36□□□□□ -1.71
POLR1A-201ENST00000263857 M0R2T5 61 aa4.35□□□□□ -1.71
POLR1A-201ENST00000263857 ROMO1P60602 79 aa4.34□□□□□ -1.71
POLR1A-201ENST00000263857 KRTAP10-9P60411 292 aa4.34□□□□□ -1.71
POLR1A-201ENST00000263857 KRTAP16-1A8MUX0 517 aa4.34□□□□□ -1.71
POLR1A-201ENST00000263857 A0A087WTM6 91 aa4.34□□□□□ -1.72
POLR1A-201ENST00000263857 MXRA5Q9NR99 2828 aa4.33□□□□□ -1.72
POLR1A-201ENST00000263857 ZCCHC13Q8WW36 166 aaKnown RBP4.33□□□□□ -1.72
POLR1A-201ENST00000263857 LAMA1P25391 3075 aa4.32□□□□□ -1.72
POLR1A-201ENST00000263857 HTTP42858 3142 aa4.32□□□□□ -1.72
POLR1A-201ENST00000263857 Q8N9P0 234 aaPredicted RBP4.32□□□□□ -1.72
POLR1A-201ENST00000263857 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
POLR1A-201ENST00000263857 R4GN34 69 aa4.31□□□□□ -1.72
POLR1A-201ENST00000263857 C19orf73Q9NVV2 129 aa4.3□□□□□ -1.72
POLR1A-201ENST00000263857 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
POLR1A-201ENST00000263857 WDFY4Q6ZS81 3184 aa4.3□□□□□ -1.72
POLR1A-201ENST00000263857 A0A1W2PNM2 257 aa4.3□□□□□ -1.72
POLR1A-201ENST00000263857 PLAC4Q8WY50 150 aa4.29□□□□□ -1.72
POLR1A-201ENST00000263857 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
POLR1A-201ENST00000263857 A0A1W2PPR1 153 aa4.28□□□□□ -1.72
POLR1A-201ENST00000263857 SEC61BP60468 96 aaKnown RBP4.28□□□□□ -1.72
POLR1A-201ENST00000263857 GOLGB1Q14789 3259 aaKnown RBP4.27□□□□□ -1.73
POLR1A-201ENST00000263857 TENM2Q9NT68 2774 aa4.27□□□□□ -1.73
POLR1A-201ENST00000263857 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
POLR1A-201ENST00000263857 REV3LO60673 3130 aa4.26□□□□□ -1.73
POLR1A-201ENST00000263857 Q5VV11 94 aa4.26□□□□□ -1.73
POLR1A-201ENST00000263857 COL7A1Q02388 2944 aa4.24□□□□□ -1.73
POLR1A-201ENST00000263857 C10orf142B7Z368 130 aa4.24□□□□□ -1.73
POLR1A-201ENST00000263857 GIG44P09565 113 aaPredicted RBP4.24□□□□□ -1.73
POLR1A-201ENST00000263857 ADGRG4Q8IZF6 3080 aa4.24□□□□□ -1.73
POLR1A-201ENST00000263857 KRTAP24-1Q3LI83 254 aa4.24□□□□□ -1.73
POLR1A-201ENST00000263857 Q5XG85 94 aa4.23□□□□□ -1.73
POLR1A-201ENST00000263857 ATMQ13315 3056 aa4.22□□□□□ -1.73
POLR1A-201ENST00000263857 K7EIL1 84 aa4.22□□□□□ -1.73
POLR1A-201ENST00000263857 Q5W150 140 aa4.21□□□□□ -1.74
POLR1A-201ENST00000263857 ANAPC11Q9NYG5 84 aa4.21□□□□□ -1.74
POLR1A-201ENST00000263857 MMP24-AS1A0A0U1RRL7 71 aa4.21□□□□□ -1.74
POLR1A-201ENST00000263857 BOD1L1Q8NFC6 3051 aa4.21□□□□□ -1.74
POLR1A-201ENST00000263857 FP248Q71RG6 208 aaPredicted RBP4.21□□□□□ -1.74
POLR1A-201ENST00000263857 A0A0G2JQZ4 141 aa4.2□□□□□ -1.74
POLR1A-201ENST00000263857 A0A1W2PNN7 141 aa4.2□□□□□ -1.74
POLR1A-201ENST00000263857 M0QZ58 72 aa4.19□□□□□ -1.74
POLR1A-201ENST00000263857 RANBP2P49792 3224 aaKnown RBP4.19□□□□□ -1.74
POLR1A-201ENST00000263857 SMR3BP02814 79 aaPredicted RBP4.18□□□□□ -1.74
POLR1A-201ENST00000263857 CELSR1Q9NYQ6 3014 aa4.15□□□□□ -1.74
POLR1A-201ENST00000263857 KRTAP10-11P60412 298 aa4.15□□□□□ -1.74
POLR1A-201ENST00000263857 PANO1I0J062 215 aa4.15□□□□□ -1.75
POLR1A-201ENST00000263857 Q6ZR54 194 aa4.13□□□□□ -1.75
POLR1A-201ENST00000263857 SPRR1BP22528 89 aa4.13□□□□□ -1.75
POLR1A-201ENST00000263857 A0A087X002 238 aa4.13□□□□□ -1.75
POLR1A-201ENST00000263857 HRNRQ86YZ3 2850 aaPredicted RBP4.12□□□□□ -1.75
POLR1A-201ENST00000263857 LINC00472Q9H8W2 130 aa4.12□□□□□ -1.75
POLR1A-201ENST00000263857 SPATA8Q6RVD6 105 aa4.12□□□□□ -1.75
POLR1A-201ENST00000263857 PLAC8Q9NZF1 115 aa4.12□□□□□ -1.75
POLR1A-201ENST00000263857 FBN1P35555 2871 aaKnown RBP4.11□□□□□ -1.75
POLR1A-201ENST00000263857 C20orf166-AS1Q96NR2 134 aa4.11□□□□□ -1.75
POLR1A-201ENST00000263857 SPRR1AP35321 89 aa4.1□□□□□ -1.75
POLR1A-201ENST00000263857 ADM2Q7Z4H4 148 aa4.09□□□□□ -1.76
POLR1A-201ENST00000263857 KRTAP25-1Q3LHN0 102 aa4.08□□□□□ -1.76
POLR1A-201ENST00000263857 MKI67P46013 3256 aaKnown RBP4.07□□□□□ -1.76
POLR1A-201ENST00000263857 A0A096LNT2 108 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms