RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 LINC00476Q8WZB0 136 aa8.1□□□□□ -1.11
LIG1-201ENST00000263274 A0A087WSZ3 146 aa8.09□□□□□ -1.11
LIG1-201ENST00000263274 KRTAP7-1Q8IUC3 87 aa8.08□□□□□ -1.12
LIG1-201ENST00000263274 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
LIG1-201ENST00000263274 SRRM2Q9UQ35 2752 aaKnown RBP8.08□□□□□ -1.12
LIG1-201ENST00000263274 CHTF8P0CG12 524 aa8.07□□□□□ -1.12
LIG1-201ENST00000263274 TLX1NBP0CAT3 122 aa8.07□□□□□ -1.12
LIG1-201ENST00000263274 RPL37AP61513 92 aaKnown RBP8.07□□□□□ -1.12
LIG1-201ENST00000263274 UBE2AP49459 152 aa8.06□□□□□ -1.12
LIG1-201ENST00000263274 SPTSSBQ8NFR3 76 aa8.05□□□□□ -1.12
LIG1-201ENST00000263274 DNHD1Q96M86 4753 aa8.05□□□□□ -1.12
LIG1-201ENST00000263274 hDV103S1A0JD37 113 aa8.05□□□□□ -1.12
LIG1-201ENST00000263274 KRTAP4-16G5E9R7 235 aaPredicted RBP8.05□□□□□ -1.12
LIG1-201ENST00000263274 DSCR10P59022 87 aa8.05□□□□□ -1.12
LIG1-201ENST00000263274 A8MU10 97 aa8.04□□□□□ -1.12
LIG1-201ENST00000263274 A8MUN3 132 aa8.04□□□□□ -1.12
LIG1-201ENST00000263274 TRAV22A0A0B4J277 110 aa8.03□□□□□ -1.12
LIG1-201ENST00000263274 IGFL1Q6UW32 110 aa8.03□□□□□ -1.12
LIG1-201ENST00000263274 PLA2G2DQ9UNK4 145 aa8.03□□□□□ -1.12
LIG1-201ENST00000263274 SPRR1AP35321 89 aa8.02□□□□□ -1.12
LIG1-201ENST00000263274 PHF5AQ7RTV0 110 aaKnown RBP8.02□□□□□ -1.12
LIG1-201ENST00000263274 HCG22E2RYF7 251 aa8.01□□□□□ -1.13
LIG1-201ENST00000263274 TNP2Q05952 138 aa8.01□□□□□ -1.13
LIG1-201ENST00000263274 K7EIL1 84 aa7.99□□□□□ -1.13
LIG1-201ENST00000263274 LINC00208Q96KT6 92 aa7.99□□□□□ -1.13
LIG1-201ENST00000263274 KRTAP1-5Q9BYS1 174 aa7.99□□□□□ -1.13
LIG1-201ENST00000263274 ANK2Q01484 3957 aa7.99□□□□□ -1.13
LIG1-201ENST00000263274 IGLV5-37A0A075B6J1 123 aa7.99□□□□□ -1.13
LIG1-201ENST00000263274 C8orf87E5RJ46 101 aa7.98□□□□□ -1.13
LIG1-201ENST00000263274 CHKB-CPT1BH3BT56 60 aa7.98□□□□□ -1.13
LIG1-201ENST00000263274 SPRR4Q96PI1 79 aa7.98□□□□□ -1.13
LIG1-201ENST00000263274 H0Y9J4 135 aa7.98□□□□□ -1.13
LIG1-201ENST00000263274 Q1T7F1 81 aa7.98□□□□□ -1.13
LIG1-201ENST00000263274 MP68P56378 58 aa7.97□□□□□ -1.13
LIG1-201ENST00000263274 PRR26Q8N8Z3 221 aa7.96□□□□□ -1.13
LIG1-201ENST00000263274 C16orf90A8MZG2 172 aa7.96□□□□□ -1.14
LIG1-201ENST00000263274 A0A1B0GW54 56 aa7.95□□□□□ -1.14
LIG1-201ENST00000263274 KTN1-AS1Q86SY8 53 aa7.95□□□□□ -1.14
LIG1-201ENST00000263274 IGLV9-49A0A0B4J1Y8 123 aa7.93□□□□□ -1.14
LIG1-201ENST00000263274 COL7A1Q02388 2944 aa7.92□□□□□ -1.14
LIG1-201ENST00000263274 KRTAP11-1Q8IUC1 163 aa7.92□□□□□ -1.14
LIG1-201ENST00000263274 CASC2Q6XLA1 102 aa7.92□□□□□ -1.14
LIG1-201ENST00000263274 PRR15LQ9BU68 103 aa7.91□□□□□ -1.14
LIG1-201ENST00000263274 MEGF8Q7Z7M0 2845 aa7.91□□□□□ -1.14
LIG1-201ENST00000263274 B9D2Q9BPU9 175 aa7.9□□□□□ -1.14
LIG1-201ENST00000263274 A6NED7 52 aa7.88□□□□□ -1.15
LIG1-201ENST00000263274 H0Y9P7 68 aa7.88□□□□□ -1.15
LIG1-201ENST00000263274 NDUFS5O43920 106 aa7.87□□□□□ -1.15
LIG1-201ENST00000263274 C14orf177Q52M58 125 aa7.86□□□□□ -1.15
LIG1-201ENST00000263274 Q5VV11 94 aa7.86□□□□□ -1.15
LIG1-201ENST00000263274 FBN3Q75N90 2809 aa7.85□□□□□ -1.15
LIG1-201ENST00000263274 NDUFB1O75438 58 aa7.85□□□□□ -1.15
LIG1-201ENST00000263274 CNBPP62633 177 aaKnown RBP7.84□□□□□ -1.15
LIG1-201ENST00000263274 PANO1I0J062 215 aa7.84□□□□□ -1.16
LIG1-201ENST00000263274 PCOTHQ58A44 107 aa7.84□□□□□ -1.16
LIG1-201ENST00000263274 DNAH10Q8IVF4 4471 aa7.82□□□□□ -1.16
LIG1-201ENST00000263274 ANAPC11Q9NYG5 84 aa7.82□□□□□ -1.16
LIG1-201ENST00000263274 ZCCHC13Q8WW36 166 aaKnown RBP7.81□□□□□ -1.16
LIG1-201ENST00000263274 C9orf163Q8N9P6 203 aa7.81□□□□□ -1.16
LIG1-201ENST00000263274 CYP4F30PQ9H0H9 118 aa7.8□□□□□ -1.16
LIG1-201ENST00000263274 APLNQ9ULZ1 77 aa7.8□□□□□ -1.16
LIG1-201ENST00000263274 A8MWP4 228 aa7.8□□□□□ -1.16
LIG1-201ENST00000263274 CDK2AP2O75956 126 aa7.79□□□□□ -1.16
LIG1-201ENST00000263274 IGHV6-1A0A0B4J1U7 121 aa7.79□□□□□ -1.16
LIG1-201ENST00000263274 LCE6AA0A183 80 aa7.79□□□□□ -1.16
LIG1-201ENST00000263274 SPINK6Q6UWN8 80 aa7.78□□□□□ -1.16
LIG1-201ENST00000263274 LIMD2Q9BT23 127 aa7.78□□□□□ -1.16
LIG1-201ENST00000263274 NBDYA0A0U1RRE5 68 aa7.77□□□□□ -1.16
LIG1-201ENST00000263274 Q8N9P0 234 aaPredicted RBP7.77□□□□□ -1.16
LIG1-201ENST00000263274 IGLV8-61A0A075B6I0 122 aa7.77□□□□□ -1.17
LIG1-201ENST00000263274 LYSTQ99698 3801 aa7.76□□□□□ -1.17
LIG1-201ENST00000263274 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
LIG1-201ENST00000263274 LINC00472Q9H8W2 130 aa7.76□□□□□ -1.17
LIG1-201ENST00000263274 KRTAP29-1A8MX34 341 aaPredicted RBP7.75□□□□□ -1.17
LIG1-201ENST00000263274 HUWE1Q7Z6Z7 4374 aaKnown RBP7.75□□□□□ -1.17
LIG1-201ENST00000263274 MOBPQ13875 183 aa7.74□□□□□ -1.17
LIG1-201ENST00000263274 LCA10Q71F78 164 aa7.74□□□□□ -1.17
LIG1-201ENST00000263274 ATP11AUNQ6ZP68 121 aa7.73□□□□□ -1.17
LIG1-201ENST00000263274 SPAG11AQ6PDA7 123 aa7.71□□□□□ -1.18
LIG1-201ENST00000263274 MMP24-AS1A0A0U1RRL7 71 aa7.7□□□□□ -1.18
LIG1-201ENST00000263274 SPRR1BP22528 89 aa7.7□□□□□ -1.18
LIG1-201ENST00000263274 CMYA5Q8N3K9 4069 aa7.69□□□□□ -1.18
LIG1-201ENST00000263274 COA5Q86WW8 74 aa7.68□□□□□ -1.18
LIG1-201ENST00000263274 PRAC1Q96KF2 57 aa7.68□□□□□ -1.18
LIG1-201ENST00000263274 KRTAP21-3Q3LHN1 58 aa7.67□□□□□ -1.18
LIG1-201ENST00000263274 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
LIG1-201ENST00000263274 PSORS1C2Q9UIG4 136 aa7.67□□□□□ -1.18
LIG1-201ENST00000263274 CIRBP-AS1Q8TBR5 109 aa7.67□□□□□ -1.18
LIG1-201ENST00000263274 PRKDCP78527 4128 aaKnown RBP7.66□□□□□ -1.18
LIG1-201ENST00000263274 NUPR2A6NF83 97 aa7.66□□□□□ -1.18
LIG1-201ENST00000263274 C8orf17Q9NRJ1 99 aa7.66□□□□□ -1.18
LIG1-201ENST00000263274 DNAH9Q9NYC9 4486 aa7.65□□□□□ -1.18
LIG1-201ENST00000263274 A6NN06 94 aa7.65□□□□□ -1.18
LIG1-201ENST00000263274 RTL8CO15255 209 aa7.65□□□□□ -1.18
LIG1-201ENST00000263274 H3BPC8 53 aa7.65□□□□□ -1.19
LIG1-201ENST00000263274 LOC101927531A0A1B0GV80 90 aa7.64□□□□□ -1.19
LIG1-201ENST00000263274 A0A087WTM6 91 aa7.64□□□□□ -1.19
LIG1-201ENST00000263274 Q75L30 129 aa7.64□□□□□ -1.19
LIG1-201ENST00000263274 CDC42SE1Q9NRR8 79 aa7.63□□□□□ -1.19
LIG1-201ENST00000263274 SPACA4Q8TDM5 124 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms