RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 COL6A3P12111 3177 aa6.47□□□□□ -1.37
PHF3-201ENST00000262043 MAP1AP78559 2803 aaPredicted RBP6.47□□□□□ -1.37
PHF3-201ENST00000262043 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
PHF3-201ENST00000262043 TNP2Q05952 138 aa6.45□□□□□ -1.38
PHF3-201ENST00000262043 OCR1Q9BZK8 76 aa6.45□□□□□ -1.38
PHF3-201ENST00000262043 DSPP15924 2871 aaKnown RBP6.44□□□□□ -1.38
PHF3-201ENST00000262043 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.43□□□□□ -1.38
PHF3-201ENST00000262043 CD164Q04900 197 aa6.42□□□□□ -1.38
PHF3-201ENST00000262043 LCA10Q71F78 164 aa6.41□□□□□ -1.38
PHF3-201ENST00000262043 KALRNO60229 2985 aa6.4□□□□□ -1.38
PHF3-201ENST00000262043 PRR26Q8N8Z3 221 aa6.4□□□□□ -1.39
PHF3-201ENST00000262043 Q1T7F1 81 aa6.4□□□□□ -1.39
PHF3-201ENST00000262043 GCN1Q92616 2671 aaKnown RBP6.39□□□□□ -1.39
PHF3-201ENST00000262043 SPTBN5Q9NRC6 3674 aaKnown RBP6.39□□□□□ -1.39
PHF3-201ENST00000262043 USP34Q70CQ2 3546 aa6.39□□□□□ -1.39
PHF3-201ENST00000262043 NBEAL1Q6ZS30 2694 aa6.39□□□□□ -1.39
PHF3-201ENST00000262043 Q6ZSA8 131 aa6.39□□□□□ -1.39
PHF3-201ENST00000262043 LRBAP50851 2863 aa6.37□□□□□ -1.39
PHF3-201ENST00000262043 IGLV7-46A0A075B6I9 117 aa6.36□□□□□ -1.39
PHF3-201ENST00000262043 HRES1P13985 223 aa6.35□□□□□ -1.39
PHF3-201ENST00000262043 FAM229BQ4G0N7 80 aa6.33□□□□□ -1.4
PHF3-201ENST00000262043 SPEGQ15772 3267 aa6.33□□□□□ -1.4
PHF3-201ENST00000262043 Q8NDZ9 215 aa6.33□□□□□ -1.4
PHF3-201ENST00000262043 A0A1B0GU33 70 aa6.33□□□□□ -1.4
PHF3-201ENST00000262043 FRYLO94915 3013 aa6.32□□□□□ -1.4
PHF3-201ENST00000262043 UNC79Q9P2D8 2635 aa6.31□□□□□ -1.4
PHF3-201ENST00000262043 LUZP6Q538Z0 58 aa6.31□□□□□ -1.4
PHF3-201ENST00000262043 BOD1L1Q8NFC6 3051 aa6.3□□□□□ -1.4
PHF3-201ENST00000262043 ZNF292O60281 2723 aa6.3□□□□□ -1.4
PHF3-201ENST00000262043 M0R2T5 61 aa6.3□□□□□ -1.4
PHF3-201ENST00000262043 COL6A5A8TX70 2615 aa6.3□□□□□ -1.4
PHF3-201ENST00000262043 Q75L30 129 aa6.3□□□□□ -1.4
PHF3-201ENST00000262043 PLAC8Q9NZF1 115 aa6.29□□□□□ -1.4
PHF3-201ENST00000262043 CAMK2N1Q7Z7J9 78 aa6.29□□□□□ -1.4
PHF3-201ENST00000262043 KMT2BQ9UMN6 2715 aaPredicted RBP6.29□□□□□ -1.4
PHF3-201ENST00000262043 ITPR2Q14571 2701 aa6.29□□□□□ -1.4
PHF3-201ENST00000262043 MMP24-AS1A0A0U1RRL7 71 aa6.28□□□□□ -1.4
PHF3-201ENST00000262043 TEP1Q99973 2627 aaKnown RBP6.28□□□□□ -1.4
PHF3-201ENST00000262043 CFAP47Q6ZTR5 3102 aa6.28□□□□□ -1.4
PHF3-201ENST00000262043 NBEAL2Q6ZNJ1 2754 aa6.28□□□□□ -1.4
PHF3-201ENST00000262043 S4R3F8 94 aa6.28□□□□□ -1.4
PHF3-201ENST00000262043 WIPF1O43516 503 aa6.27□□□□□ -1.41
PHF3-201ENST00000262043 ZCCHC13Q8WW36 166 aaKnown RBP6.27□□□□□ -1.41
PHF3-201ENST00000262043 MYO15AQ9UKN7 3530 aa6.26□□□□□ -1.41
PHF3-201ENST00000262043 SPRR1AP35321 89 aa6.26□□□□□ -1.41
PHF3-201ENST00000262043 Q8N9P0 234 aaPredicted RBP6.26□□□□□ -1.41
PHF3-201ENST00000262043 CYSTM1Q9H1C7 97 aa6.25□□□□□ -1.41
PHF3-201ENST00000262043 STAB1Q9NY15 2570 aa6.24□□□□□ -1.41
PHF3-201ENST00000262043 WDFY3Q8IZQ1 3526 aa6.23□□□□□ -1.41
PHF3-201ENST00000262043 Q5W150 140 aa6.23□□□□□ -1.41
PHF3-201ENST00000262043 LINC00483Q53H64 154 aa6.22□□□□□ -1.41
PHF3-201ENST00000262043 LINC00472Q9H8W2 130 aa6.22□□□□□ -1.41
PHF3-201ENST00000262043 APCP25054 2843 aa6.21□□□□□ -1.41
PHF3-201ENST00000262043 SETXQ7Z333 2677 aaKnown RBP6.21□□□□□ -1.42
PHF3-201ENST00000262043 DMAC1Q96GE9 116 aa6.21□□□□□ -1.42
PHF3-201ENST00000262043 EYSQ5T1H1 3165 aa6.2□□□□□ -1.42
PHF3-201ENST00000262043 Q5XG85 94 aa6.2□□□□□ -1.42
PHF3-201ENST00000262043 NBEAQ8NFP9 2946 aa6.2□□□□□ -1.42
PHF3-201ENST00000262043 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
PHF3-201ENST00000262043 NOTCH1P46531 2555 aa6.2□□□□□ -1.42
PHF3-201ENST00000262043 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
PHF3-201ENST00000262043 KRTAP1-5Q9BYS1 174 aa6.19□□□□□ -1.42
PHF3-201ENST00000262043 ASH1LQ9NR48 2969 aaKnown RBP6.19□□□□□ -1.42
PHF3-201ENST00000262043 FP248Q71RG6 208 aaPredicted RBP6.18□□□□□ -1.42
PHF3-201ENST00000262043 DMXL2Q8TDJ6 3036 aa6.18□□□□□ -1.42
PHF3-201ENST00000262043 SPINK7P58062 85 aa6.17□□□□□ -1.42
PHF3-201ENST00000262043 ADGRG4Q8IZF6 3080 aa6.17□□□□□ -1.42
PHF3-201ENST00000262043 Q5VV11 94 aa6.16□□□□□ -1.42
PHF3-201ENST00000262043 DMBT1Q9UGM3 2413 aaPredicted RBP6.16□□□□□ -1.42
PHF3-201ENST00000262043 TACC2O95359 2948 aa6.16□□□□□ -1.42
PHF3-201ENST00000262043 SPRR1BP22528 89 aa6.15□□□□□ -1.43
PHF3-201ENST00000262043 KRTAP26-1Q6PEX3 210 aa6.14□□□□□ -1.43
PHF3-201ENST00000262043 CRYBG3Q68DQ2 2970 aa6.14□□□□□ -1.43
PHF3-201ENST00000262043 PRAC1Q96KF2 57 aa6.14□□□□□ -1.43
PHF3-201ENST00000262043 Q5VSD8 79 aa6.13□□□□□ -1.43
PHF3-201ENST00000262043 R4GN34 69 aa6.13□□□□□ -1.43
PHF3-201ENST00000262043 UTP20O75691 2785 aaKnown RBP6.12□□□□□ -1.43
PHF3-201ENST00000262043 KRTAP10-2P60368 255 aa6.11□□□□□ -1.43
PHF3-201ENST00000262043 KRTAP10-1P60331 282 aa6.11□□□□□ -1.43
PHF3-201ENST00000262043 IGSF10Q6WRI0 2623 aa6.11□□□□□ -1.43
PHF3-201ENST00000262043 STAB2Q8WWQ8 2551 aa6.1□□□□□ -1.43
PHF3-201ENST00000262043 SEC61BP60468 96 aaKnown RBP6.08□□□□□ -1.44
PHF3-201ENST00000262043 ATMQ13315 3056 aa6.07□□□□□ -1.44
PHF3-201ENST00000262043 ASPMQ8IZT6 3477 aa6.07□□□□□ -1.44
PHF3-201ENST00000262043 BAHCC1Q9P281 2608 aa6.07□□□□□ -1.44
PHF3-201ENST00000262043 COL12A1Q99715 3063 aa6.07□□□□□ -1.44
PHF3-201ENST00000262043 ITPR1Q14643 2758 aa6.06□□□□□ -1.44
PHF3-201ENST00000262043 PANO1I0J062 215 aa6.04□□□□□ -1.44
PHF3-201ENST00000262043 UBR5O95071 2799 aaPredicted RBP6.04□□□□□ -1.44
PHF3-201ENST00000262043 ZZEF1O43149 2961 aa6.03□□□□□ -1.44
PHF3-201ENST00000262043 OXTP01178 125 aa6.03□□□□□ -1.44
PHF3-201ENST00000262043 KRTAP4-16G5E9R7 235 aaPredicted RBP6.03□□□□□ -1.44
PHF3-201ENST00000262043 H1FX-AS1Q4G0G2 97 aa6.03□□□□□ -1.44
PHF3-201ENST00000262043 ROMO1P60602 79 aa6.02□□□□□ -1.45
PHF3-201ENST00000262043 RPL37P61927 97 aaKnown RBP6.02□□□□□ -1.45
PHF3-201ENST00000262043 Q6ZR54 194 aa6.02□□□□□ -1.45
PHF3-201ENST00000262043 LOC400499M0QZD8 3231 aa6.02□□□□□ -1.45
PHF3-201ENST00000262043 NSD1Q96L73 2696 aaPredicted RBP6.01□□□□□ -1.45
PHF3-201ENST00000262043 M0QZ58 72 aa6.01□□□□□ -1.45
PHF3-201ENST00000262043 LCE6AA0A183 80 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms