RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 PANO1I0J062 215 aa11.01□□□□□ -0.65
SSB-201ENST00000260956 LRP1BQ9NZR2 4599 aa11.01□□□□□ -0.65
SSB-201ENST00000260956 A0A087WTM6 91 aa11.01□□□□□ -0.65
SSB-201ENST00000260956 UBE2BP63146 152 aa11□□□□□ -0.65
SSB-201ENST00000260956 A0A1W2PNM2 257 aa10.99□□□□□ -0.65
SSB-201ENST00000260956 PHF5AQ7RTV0 110 aaKnown RBP10.99□□□□□ -0.65
SSB-201ENST00000260956 PKIGQ9Y2B9 76 aa10.99□□□□□ -0.65
SSB-201ENST00000260956 UQCRQO14949 82 aa10.98□□□□□ -0.65
SSB-201ENST00000260956 COX7CP15954 63 aa10.98□□□□□ -0.65
SSB-201ENST00000260956 PRLHP81277 87 aa10.98□□□□□ -0.65
SSB-201ENST00000260956 H0Y9J4 135 aa10.97□□□□□ -0.65
SSB-201ENST00000260956 A0A1B0GW54 56 aa10.95□□□□□ -0.66
SSB-201ENST00000260956 HAMPP81172 84 aa10.95□□□□□ -0.66
SSB-201ENST00000260956 LCE2DQ5TA82 110 aaPredicted RBP10.95□□□□□ -0.66
SSB-201ENST00000260956 Q8NBF4 154 aa10.95□□□□□ -0.66
SSB-201ENST00000260956 C1orf137Q5JT78 98 aa10.94□□□□□ -0.66
SSB-201ENST00000260956 SPACA4Q8TDM5 124 aa10.94□□□□□ -0.66
SSB-201ENST00000260956 SPRR4Q96PI1 79 aa10.94□□□□□ -0.66
SSB-201ENST00000260956 IGLV8-61A0A075B6I0 122 aa10.93□□□□□ -0.66
SSB-201ENST00000260956 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
SSB-201ENST00000260956 SERP2Q8N6R1 65 aa10.93□□□□□ -0.66
SSB-201ENST00000260956 LINC00474Q9P2X8 69 aa10.93□□□□□ -0.66
SSB-201ENST00000260956 SPRR1BP22528 89 aa10.92□□□□□ -0.66
SSB-201ENST00000260956 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
SSB-201ENST00000260956 SCXQ7RTU7 201 aa10.9□□□□□ -0.66
SSB-201ENST00000260956 BCE1O60756 84 aa10.89□□□□□ -0.67
SSB-201ENST00000260956 CRYGAP11844 174 aa10.89□□□□□ -0.67
SSB-201ENST00000260956 APOBP04114 4563 aaKnown RBP10.89□□□□□ -0.67
SSB-201ENST00000260956 RYR1P21817 5038 aa10.89□□□□□ -0.67
SSB-201ENST00000260956 C9orf153Q5TBE3 101 aa10.87□□□□□ -0.67
SSB-201ENST00000260956 HIGD2AQ9BW72 106 aa10.87□□□□□ -0.67
SSB-201ENST00000260956 IGKV4-1P06312 121 aa10.87□□□□□ -0.67
SSB-201ENST00000260956 CYSTM1Q9H1C7 97 aa10.86□□□□□ -0.67
SSB-201ENST00000260956 HSPG2P98160 4391 aa10.86□□□□□ -0.67
SSB-201ENST00000260956 HERC2O95714 4834 aa10.86□□□□□ -0.67
SSB-201ENST00000260956 NREPQ16612 68 aa10.85□□□□□ -0.67
SSB-201ENST00000260956 IGFL1Q6UW32 110 aa10.85□□□□□ -0.67
SSB-201ENST00000260956 SS18L2Q9UHA2 77 aa10.85□□□□□ -0.67
SSB-201ENST00000260956 KRTAP10-1P60331 282 aa10.84□□□□□ -0.67
SSB-201ENST00000260956 Q8N9L7 120 aa10.81□□□□□ -0.68
SSB-201ENST00000260956 IGLV5-52A0A0A0MRZ9 124 aa10.81□□□□□ -0.68
SSB-201ENST00000260956 A0A0G2JQZ4 141 aa10.81□□□□□ -0.68
SSB-201ENST00000260956 KRTAP17-1Q9BYP8 105 aa10.81□□□□□ -0.68
SSB-201ENST00000260956 F8WEM9 126 aa10.8□□□□□ -0.68
SSB-201ENST00000260956 BPY2O14599 106 aa10.79□□□□□ -0.68
SSB-201ENST00000260956 PLAC8Q9NZF1 115 aa10.79□□□□□ -0.68
SSB-201ENST00000260956 TRAV7A0A075B6U4 112 aa10.78□□□□□ -0.68
SSB-201ENST00000260956 DNAH8Q96JB1 4490 aa10.78□□□□□ -0.68
SSB-201ENST00000260956 UBE2AP49459 152 aa10.78□□□□□ -0.68
SSB-201ENST00000260956 SRRM2Q9UQ35 2752 aaKnown RBP10.78□□□□□ -0.68
SSB-201ENST00000260956 FAM30AQ9NZY2 134 aa10.76□□□□□ -0.69
SSB-201ENST00000260956 DSCR10P59022 87 aa10.75□□□□□ -0.69
SSB-201ENST00000260956 SMIM20Q8N5G0 67 aa10.75□□□□□ -0.69
SSB-201ENST00000260956 FAT1Q14517 4588 aa10.74□□□□□ -0.69
SSB-201ENST00000260956 LINC00483Q53H64 154 aa10.72□□□□□ -0.69
SSB-201ENST00000260956 CDK2AP2O75956 126 aa10.71□□□□□ -0.69
SSB-201ENST00000260956 PSORS1C2Q9UIG4 136 aa10.7□□□□□ -0.7
SSB-201ENST00000260956 PCLOQ9Y6V0 5065 aa10.69□□□□□ -0.7
SSB-201ENST00000260956 Q6ZSA8 131 aa10.69□□□□□ -0.7
SSB-201ENST00000260956 OCR1Q9BZK8 76 aa10.69□□□□□ -0.7
SSB-201ENST00000260956 DPH3Q96FX2 82 aa10.68□□□□□ -0.7
SSB-201ENST00000260956 A0A087WSZ3 146 aa10.67□□□□□ -0.7
SSB-201ENST00000260956 ABCA13Q86UQ4 5058 aa10.67□□□□□ -0.7
SSB-201ENST00000260956 K7EQZ3 153 aa10.66□□□□□ -0.7
SSB-201ENST00000260956 KLKP1Q107X0 134 aa10.65□□□□□ -0.7
SSB-201ENST00000260956 C20orf197Q8N268 126 aa10.65□□□□□ -0.7
SSB-201ENST00000260956 KRTAP3-3Q9BYR6 98 aa10.65□□□□□ -0.7
SSB-201ENST00000260956 KRTAP3-2Q9BYR7 98 aa10.65□□□□□ -0.7
SSB-201ENST00000260956 KRTAP4-5Q9BYR2 181 aa10.64□□□□□ -0.71
SSB-201ENST00000260956 TMEM258P61165 79 aa10.64□□□□□ -0.71
SSB-201ENST00000260956 ZNF861PO60384 105 aa10.61□□□□□ -0.71
SSB-201ENST00000260956 LINC00472Q9H8W2 130 aa10.61□□□□□ -0.71
SSB-201ENST00000260956 SMR3BP02814 79 aaPredicted RBP10.6□□□□□ -0.71
SSB-201ENST00000260956 H7BZZ5 65 aa10.59□□□□□ -0.71
SSB-201ENST00000260956 RPL37AP61513 92 aaKnown RBP10.58□□□□□ -0.72
SSB-201ENST00000260956 CIRBP-AS1Q8TBR5 109 aa10.58□□□□□ -0.72
SSB-201ENST00000260956 ZNF706Q9Y5V0 76 aaPredicted RBP10.58□□□□□ -0.72
SSB-201ENST00000260956 VPS13BQ7Z7G8 4022 aa10.56□□□□□ -0.72
SSB-201ENST00000260956 DEFB116Q30KQ4 102 aa10.55□□□□□ -0.72
SSB-201ENST00000260956 Q8N1X5 172 aa10.55□□□□□ -0.72
SSB-201ENST00000260956 A0A0U1RQV1 116 aa10.53□□□□□ -0.72
SSB-201ENST00000260956 HCG22E2RYF7 251 aa10.53□□□□□ -0.72
SSB-201ENST00000260956 IGLV7-43P04211 117 aa10.53□□□□□ -0.72
SSB-201ENST00000260956 Q96NJ1 140 aa10.53□□□□□ -0.72
SSB-201ENST00000260956 SNURFQ9Y675 71 aa10.53□□□□□ -0.72
SSB-201ENST00000260956 KRTAP29-1A8MX34 341 aaPredicted RBP10.53□□□□□ -0.72
SSB-201ENST00000260956 TMEM254Q8TBM7 123 aa10.53□□□□□ -0.72
SSB-201ENST00000260956 IGLV9-49A0A0B4J1Y8 123 aa10.52□□□□□ -0.73
SSB-201ENST00000260956 PRR15Q8IV56 129 aa10.5□□□□□ -0.73
SSB-201ENST00000260956 A8MWP4 228 aa10.49□□□□□ -0.73
SSB-201ENST00000260956 RPS28P62857 69 aaKnown RBP10.49□□□□□ -0.73
SSB-201ENST00000260956 MOBPQ13875 183 aa10.48□□□□□ -0.73
SSB-201ENST00000260956 ANAPC11Q9NYG5 84 aa10.48□□□□□ -0.73
SSB-201ENST00000260956 Q5VSD8 79 aa10.47□□□□□ -0.73
SSB-201ENST00000260956 OXTP01178 125 aa10.46□□□□□ -0.74
SSB-201ENST00000260956 NDUFC1O43677 76 aa10.45□□□□□ -0.74
SSB-201ENST00000260956 MYCBP2O75592 4640 aa10.45□□□□□ -0.74
SSB-201ENST00000260956 J3KT08 172 aa10.44□□□□□ -0.74
SSB-201ENST00000260956 KRTAP10-4P60372 401 aaPredicted RBP10.44□□□□□ -0.74
SSB-201ENST00000260956 ZCCHC13Q8WW36 166 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms