RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 SNCGO76070 127 aa11.87□□□□□ -0.51
SNRPA-201ENST00000243563 DNAL4O96015 105 aa11.87□□□□□ -0.51
SNRPA-201ENST00000243563 H3BMG7 143 aa11.86□□□□□ -0.51
SNRPA-201ENST00000243563 MT1HL1P0DM35 61 aa11.86□□□□□ -0.51
SNRPA-201ENST00000243563 IGLV9-49A0A0B4J1Y8 123 aa11.86□□□□□ -0.51
SNRPA-201ENST00000243563 CRYGAP11844 174 aa11.85□□□□□ -0.51
SNRPA-201ENST00000243563 MTURNQ8N3F0 131 aa11.85□□□□□ -0.51
SNRPA-201ENST00000243563 ORMDL1Q9P0S3 153 aa11.85□□□□□ -0.51
SNRPA-201ENST00000243563 KRTAP10-8P60410 259 aa11.83□□□□□ -0.52
SNRPA-201ENST00000243563 K7EP34 96 aa11.82□□□□□ -0.52
SNRPA-201ENST00000243563 OCIAD2Q56VL3 154 aa11.82□□□□□ -0.52
SNRPA-201ENST00000243563 C9JAW5 83 aa11.82□□□□□ -0.52
SNRPA-201ENST00000243563 MOBPQ13875 183 aa11.82□□□□□ -0.52
SNRPA-201ENST00000243563 KRTAP29-1A8MX34 341 aaPredicted RBP11.81□□□□□ -0.52
SNRPA-201ENST00000243563 OXTP01178 125 aa11.81□□□□□ -0.52
SNRPA-201ENST00000243563 LAMTOR3Q9UHA4 124 aa11.8□□□□□ -0.52
SNRPA-201ENST00000243563 A0A0G2JQZ4 141 aa11.79□□□□□ -0.52
SNRPA-201ENST00000243563 BAALC-AS2P0C853 105 aa11.79□□□□□ -0.52
SNRPA-201ENST00000243563 PPDPFLQ8WWR9 84 aa11.79□□□□□ -0.52
SNRPA-201ENST00000243563 C9orf153Q5TBE3 101 aa11.78□□□□□ -0.52
SNRPA-201ENST00000243563 A0A1B0GV90 55 aa11.78□□□□□ -0.52
SNRPA-201ENST00000243563 TYMSOSQ8TAI1 123 aa11.78□□□□□ -0.52
SNRPA-201ENST00000243563 A0A1B0GV72 72 aa11.77□□□□□ -0.53
SNRPA-201ENST00000243563 NDUFV3P56181 108 aaKnown RBP11.77□□□□□ -0.53
SNRPA-201ENST00000243563 TMEM256-PLSCR3K7ERE1 68 aa11.75□□□□□ -0.53
SNRPA-201ENST00000243563 SMCPP49901 116 aaPredicted RBP11.75□□□□□ -0.53
SNRPA-201ENST00000243563 PRO0461Q9UI25 63 aa11.75□□□□□ -0.53
SNRPA-201ENST00000243563 Q8NBF4 154 aa11.74□□□□□ -0.53
SNRPA-201ENST00000243563 UBE2V1Q13404 147 aa11.71□□□□□ -0.53
SNRPA-201ENST00000243563 IGLV8-61A0A075B6I0 122 aa11.71□□□□□ -0.54
SNRPA-201ENST00000243563 F8WEM9 126 aa11.7□□□□□ -0.54
SNRPA-201ENST00000243563 GTF2H5Q6ZYL4 71 aa11.7□□□□□ -0.54
SNRPA-201ENST00000243563 ANKRD29Q8N6D5 301 aa11.7□□□□□ -0.54
SNRPA-201ENST00000243563 H3BQ85 93 aa11.69□□□□□ -0.54
SNRPA-201ENST00000243563 GHRHP01286 108 aa11.69□□□□□ -0.54
SNRPA-201ENST00000243563 IGFL1Q6UW32 110 aa11.68□□□□□ -0.54
SNRPA-201ENST00000243563 SSBP3-AS1Q7Z2R9 100 aa11.68□□□□□ -0.54
SNRPA-201ENST00000243563 H3BT86 120 aa11.68□□□□□ -0.54
SNRPA-201ENST00000243563 J3QL48 77 aa11.66□□□□□ -0.54
SNRPA-201ENST00000243563 LINC00304Q8N9R0 145 aa11.65□□□□□ -0.54
SNRPA-201ENST00000243563 HRCT1Q6UXD1 115 aa11.64□□□□□ -0.55
SNRPA-201ENST00000243563 Q6JHZ5 121 aa11.6□□□□□ -0.55
SNRPA-201ENST00000243563 OBSCN-AS1Q96MR7 158 aa11.6□□□□□ -0.55
SNRPA-201ENST00000243563 DMBT1Q9UGM3 2413 aaPredicted RBP11.6□□□□□ -0.55
SNRPA-201ENST00000243563 TRBV7-4A0A0J9YYF1 115 aa11.59□□□□□ -0.55
SNRPA-201ENST00000243563 RBM3P98179 157 aaKnown RBP11.58□□□□□ -0.56
SNRPA-201ENST00000243563 A0A1W2PNM2 257 aa11.57□□□□□ -0.56
SNRPA-201ENST00000243563 C14orf132Q9NPU4 83 aa11.57□□□□□ -0.56
SNRPA-201ENST00000243563 F8W1H4 67 aa11.56□□□□□ -0.56
SNRPA-201ENST00000243563 JMJD7-PLA2G4BH0Y9G9 81 aa11.54□□□□□ -0.56
SNRPA-201ENST00000243563 C4orf48Q5BLP8 95 aa11.53□□□□□ -0.56
SNRPA-201ENST00000243563 CD164Q04900 197 aa11.52□□□□□ -0.57
SNRPA-201ENST00000243563 SPAG11AQ6PDA7 123 aa11.52□□□□□ -0.57
SNRPA-201ENST00000243563 DSCR8Q96T75 97 aa11.52□□□□□ -0.57
SNRPA-201ENST00000243563 Q6ZQT0 140 aa11.51□□□□□ -0.57
SNRPA-201ENST00000243563 SPINK1P00995 79 aa11.5□□□□□ -0.57
SNRPA-201ENST00000243563 ETDBQ3ZM63 59 aa11.5□□□□□ -0.57
SNRPA-201ENST00000243563 HERC1Q15751 4861 aa11.5□□□□□ -0.57
SNRPA-201ENST00000243563 LOC110117498A0A087WWA1 95 aa11.49□□□□□ -0.57
SNRPA-201ENST00000243563 TRBV7-7A0A0K0K1E9 115 aa11.49□□□□□ -0.57
SNRPA-201ENST00000243563 CCKP06307 115 aa11.49□□□□□ -0.57
SNRPA-201ENST00000243563 Q6Q795 121 aa11.49□□□□□ -0.57
SNRPA-201ENST00000243563 TEN1Q86WV5 123 aa11.49□□□□□ -0.57
SNRPA-201ENST00000243563 VPS25Q9BRG1 176 aa11.48□□□□□ -0.57
SNRPA-201ENST00000243563 RETNLBQ9BQ08 111 aa11.46□□□□□ -0.57
SNRPA-201ENST00000243563 RPS29P62273 56 aaKnown RBP11.45□□□□□ -0.58
SNRPA-201ENST00000243563 A0A087WSZ3 146 aa11.44□□□□□ -0.58
SNRPA-201ENST00000243563 Q5XG85 94 aa11.39□□□□□ -0.59
SNRPA-201ENST00000243563 PDE6GP18545 87 aa11.38□□□□□ -0.59
SNRPA-201ENST00000243563 LIMD2Q9BT23 127 aa11.38□□□□□ -0.59
SNRPA-201ENST00000243563 C1orf195Q5TG92 126 aa11.35□□□□□ -0.59
SNRPA-201ENST00000243563 Q96NJ1 140 aa11.33□□□□□ -0.6
SNRPA-201ENST00000243563 ASB16-AS1Q495Z4 193 aa11.32□□□□□ -0.6
SNRPA-201ENST00000243563 SS18L2Q9UHA2 77 aa11.29□□□□□ -0.6
SNRPA-201ENST00000243563 HMCN2Q8NDA2 5059 aa11.28□□□□□ -0.6
SNRPA-201ENST00000243563 PRR4Q16378 134 aa11.27□□□□□ -0.6
SNRPA-201ENST00000243563 DEFB116Q30KQ4 102 aa11.27□□□□□ -0.61
SNRPA-201ENST00000243563 LINC00472Q9H8W2 130 aa11.26□□□□□ -0.61
SNRPA-201ENST00000243563 A0A1B0GW54 56 aa11.24□□□□□ -0.61
SNRPA-201ENST00000243563 C21orf62-AS1Q17RA5 79 aa11.24□□□□□ -0.61
SNRPA-201ENST00000243563 LINC00846Q9NV44 126 aa11.24□□□□□ -0.61
SNRPA-201ENST00000243563 LPAP08519 4548 aa11.24□□□□□ -0.61
SNRPA-201ENST00000243563 IGLV7-46A0A075B6I9 117 aa11.21□□□□□ -0.61
SNRPA-201ENST00000243563 FP248Q71RG6 208 aaPredicted RBP11.2□□□□□ -0.62
SNRPA-201ENST00000243563 Q6ZVQ6 151 aa11.17□□□□□ -0.62
SNRPA-201ENST00000243563 IGKV4-1P06312 121 aa11.17□□□□□ -0.62
SNRPA-201ENST00000243563 NREPQ16612 68 aa11.17□□□□□ -0.62
SNRPA-201ENST00000243563 SIGMAR1Q99720 223 aa11.14□□□□□ -0.63
SNRPA-201ENST00000243563 KRTAP13-3Q3SY46 172 aa11.13□□□□□ -0.63
SNRPA-201ENST00000243563 FAM240AA0A1B0GVK7 77 aa11.1□□□□□ -0.63
SNRPA-201ENST00000243563 C9orf92A6NGG3 77 aa11.09□□□□□ -0.63
SNRPA-201ENST00000243563 DSCR10P59022 87 aa11.08□□□□□ -0.64
SNRPA-201ENST00000243563 TPRXLQ17RH7 258 aa11.08□□□□□ -0.64
SNRPA-201ENST00000243563 UBL5Q9BZL1 73 aa11.08□□□□□ -0.64
SNRPA-201ENST00000243563 LRP2P98164 4655 aa11.07□□□□□ -0.64
SNRPA-201ENST00000243563 ACYP1P07311 99 aa11.07□□□□□ -0.64
SNRPA-201ENST00000243563 NOTCH2NLQ7Z3S9 236 aa11.06□□□□□ -0.64
SNRPA-201ENST00000243563 J3KT08 172 aa11.05□□□□□ -0.64
SNRPA-201ENST00000243563 IGKV3D-7A0A0C4DH55 119 aa11.04□□□□□ -0.64
SNRPA-201ENST00000243563 BPY2O14599 106 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms