RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 SPRR1BP22528 89 aa9.28□□□□□ -0.92
HDHD3-201ENST00000238379 ZNF861PO60384 105 aa9.27□□□□□ -0.93
HDHD3-201ENST00000238379 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
HDHD3-201ENST00000238379 XGP55808 180 aa9.26□□□□□ -0.93
HDHD3-201ENST00000238379 LINC00846Q9NV44 126 aa9.25□□□□□ -0.93
HDHD3-201ENST00000238379 PKHD1P08F94 4074 aa9.24□□□□□ -0.93
HDHD3-201ENST00000238379 SPRR4Q96PI1 79 aa9.23□□□□□ -0.93
HDHD3-201ENST00000238379 SIGMAR1Q99720 223 aa9.23□□□□□ -0.93
HDHD3-201ENST00000238379 F8WEM9 126 aa9.21□□□□□ -0.93
HDHD3-201ENST00000238379 IGLV8-61A0A075B6I0 122 aa9.21□□□□□ -0.94
HDHD3-201ENST00000238379 MT-ATP8P03928 68 aa9.21□□□□□ -0.94
HDHD3-201ENST00000238379 LRP1BQ9NZR2 4599 aa9.2□□□□□ -0.94
HDHD3-201ENST00000238379 LINC00483Q53H64 154 aa9.2□□□□□ -0.94
HDHD3-201ENST00000238379 ZNF706Q9Y5V0 76 aaPredicted RBP9.19□□□□□ -0.94
HDHD3-201ENST00000238379 LINC00643Q86TS7 51 aa9.18□□□□□ -0.94
HDHD3-201ENST00000238379 A0A1W2PNM2 257 aa9.17□□□□□ -0.94
HDHD3-201ENST00000238379 IGFL1Q6UW32 110 aa9.17□□□□□ -0.94
HDHD3-201ENST00000238379 DYNC1H1Q14204 4646 aaKnown RBP9.15□□□□□ -0.94
HDHD3-201ENST00000238379 A0A0G2JQZ4 141 aa9.15□□□□□ -0.94
HDHD3-201ENST00000238379 Q8NBF4 154 aa9.15□□□□□ -0.94
HDHD3-201ENST00000238379 UBL5Q9BZL1 73 aa9.14□□□□□ -0.95
HDHD3-201ENST00000238379 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
HDHD3-201ENST00000238379 A0A1B0GW54 56 aa9.12□□□□□ -0.95
HDHD3-201ENST00000238379 Q6JHZ5 121 aa9.12□□□□□ -0.95
HDHD3-201ENST00000238379 Q6ZVQ6 151 aa9.12□□□□□ -0.95
HDHD3-201ENST00000238379 IGLV9-49A0A0B4J1Y8 123 aa9.1□□□□□ -0.95
HDHD3-201ENST00000238379 CRYGAP11844 174 aa9.1□□□□□ -0.95
HDHD3-201ENST00000238379 RYR3Q15413 4870 aa9.1□□□□□ -0.95
HDHD3-201ENST00000238379 TRBV7-7A0A0K0K1E9 115 aa9.09□□□□□ -0.95
HDHD3-201ENST00000238379 SMR3BP02814 79 aaPredicted RBP9.08□□□□□ -0.96
HDHD3-201ENST00000238379 J3QL48 77 aa9.08□□□□□ -0.96
HDHD3-201ENST00000238379 RPL37AP61513 92 aaKnown RBP9.08□□□□□ -0.96
HDHD3-201ENST00000238379 IGKV3D-7A0A0C4DH55 119 aa9.07□□□□□ -0.96
HDHD3-201ENST00000238379 C9orf153Q5TBE3 101 aa9.07□□□□□ -0.96
HDHD3-201ENST00000238379 MOBPQ13875 183 aa9.05□□□□□ -0.96
HDHD3-201ENST00000238379 Q6Q795 121 aa9.05□□□□□ -0.96
HDHD3-201ENST00000238379 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
HDHD3-201ENST00000238379 NREPQ16612 68 aa9.05□□□□□ -0.96
HDHD3-201ENST00000238379 ATP5EP2Q5VTU8 51 aa9.05□□□□□ -0.96
HDHD3-201ENST00000238379 APOBP04114 4563 aaKnown RBP9.04□□□□□ -0.96
HDHD3-201ENST00000238379 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
HDHD3-201ENST00000238379 KRTAP1-4P0C5Y4 121 aa9.02□□□□□ -0.97
HDHD3-201ENST00000238379 SCGB1A1P11684 91 aa9.02□□□□□ -0.97
HDHD3-201ENST00000238379 A0A087WSZ3 146 aa9.01□□□□□ -0.97
HDHD3-201ENST00000238379 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
HDHD3-201ENST00000238379 SPINK6Q6UWN8 80 aa9.01□□□□□ -0.97
HDHD3-201ENST00000238379 CXCL6P80162 114 aa9□□□□□ -0.97
HDHD3-201ENST00000238379 FAM229BQ4G0N7 80 aa9□□□□□ -0.97
HDHD3-201ENST00000238379 A0A087X002 238 aa8.99□□□□□ -0.97
HDHD3-201ENST00000238379 KRTAP13-2Q52LG2 175 aa8.97□□□□□ -0.97
HDHD3-201ENST00000238379 SSBP3-AS1Q7Z2R9 100 aa8.97□□□□□ -0.97
HDHD3-201ENST00000238379 BPY2O14599 106 aa8.96□□□□□ -0.98
HDHD3-201ENST00000238379 CDK2AP2O75956 126 aa8.95□□□□□ -0.98
HDHD3-201ENST00000238379 HIST1H4AP62805 103 aaKnown RBP8.95□□□□□ -0.98
HDHD3-201ENST00000238379 HRCT1Q6UXD1 115 aa8.95□□□□□ -0.98
HDHD3-201ENST00000238379 A0A087WVE0 104 aa8.94□□□□□ -0.98
HDHD3-201ENST00000238379 FAT1Q14517 4588 aa8.94□□□□□ -0.98
HDHD3-201ENST00000238379 PLA2G1BP04054 148 aaKnown RBP8.94□□□□□ -0.98
HDHD3-201ENST00000238379 FAM236AA0A1B0GUQ0 79 aa8.91□□□□□ -0.98
HDHD3-201ENST00000238379 FAM236BA0A1B0GV22 79 aa8.91□□□□□ -0.98
HDHD3-201ENST00000238379 DSCR10P59022 87 aa8.9□□□□□ -0.98
HDHD3-201ENST00000238379 CD164Q04900 197 aa8.9□□□□□ -0.98
HDHD3-201ENST00000238379 Q8N9L7 120 aa8.9□□□□□ -0.98
HDHD3-201ENST00000238379 LINC00472Q9H8W2 130 aa8.9□□□□□ -0.98
HDHD3-201ENST00000238379 PCP4P48539 62 aa8.89□□□□□ -0.99
HDHD3-201ENST00000238379 DEFB116Q30KQ4 102 aa8.89□□□□□ -0.99
HDHD3-201ENST00000238379 FAM229AH3BQW9 127 aa8.89□□□□□ -0.99
HDHD3-201ENST00000238379 IGKV4-1P06312 121 aa8.88□□□□□ -0.99
HDHD3-201ENST00000238379 SS18L2Q9UHA2 77 aa8.87□□□□□ -0.99
HDHD3-201ENST00000238379 Q96NJ1 140 aa8.85□□□□□ -0.99
HDHD3-201ENST00000238379 KRTAP3-3Q9BYR6 98 aa8.85□□□□□ -0.99
HDHD3-201ENST00000238379 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
HDHD3-201ENST00000238379 PRR26Q8N8Z3 221 aa8.84□□□□□ -0.99
HDHD3-201ENST00000238379 TYMSOSQ8TAI1 123 aa8.84□□□□□ -0.99
HDHD3-201ENST00000238379 K7EQZ3 153 aa8.84□□□□□ -0.99
HDHD3-201ENST00000238379 Q5VSD8 79 aa8.83□□□□□ -1
HDHD3-201ENST00000238379 HSPG2P98160 4391 aa8.83□□□□□ -1
HDHD3-201ENST00000238379 KRTAP17-1Q9BYP8 105 aa8.82□□□□□ -1
HDHD3-201ENST00000238379 J3KT08 172 aa8.81□□□□□ -1
HDHD3-201ENST00000238379 ANAPC13Q9BS18 74 aa8.8□□□□□ -1
HDHD3-201ENST00000238379 RYR1P21817 5038 aa8.79□□□□□ -1
HDHD3-201ENST00000238379 A8MWP4 228 aa8.79□□□□□ -1
HDHD3-201ENST00000238379 Q5XG85 94 aa8.79□□□□□ -1
HDHD3-201ENST00000238379 EPPK1P58107 5090 aaKnown RBP8.78□□□□□ -1
HDHD3-201ENST00000238379 ASB16-AS1Q495Z4 193 aa8.78□□□□□ -1
HDHD3-201ENST00000238379 KIAA1109Q2LD37 5005 aa8.78□□□□□ -1
HDHD3-201ENST00000238379 ATOX1O00244 68 aa8.77□□□□□ -1
HDHD3-201ENST00000238379 PRR15Q8IV56 129 aa8.77□□□□□ -1.01
HDHD3-201ENST00000238379 SPINK1P00995 79 aa8.75□□□□□ -1.01
HDHD3-201ENST00000238379 Q8N1X5 172 aa8.74□□□□□ -1.01
HDHD3-201ENST00000238379 LINC00304Q8N9R0 145 aa8.74□□□□□ -1.01
HDHD3-201ENST00000238379 LIMD2Q9BT23 127 aa8.73□□□□□ -1.01
HDHD3-201ENST00000238379 NDUFB1O75438 58 aa8.72□□□□□ -1.01
HDHD3-201ENST00000238379 HCG22E2RYF7 251 aa8.71□□□□□ -1.01
HDHD3-201ENST00000238379 SPAG11AQ6PDA7 123 aa8.71□□□□□ -1.01
HDHD3-201ENST00000238379 C1orf195Q5TG92 126 aa8.7□□□□□ -1.02
HDHD3-201ENST00000238379 PKHD1L1Q86WI1 4243 aa8.7□□□□□ -1.02
HDHD3-201ENST00000238379 RPS29P62273 56 aaKnown RBP8.69□□□□□ -1.02
HDHD3-201ENST00000238379 A0A1B0GVX0 72 aa8.68□□□□□ -1.02
HDHD3-201ENST00000238379 LCE2DQ5TA82 110 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms