RNA–Protein interactions for RNA: ENST00000234179.6

PRKD3-201, Transcript of protein kinase D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKD3, Length 5,900 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-201ENST00000234179 RPL23P62829 140 aaKnown RBP1.28□□□□□ -2.2
PRKD3-201ENST00000234179 C6orf99Q4VX62 202 aa1.28□□□□□ -2.2
PRKD3-201ENST00000234179 H7C2G1 150 aa1.28□□□□□ -2.2
PRKD3-201ENST00000234179 IGLC3P0DOY3 106 aa1.28□□□□□ -2.2
PRKD3-201ENST00000234179 ATP5EP56381 51 aaPredicted RBP1.28□□□□□ -2.2
PRKD3-201ENST00000234179 RPL37AP8A6NKH3 93 aa1.28□□□□□ -2.2
PRKD3-201ENST00000234179 M0R2T5 61 aa1.28□□□□□ -2.2
PRKD3-201ENST00000234179 B5MCH6 92 aa1.28□□□□□ -2.21
PRKD3-201ENST00000234179 IGKV4-1P06312 121 aa1.28□□□□□ -2.21
PRKD3-201ENST00000234179 MUSTN1Q8IVN3 82 aa1.28□□□□□ -2.21
PRKD3-201ENST00000234179 SMCR5Q8TEV8 140 aa1.28□□□□□ -2.21
PRKD3-201ENST00000234179 SNHG12Q9BXW3 62 aa1.28□□□□□ -2.21
PRKD3-201ENST00000234179 SND1-IT1Q9HBX3 110 aa1.28□□□□□ -2.21
PRKD3-201ENST00000234179 TRBV20-1A0A075B6N2 111 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 J3KT08 172 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 TCL1BO95988 128 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 SPRR1BP22528 89 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 NPC2P61916 151 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 PRLHP81277 87 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 PMCHL1Q16048 86 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 FAM104AQ969W3 186 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 UBL5Q9BZL1 73 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 DHRS4-AS1Q9P1J3 65 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 Q8N377 158 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 C3orf22Q8N5N4 141 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 HIST1H2BLQ99880 126 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 IGLV8-61A0A075B6I0 122 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 IGKV2-28A0A075B6P5 120 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 IGKV2D-30A0A075B6S6 120 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 TRAV12-1A0A0B4J245 112 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 MYMXA0A1B0GTQ4 84 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 LINC01546A6NGU7 62 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 IGKV2D-28P01615 120 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 CXCL6P80162 114 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 LINC01554Q52M75 96 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 LINC00158P58513 81 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 NAA38Q9BRA0 125 aaKnown RBP1.27□□□□□ -2.21
PRKD3-201ENST00000234179 GAGE2AQ6NT46 116 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 C14orf132Q9NPU4 83 aa1.27□□□□□ -2.21
PRKD3-201ENST00000234179 SPATA45Q537H7 98 aa1.26□□□□□ -2.21
PRKD3-201ENST00000234179 PFN2P35080 140 aa1.26□□□□□ -2.21
PRKD3-201ENST00000234179 MOBPQ13875 183 aa1.26□□□□□ -2.21
PRKD3-201ENST00000234179 C1orf195Q5TG92 126 aa1.26□□□□□ -2.21
PRKD3-201ENST00000234179 SERP2Q8N6R1 65 aa1.26□□□□□ -2.21
PRKD3-201ENST00000234179 SPCS1Q9Y6A9 102 aa1.26□□□□□ -2.21
PRKD3-201ENST00000234179 A0A1B0GX51 115 aa1.26□□□□□ -2.21
PRKD3-201ENST00000234179 KRTAP10-6P60371 365 aaPredicted RBP1.26□□□□□ -2.21
PRKD3-201ENST00000234179 RPL37P61927 97 aaKnown RBP1.26□□□□□ -2.21
PRKD3-201ENST00000234179 MUC2Q02817 5179 aa1.26□□□□□ -2.21
PRKD3-201ENST00000234179 Q6ZRX8 168 aa1.26□□□□□ -2.21
PRKD3-201ENST00000234179 IMUPQ9GZP8 106 aa1.26□□□□□ -2.21
PRKD3-201ENST00000234179 BAALC-AS2P0C853 105 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 KRTAP5-9P26371 169 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 KTN1-AS1Q86SY8 53 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 BOD1L2Q8IYS8 172 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 ORMDL1Q9P0S3 153 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 TRBV7-6A0A0J9YX20 115 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 hADV29S1A0JD25 119 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 SPINK8P0C7L1 97 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 ZNF22P17026 224 aaPredicted RBP1.25□□□□□ -2.21
PRKD3-201ENST00000234179 DDTP30046 118 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 MT1HP80294 61 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 ETDBQ3ZM63 59 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 SPINT4Q6UDR6 99 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 PCP2Q8IVA1 136 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 ANAPC11Q9NYG5 84 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 A4D1N5 150 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 H3BT86 120 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 LEPROTO15243 131 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 PCOTHQ58A44 107 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 PPDPFLQ8WWR9 84 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 ZNF625Q96I27 306 aaPredicted RBP1.25□□□□□ -2.21
PRKD3-201ENST00000234179 COLCA2A8K830 154 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 IGKCP01834 107 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 PLNP26678 52 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 HIST3H2BBQ8N257 126 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 KRTAP4-16G5E9R7 235 aaPredicted RBP1.25□□□□□ -2.21
PRKD3-201ENST00000234179 IGLV6-57P01721 117 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 ACYP1P07311 99 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 Q6JHZ5 121 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 ATP11AUNQ6ZP68 121 aa1.25□□□□□ -2.21
PRKD3-201ENST00000234179 IGLV9-49A0A0B4J1Y8 123 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 HIST1H2BOP23527 126 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 HIST1H2BBP33778 126 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 HIST1H2BDP58876 126 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 HIST1H2BCP62807 126 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 UBE2V1Q13404 147 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 TAL2Q16559 108 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 HIST2H2BEQ16778 126 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.24□□□□□ -2.21
PRKD3-201ENST00000234179 HIST1H2BHQ93079 126 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 HIST1H2BNQ99877 126 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 HIST1H2BMQ99879 126 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 C11orf86A6NJI1 115 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 F8W1H4 67 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 TIMM17BO60830 172 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 SS18L2Q9UHA2 77 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 CHTOPQ9Y3Y2 248 aaKnown RBP1.24□□□□□ -2.21
PRKD3-201ENST00000234179 TRBV10-3A0A0K0K1G6 114 aa1.24□□□□□ -2.21
PRKD3-201ENST00000234179 TEX49A0A1B0GTD5 131 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms