RNA–Protein interactions for RNA: ENST00000233838.8

GGCX-201, Transcript of gamma-glutamyl carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGCX, Length 7,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-201ENST00000233838 ACANP16112 2415 aa4.8□□□□□ -1.64
GGCX-201ENST00000233838 LINC00472Q9H8W2 130 aa4.8□□□□□ -1.64
GGCX-201ENST00000233838 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
GGCX-201ENST00000233838 ADM2Q7Z4H4 148 aa4.8□□□□□ -1.64
GGCX-201ENST00000233838 FP248Q71RG6 208 aaPredicted RBP4.8□□□□□ -1.64
GGCX-201ENST00000233838 TRANK1O15050 2925 aa4.79□□□□□ -1.64
GGCX-201ENST00000233838 ZNF462Q96JM2 2506 aa4.79□□□□□ -1.64
GGCX-201ENST00000233838 SPRR1AP35321 89 aa4.79□□□□□ -1.64
GGCX-201ENST00000233838 KRTAP26-1Q6PEX3 210 aa4.78□□□□□ -1.64
GGCX-201ENST00000233838 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
GGCX-201ENST00000233838 MKI67P46013 3256 aaKnown RBP4.75□□□□□ -1.65
GGCX-201ENST00000233838 KRTAP10-1P60331 282 aa4.75□□□□□ -1.65
GGCX-201ENST00000233838 MTORP42345 2549 aa4.74□□□□□ -1.65
GGCX-201ENST00000233838 SPRR1BP22528 89 aa4.74□□□□□ -1.65
GGCX-201ENST00000233838 KRTAP10-2P60368 255 aa4.74□□□□□ -1.65
GGCX-201ENST00000233838 KRTAP1-5Q9BYS1 174 aa4.73□□□□□ -1.65
GGCX-201ENST00000233838 Q6ZR54 194 aa4.72□□□□□ -1.65
GGCX-201ENST00000233838 LAMA3Q16787 3333 aa4.7□□□□□ -1.66
GGCX-201ENST00000233838 PRRC2CQ9Y520 2896 aaKnown RBP4.7□□□□□ -1.66
GGCX-201ENST00000233838 LCE6AA0A183 80 aa4.69□□□□□ -1.66
GGCX-201ENST00000233838 POLQO75417 2590 aa4.69□□□□□ -1.66
GGCX-201ENST00000233838 OXTP01178 125 aa4.69□□□□□ -1.66
GGCX-201ENST00000233838 C20orf166-AS1Q96NR2 134 aa4.66□□□□□ -1.66
GGCX-201ENST00000233838 ZNF292O60281 2723 aa4.65□□□□□ -1.67
GGCX-201ENST00000233838 BRCA2P51587 3418 aa4.65□□□□□ -1.67
GGCX-201ENST00000233838 FLNBO75369 2602 aaKnown RBP4.63□□□□□ -1.67
GGCX-201ENST00000233838 PANO1I0J062 215 aa4.63□□□□□ -1.67
GGCX-201ENST00000233838 A0A087X002 238 aa4.62□□□□□ -1.67
GGCX-201ENST00000233838 PRUNE2Q8WUY3 3088 aa4.62□□□□□ -1.67
GGCX-201ENST00000233838 A8MU10 97 aa4.6□□□□□ -1.67
GGCX-201ENST00000233838 A8MUU9 505 aa4.6□□□□□ -1.67
GGCX-201ENST00000233838 USP24Q9UPU5 2620 aa4.6□□□□□ -1.67
GGCX-201ENST00000233838 KRTAP16-1A8MUX0 517 aa4.59□□□□□ -1.67
GGCX-201ENST00000233838 A0A0C4DFX4 3053 aa4.59□□□□□ -1.67
GGCX-201ENST00000233838 ASB16-AS1Q495Z4 193 aa4.59□□□□□ -1.68
GGCX-201ENST00000233838 NOTCH2NLQ7Z3S9 236 aa4.59□□□□□ -1.68
GGCX-201ENST00000233838 LAMA2P24043 3122 aaKnown RBP4.57□□□□□ -1.68
GGCX-201ENST00000233838 KRTAP29-1A8MX34 341 aaPredicted RBP4.57□□□□□ -1.68
GGCX-201ENST00000233838 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
GGCX-201ENST00000233838 KRTAP4-16G5E9R7 235 aaPredicted RBP4.57□□□□□ -1.68
GGCX-201ENST00000233838 HECTD1Q9ULT8 2610 aa4.56□□□□□ -1.68
GGCX-201ENST00000233838 FLG2Q5D862 2391 aaPredicted RBP4.55□□□□□ -1.68
GGCX-201ENST00000233838 HELZ2Q9BYK8 2649 aaKnown RBP4.54□□□□□ -1.68
GGCX-201ENST00000233838 FLNAP21333 2647 aaKnown RBP4.53□□□□□ -1.68
GGCX-201ENST00000233838 TRIOO75962 3097 aa4.52□□□□□ -1.69
GGCX-201ENST00000233838 TNRC18O15417 2968 aaPredicted RBP4.52□□□□□ -1.69
GGCX-201ENST00000233838 CDH23Q9H251 3354 aa4.51□□□□□ -1.69
GGCX-201ENST00000233838 KRTAP11-1Q8IUC1 163 aa4.51□□□□□ -1.69
GGCX-201ENST00000233838 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
GGCX-201ENST00000233838 RPS29P62273 56 aaKnown RBP4.5□□□□□ -1.69
GGCX-201ENST00000233838 CFAP54Q96N23 3096 aa4.49□□□□□ -1.69
GGCX-201ENST00000233838 A6NN06 94 aa4.49□□□□□ -1.69
GGCX-201ENST00000233838 UNC80Q8N2C7 3258 aa4.49□□□□□ -1.69
GGCX-201ENST00000233838 ITPR3Q14573 2671 aa4.49□□□□□ -1.69
GGCX-201ENST00000233838 CFAP46Q8IYW2 2715 aa4.48□□□□□ -1.69
GGCX-201ENST00000233838 NDUFAF8A1L188 74 aa4.48□□□□□ -1.69
GGCX-201ENST00000233838 DNAH14Q0VDD8 3507 aa4.47□□□□□ -1.69
GGCX-201ENST00000233838 MGAQ8IWI9 3026 aa4.47□□□□□ -1.69
GGCX-201ENST00000233838 TNP1P09430 55 aa4.47□□□□□ -1.69
GGCX-201ENST00000233838 AKAP13Q12802 2813 aa4.46□□□□□ -1.69
GGCX-201ENST00000233838 XIRP2A4UGR9 3374 aa4.46□□□□□ -1.7
GGCX-201ENST00000233838 MGAM2Q2M2H8 2515 aa4.44□□□□□ -1.7
GGCX-201ENST00000233838 CENPEQ02224 2701 aa4.44□□□□□ -1.7
GGCX-201ENST00000233838 KRTAP13-2Q52LG2 175 aa4.44□□□□□ -1.7
GGCX-201ENST00000233838 SZT2Q5T011 3432 aa4.44□□□□□ -1.7
GGCX-201ENST00000233838 WDFY4Q6ZS81 3184 aa4.43□□□□□ -1.7
GGCX-201ENST00000233838 DSPP15924 2871 aaKnown RBP4.42□□□□□ -1.7
GGCX-201ENST00000233838 Q6ZRN7 208 aaPredicted RBP4.42□□□□□ -1.7
GGCX-201ENST00000233838 IGSF10Q6WRI0 2623 aa4.41□□□□□ -1.7
GGCX-201ENST00000233838 COL6A3P12111 3177 aa4.41□□□□□ -1.7
GGCX-201ENST00000233838 KRTAP7-1Q8IUC3 87 aa4.41□□□□□ -1.7
GGCX-201ENST00000233838 SPTBN5Q9NRC6 3674 aaKnown RBP4.4□□□□□ -1.7
GGCX-201ENST00000233838 LAMA1P25391 3075 aa4.39□□□□□ -1.71
GGCX-201ENST00000233838 VPS13AQ96RL7 3174 aa4.37□□□□□ -1.71
GGCX-201ENST00000233838 CHD6Q8TD26 2715 aa4.37□□□□□ -1.71
GGCX-201ENST00000233838 ATRQ13535 2644 aa4.37□□□□□ -1.71
GGCX-201ENST00000233838 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
GGCX-201ENST00000233838 KRTAP10-8P60410 259 aa4.36□□□□□ -1.71
GGCX-201ENST00000233838 KRTAP13-1Q8IUC0 172 aa4.36□□□□□ -1.71
GGCX-201ENST00000233838 CELSR3Q9NYQ7 3312 aa4.35□□□□□ -1.71
GGCX-201ENST00000233838 VCANP13611 3396 aa4.34□□□□□ -1.71
GGCX-201ENST00000233838 FRYQ5TBA9 3013 aa4.34□□□□□ -1.71
GGCX-201ENST00000233838 MAST4O15021 2626 aa4.34□□□□□ -1.72
GGCX-201ENST00000233838 BAHCC1Q9P281 2608 aa4.33□□□□□ -1.72
GGCX-201ENST00000233838 UNC79Q9P2D8 2635 aa4.33□□□□□ -1.72
GGCX-201ENST00000233838 KMT2BQ9UMN6 2715 aaPredicted RBP4.32□□□□□ -1.72
GGCX-201ENST00000233838 USP34Q70CQ2 3546 aa4.3□□□□□ -1.72
GGCX-201ENST00000233838 TEP1Q99973 2627 aaKnown RBP4.29□□□□□ -1.72
GGCX-201ENST00000233838 NBEAL1Q6ZS30 2694 aa4.29□□□□□ -1.72
GGCX-201ENST00000233838 STAB1Q9NY15 2570 aa4.28□□□□□ -1.72
GGCX-201ENST00000233838 REV3LO60673 3130 aa4.28□□□□□ -1.72
GGCX-201ENST00000233838 TEX15Q9BXT5 2789 aa4.28□□□□□ -1.72
GGCX-201ENST00000233838 GCN1Q92616 2671 aaKnown RBP4.27□□□□□ -1.73
GGCX-201ENST00000233838 PP632Q6XCG6 107 aa4.27□□□□□ -1.73
GGCX-201ENST00000233838 LRBAP50851 2863 aa4.27□□□□□ -1.73
GGCX-201ENST00000233838 FRYLO94915 3013 aa4.27□□□□□ -1.73
GGCX-201ENST00000233838 FLNCQ14315 2725 aa4.26□□□□□ -1.73
GGCX-201ENST00000233838 FREM2Q5SZK8 3169 aa4.26□□□□□ -1.73
GGCX-201ENST00000233838 DMXL2Q8TDJ6 3036 aa4.26□□□□□ -1.73
GGCX-201ENST00000233838 DMBT1Q9UGM3 2413 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms