RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 C12orf57Q99622 126 aa6.63□□□□□ -1.35
SF3B6-201ENST00000233468 LPAP08519 4548 aa6.62□□□□□ -1.35
SF3B6-201ENST00000233468 LINC00304Q8N9R0 145 aa6.62□□□□□ -1.35
SF3B6-201ENST00000233468 CFC1BP0CG36 223 aa6.61□□□□□ -1.35
SF3B6-201ENST00000233468 CFC1P0CG37 223 aa6.61□□□□□ -1.35
SF3B6-201ENST00000233468 SMIM6P0DI80 62 aa6.61□□□□□ -1.35
SF3B6-201ENST00000233468 SSBP3-AS1Q7Z2R9 100 aa6.61□□□□□ -1.35
SF3B6-201ENST00000233468 LAMTOR3Q9UHA4 124 aa6.61□□□□□ -1.35
SF3B6-201ENST00000233468 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
SF3B6-201ENST00000233468 ST20-AS1Q8NBB2 130 aa6.6□□□□□ -1.35
SF3B6-201ENST00000233468 IGLV9-49A0A0B4J1Y8 123 aa6.59□□□□□ -1.35
SF3B6-201ENST00000233468 TEX49A0A1B0GTD5 131 aa6.59□□□□□ -1.35
SF3B6-201ENST00000233468 H7C2G1 150 aa6.59□□□□□ -1.35
SF3B6-201ENST00000233468 SPRR1BP22528 89 aa6.59□□□□□ -1.35
SF3B6-201ENST00000233468 Q1RN00 199 aa6.59□□□□□ -1.35
SF3B6-201ENST00000233468 PRO1854Q9UHT4 67 aa6.59□□□□□ -1.35
SF3B6-201ENST00000233468 hADV29S1A0JD25 119 aa6.58□□□□□ -1.36
SF3B6-201ENST00000233468 H0YGX0 51 aa6.58□□□□□ -1.36
SF3B6-201ENST00000233468 TSPAN13O95857 204 aa6.58□□□□□ -1.36
SF3B6-201ENST00000233468 C9orf153Q5TBE3 101 aa6.58□□□□□ -1.36
SF3B6-201ENST00000233468 LINC00575Q6W349 94 aa6.58□□□□□ -1.36
SF3B6-201ENST00000233468 FXYD2P54710 66 aa6.57□□□□□ -1.36
SF3B6-201ENST00000233468 MOBPQ13875 183 aa6.57□□□□□ -1.36
SF3B6-201ENST00000233468 Q8NBF4 154 aa6.57□□□□□ -1.36
SF3B6-201ENST00000233468 DEFB105AQ8NG35 78 aa6.57□□□□□ -1.36
SF3B6-201ENST00000233468 SPINK1P00995 79 aa6.56□□□□□ -1.36
SF3B6-201ENST00000233468 IGLV5-48A0A075B6I7 105 aa6.55□□□□□ -1.36
SF3B6-201ENST00000233468 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.54□□□□□ -1.36
SF3B6-201ENST00000233468 TSTD3H0UI37 97 aa6.53□□□□□ -1.36
SF3B6-201ENST00000233468 COX6CP09669 75 aa6.53□□□□□ -1.36
SF3B6-201ENST00000233468 PPDPFLQ8WWR9 84 aa6.53□□□□□ -1.36
SF3B6-201ENST00000233468 PRO1933Q9H354 126 aa6.53□□□□□ -1.36
SF3B6-201ENST00000233468 A0A1B0GX51 115 aa6.52□□□□□ -1.37
SF3B6-201ENST00000233468 F8WEM9 126 aa6.52□□□□□ -1.37
SF3B6-201ENST00000233468 M0R143 59 aa6.52□□□□□ -1.37
SF3B6-201ENST00000233468 RPS29P62273 56 aaKnown RBP6.52□□□□□ -1.37
SF3B6-201ENST00000233468 PRR4Q16378 134 aa6.52□□□□□ -1.37
SF3B6-201ENST00000233468 C21orf62-AS1Q17RA5 79 aa6.52□□□□□ -1.37
SF3B6-201ENST00000233468 OCIAD2Q56VL3 154 aa6.52□□□□□ -1.37
SF3B6-201ENST00000233468 Q6ZQY7 126 aa6.52□□□□□ -1.37
SF3B6-201ENST00000233468 PSMB2P49721 201 aa6.51□□□□□ -1.37
SF3B6-201ENST00000233468 LOC105371267A0A1B0GV96 52 aa6.5□□□□□ -1.37
SF3B6-201ENST00000233468 LINC01547P58512 204 aaPredicted RBP6.5□□□□□ -1.37
SF3B6-201ENST00000233468 Q8N377 158 aa6.5□□□□□ -1.37
SF3B6-201ENST00000233468 SNHG12Q9BXW3 62 aa6.49□□□□□ -1.37
SF3B6-201ENST00000233468 H3BQ85 93 aa6.48□□□□□ -1.37
SF3B6-201ENST00000233468 K7ERJ3 54 aa6.48□□□□□ -1.37
SF3B6-201ENST00000233468 TRIAP1O43715 76 aa6.48□□□□□ -1.37
SF3B6-201ENST00000233468 CD164Q04900 197 aa6.48□□□□□ -1.37
SF3B6-201ENST00000233468 SMIM29Q86T20 159 aa6.48□□□□□ -1.37
SF3B6-201ENST00000233468 LIMD2Q9BT23 127 aa6.48□□□□□ -1.37
SF3B6-201ENST00000233468 DNAL4O96015 105 aa6.47□□□□□ -1.37
SF3B6-201ENST00000233468 SCGB1C2P0DMR2 95 aa6.46□□□□□ -1.38
SF3B6-201ENST00000233468 Q6JHZ5 121 aa6.46□□□□□ -1.38
SF3B6-201ENST00000233468 FP248Q71RG6 208 aaPredicted RBP6.46□□□□□ -1.38
SF3B6-201ENST00000233468 MUC2Q02817 5179 aa6.45□□□□□ -1.38
SF3B6-201ENST00000233468 FAM218AQ96MZ4 157 aa6.44□□□□□ -1.38
SF3B6-201ENST00000233468 RETNLBQ9BQ08 111 aa6.44□□□□□ -1.38
SF3B6-201ENST00000233468 IGLV7-46A0A075B6I9 117 aa6.43□□□□□ -1.38
SF3B6-201ENST00000233468 IGLV8-61A0A075B6I0 122 aa6.42□□□□□ -1.38
SF3B6-201ENST00000233468 HRCT1Q6UXD1 115 aa6.42□□□□□ -1.38
SF3B6-201ENST00000233468 ORMDL1Q9P0S3 153 aa6.42□□□□□ -1.38
SF3B6-201ENST00000233468 FABP2P12104 132 aa6.41□□□□□ -1.38
SF3B6-201ENST00000233468 CLEC2BQ92478 149 aa6.41□□□□□ -1.38
SF3B6-201ENST00000233468 TMEM256-PLSCR3K7ERE1 68 aa6.4□□□□□ -1.38
SF3B6-201ENST00000233468 TCL1BO95988 128 aa6.4□□□□□ -1.38
SF3B6-201ENST00000233468 TRACP01848 142 aa6.4□□□□□ -1.38
SF3B6-201ENST00000233468 NDUFV3P56181 108 aaKnown RBP6.4□□□□□ -1.38
SF3B6-201ENST00000233468 LYRM7Q5U5X0 104 aa6.4□□□□□ -1.38
SF3B6-201ENST00000233468 Q5XG85 94 aa6.4□□□□□ -1.38
SF3B6-201ENST00000233468 TPRXLQ17RH7 258 aa6.39□□□□□ -1.39
SF3B6-201ENST00000233468 BATFQ16520 125 aa6.38□□□□□ -1.39
SF3B6-201ENST00000233468 H3BMG7 143 aa6.37□□□□□ -1.39
SF3B6-201ENST00000233468 LST1O00453 97 aa6.37□□□□□ -1.39
SF3B6-201ENST00000233468 IGFL1Q6UW32 110 aa6.37□□□□□ -1.39
SF3B6-201ENST00000233468 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
SF3B6-201ENST00000233468 H3BUT2 72 aa6.35□□□□□ -1.39
SF3B6-201ENST00000233468 UBE2V1Q13404 147 aa6.35□□□□□ -1.39
SF3B6-201ENST00000233468 TRBV7-7A0A0K0K1E9 115 aa6.34□□□□□ -1.39
SF3B6-201ENST00000233468 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
SF3B6-201ENST00000233468 TRBV20-1A0A075B6N2 111 aa6.33□□□□□ -1.4
SF3B6-201ENST00000233468 A0A0G2JQZ4 141 aa6.33□□□□□ -1.4
SF3B6-201ENST00000233468 Q6Q795 121 aa6.33□□□□□ -1.4
SF3B6-201ENST00000233468 TEN1Q86WV5 123 aa6.33□□□□□ -1.4
SF3B6-201ENST00000233468 SS18L2Q9UHA2 77 aa6.33□□□□□ -1.4
SF3B6-201ENST00000233468 ANKRD29Q8N6D5 301 aa6.32□□□□□ -1.4
SF3B6-201ENST00000233468 ASB16-AS1Q495Z4 193 aa6.31□□□□□ -1.4
SF3B6-201ENST00000233468 BAALC-AS2P0C853 105 aa6.3□□□□□ -1.4
SF3B6-201ENST00000233468 KRTAP13-3Q3SY46 172 aa6.3□□□□□ -1.4
SF3B6-201ENST00000233468 NAA38Q9BRA0 125 aaKnown RBP6.3□□□□□ -1.4
SF3B6-201ENST00000233468 RBM3P98179 157 aaKnown RBP6.29□□□□□ -1.4
SF3B6-201ENST00000233468 C1orf195Q5TG92 126 aa6.29□□□□□ -1.4
SF3B6-201ENST00000233468 FAT4Q6V0I7 4981 aa6.28□□□□□ -1.4
SF3B6-201ENST00000233468 DSCR8Q96T75 97 aa6.28□□□□□ -1.4
SF3B6-201ENST00000233468 TRBV7-4A0A0J9YYF1 115 aa6.27□□□□□ -1.41
SF3B6-201ENST00000233468 JMJD7-PLA2G4BH0Y9G9 81 aa6.26□□□□□ -1.41
SF3B6-201ENST00000233468 TAX1BP3O14907 124 aa6.26□□□□□ -1.41
SF3B6-201ENST00000233468 COL5A1-AS1Q5SY13 56 aa6.26□□□□□ -1.41
SF3B6-201ENST00000233468 A0A087WSZ3 146 aa6.25□□□□□ -1.41
SF3B6-201ENST00000233468 A0A0U1RQV1 116 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms