RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SPANXA2-OT1Q8N9U9 137 aa8.42□□□□□ -1.06
TGFBR3-201ENST00000212355 SPEGQ15772 3267 aa8.42□□□□□ -1.06
TGFBR3-201ENST00000212355 ATRQ13535 2644 aa8.41□□□□□ -1.06
TGFBR3-201ENST00000212355 LAMA1P25391 3075 aa8.4□□□□□ -1.06
TGFBR3-201ENST00000212355 Q6ZSA8 131 aa8.4□□□□□ -1.07
TGFBR3-201ENST00000212355 FLNAP21333 2647 aaKnown RBP8.39□□□□□ -1.07
TGFBR3-201ENST00000212355 Q1T7F1 81 aa8.38□□□□□ -1.07
TGFBR3-201ENST00000212355 Q5XG85 94 aa8.38□□□□□ -1.07
TGFBR3-201ENST00000212355 IGLV7-46A0A075B6I9 117 aa8.37□□□□□ -1.07
TGFBR3-201ENST00000212355 ITPR3Q14573 2671 aa8.37□□□□□ -1.07
TGFBR3-201ENST00000212355 M0R2T5 61 aa8.36□□□□□ -1.07
TGFBR3-201ENST00000212355 A0A1B0GU33 70 aa8.36□□□□□ -1.07
TGFBR3-201ENST00000212355 MMP24-AS1A0A0U1RRL7 71 aa8.35□□□□□ -1.07
TGFBR3-201ENST00000212355 FRYQ5TBA9 3013 aa8.35□□□□□ -1.07
TGFBR3-201ENST00000212355 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.08
TGFBR3-201ENST00000212355 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
TGFBR3-201ENST00000212355 MYO15AQ9UKN7 3530 aa8.33□□□□□ -1.08
TGFBR3-201ENST00000212355 SPINK7P58062 85 aa8.33□□□□□ -1.08
TGFBR3-201ENST00000212355 CFAP47Q6ZTR5 3102 aa8.31□□□□□ -1.08
TGFBR3-201ENST00000212355 KRTAP1-5Q9BYS1 174 aa8.31□□□□□ -1.08
TGFBR3-201ENST00000212355 SPTBN5Q9NRC6 3674 aaKnown RBP8.3□□□□□ -1.08
TGFBR3-201ENST00000212355 USP34Q70CQ2 3546 aa8.29□□□□□ -1.08
TGFBR3-201ENST00000212355 MAST4O15021 2626 aa8.29□□□□□ -1.08
TGFBR3-201ENST00000212355 AKAP13Q12802 2813 aa8.28□□□□□ -1.08
TGFBR3-201ENST00000212355 CSAG1Q6PB30 78 aa8.28□□□□□ -1.08
TGFBR3-201ENST00000212355 Q5W150 140 aa8.27□□□□□ -1.09
TGFBR3-201ENST00000212355 Q75L30 129 aa8.27□□□□□ -1.09
TGFBR3-201ENST00000212355 CHD6Q8TD26 2715 aa8.26□□□□□ -1.09
TGFBR3-201ENST00000212355 OXTP01178 125 aa8.26□□□□□ -1.09
TGFBR3-201ENST00000212355 S4R3F8 94 aa8.26□□□□□ -1.09
TGFBR3-201ENST00000212355 CENPEQ02224 2701 aa8.25□□□□□ -1.09
TGFBR3-201ENST00000212355 Q5VV11 94 aa8.25□□□□□ -1.09
TGFBR3-201ENST00000212355 CFAP46Q8IYW2 2715 aa8.25□□□□□ -1.09
TGFBR3-201ENST00000212355 ZCCHC13Q8WW36 166 aaKnown RBP8.25□□□□□ -1.09
TGFBR3-201ENST00000212355 LUZP6Q538Z0 58 aa8.24□□□□□ -1.09
TGFBR3-201ENST00000212355 TRANK1O15050 2925 aa8.22□□□□□ -1.09
TGFBR3-201ENST00000212355 KALRNO60229 2985 aa8.21□□□□□ -1.09
TGFBR3-201ENST00000212355 KRTAP10-2P60368 255 aa8.2□□□□□ -1.1
TGFBR3-201ENST00000212355 EYSQ5T1H1 3165 aa8.2□□□□□ -1.1
TGFBR3-201ENST00000212355 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
TGFBR3-201ENST00000212355 PANO1I0J062 215 aa8.19□□□□□ -1.1
TGFBR3-201ENST00000212355 LINC00472Q9H8W2 130 aa8.18□□□□□ -1.1
TGFBR3-201ENST00000212355 FRYLO94915 3013 aa8.18□□□□□ -1.1
TGFBR3-201ENST00000212355 MAP1AP78559 2803 aaPredicted RBP8.18□□□□□ -1.1
TGFBR3-201ENST00000212355 HELZ2Q9BYK8 2649 aaKnown RBP8.18□□□□□ -1.1
TGFBR3-201ENST00000212355 LINC01558Q9Y6Z2 57 aa8.18□□□□□ -1.1
TGFBR3-201ENST00000212355 H3BS24 57 aa8.17□□□□□ -1.1
TGFBR3-201ENST00000212355 SPRR1AP35321 89 aa8.16□□□□□ -1.1
TGFBR3-201ENST00000212355 BOD1L1Q8NFC6 3051 aa8.16□□□□□ -1.1
TGFBR3-201ENST00000212355 KRTAP10-1P60331 282 aa8.15□□□□□ -1.1
TGFBR3-201ENST00000212355 KRTAP26-1Q6PEX3 210 aa8.15□□□□□ -1.1
TGFBR3-201ENST00000212355 SPATA8Q6RVD6 105 aa8.15□□□□□ -1.11
TGFBR3-201ENST00000212355 DSPP15924 2871 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-201ENST00000212355 TEP1Q99973 2627 aaKnown RBP8.14□□□□□ -1.11
TGFBR3-201ENST00000212355 TEX15Q9BXT5 2789 aa8.1□□□□□ -1.11
TGFBR3-201ENST00000212355 WDFY3Q8IZQ1 3526 aa8.1□□□□□ -1.11
TGFBR3-201ENST00000212355 Q5VSD8 79 aa8.1□□□□□ -1.11
TGFBR3-201ENST00000212355 LRBAP50851 2863 aa8.09□□□□□ -1.11
TGFBR3-201ENST00000212355 LINC00483Q53H64 154 aa8.09□□□□□ -1.11
TGFBR3-201ENST00000212355 NBEAL2Q6ZNJ1 2754 aa8.08□□□□□ -1.12
TGFBR3-201ENST00000212355 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
TGFBR3-201ENST00000212355 R4GN34 69 aa8.08□□□□□ -1.12
TGFBR3-201ENST00000212355 A0A087X002 238 aa8.07□□□□□ -1.12
TGFBR3-201ENST00000212355 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
TGFBR3-201ENST00000212355 GCN1Q92616 2671 aaKnown RBP8.06□□□□□ -1.12
TGFBR3-201ENST00000212355 DMXL2Q8TDJ6 3036 aa8.03□□□□□ -1.12
TGFBR3-201ENST00000212355 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
TGFBR3-201ENST00000212355 NBEAQ8NFP9 2946 aa8.02□□□□□ -1.13
TGFBR3-201ENST00000212355 SETXQ7Z333 2677 aaKnown RBP8.01□□□□□ -1.13
TGFBR3-201ENST00000212355 M0QZ58 72 aa8.01□□□□□ -1.13
TGFBR3-201ENST00000212355 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
TGFBR3-201ENST00000212355 Q6ZR54 194 aa7.98□□□□□ -1.13
TGFBR3-201ENST00000212355 SPRR1BP22528 89 aa7.97□□□□□ -1.13
TGFBR3-201ENST00000212355 H1FX-AS1Q4G0G2 97 aa7.97□□□□□ -1.13
TGFBR3-201ENST00000212355 NBEAL1Q6ZS30 2694 aa7.96□□□□□ -1.14
TGFBR3-201ENST00000212355 CRYBG3Q68DQ2 2970 aa7.95□□□□□ -1.14
TGFBR3-201ENST00000212355 ROMO1P60602 79 aa7.94□□□□□ -1.14
TGFBR3-201ENST00000212355 ASPMQ8IZT6 3477 aa7.93□□□□□ -1.14
TGFBR3-201ENST00000212355 ADGRG4Q8IZF6 3080 aa7.93□□□□□ -1.14
TGFBR3-201ENST00000212355 A8MU10 97 aa7.93□□□□□ -1.14
TGFBR3-201ENST00000212355 RPL37P61927 97 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-201ENST00000212355 ASH1LQ9NR48 2969 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-201ENST00000212355 UNC79Q9P2D8 2635 aa7.91□□□□□ -1.14
TGFBR3-201ENST00000212355 KRTAP4-16G5E9R7 235 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-201ENST00000212355 ATMQ13315 3056 aa7.9□□□□□ -1.14
TGFBR3-201ENST00000212355 DCHS1Q96JQ0 3298 aa7.89□□□□□ -1.15
TGFBR3-201ENST00000212355 STAB1Q9NY15 2570 aa7.87□□□□□ -1.15
TGFBR3-201ENST00000212355 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
TGFBR3-201ENST00000212355 TACC2O95359 2948 aa7.86□□□□□ -1.15
TGFBR3-201ENST00000212355 KRTAP29-1A8MX34 341 aaPredicted RBP7.85□□□□□ -1.15
TGFBR3-201ENST00000212355 KRTAP7-1Q8IUC3 87 aa7.83□□□□□ -1.16
TGFBR3-201ENST00000212355 COL6A5A8TX70 2615 aa7.83□□□□□ -1.16
TGFBR3-201ENST00000212355 SEC61BP60468 96 aaKnown RBP7.82□□□□□ -1.16
TGFBR3-201ENST00000212355 COL12A1Q99715 3063 aa7.82□□□□□ -1.16
TGFBR3-201ENST00000212355 ZFHX4Q86UP3 3567 aa7.82□□□□□ -1.16
TGFBR3-201ENST00000212355 LCE6AA0A183 80 aa7.81□□□□□ -1.16
TGFBR3-201ENST00000212355 ZNF292O60281 2723 aa7.78□□□□□ -1.16
TGFBR3-201ENST00000212355 A0A0A0MQY5 61 aa7.77□□□□□ -1.17
TGFBR3-201ENST00000212355 NOTCH1P46531 2555 aa7.77□□□□□ -1.17
TGFBR3-201ENST00000212355 LOC400499M0QZD8 3231 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms