RNA–Protein interactions for RNA: ENST00000209875.8

CBX5-201, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 11,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-201ENST00000209875 PLAC8Q9NZF1 115 aa3.68□□□□□ -1.82
CBX5-201ENST00000209875 Q8N9P0 234 aaPredicted RBP3.67□□□□□ -1.82
CBX5-201ENST00000209875 KRTAP10-3P60369 221 aa3.66□□□□□ -1.82
CBX5-201ENST00000209875 EP400Q96L91 3159 aa3.66□□□□□ -1.82
CBX5-201ENST00000209875 FAM168BA1KXE4 195 aa3.66□□□□□ -1.82
CBX5-201ENST00000209875 DSCR10P59022 87 aa3.66□□□□□ -1.82
CBX5-201ENST00000209875 NBEAL2Q6ZNJ1 2754 aa3.65□□□□□ -1.82
CBX5-201ENST00000209875 A0A1B0GU33 70 aa3.65□□□□□ -1.83
CBX5-201ENST00000209875 A0A087X002 238 aa3.65□□□□□ -1.83
CBX5-201ENST00000209875 FP248Q71RG6 208 aaPredicted RBP3.64□□□□□ -1.83
CBX5-201ENST00000209875 Q5VV11 94 aa3.63□□□□□ -1.83
CBX5-201ENST00000209875 NDUFAF8A1L188 74 aa3.63□□□□□ -1.83
CBX5-201ENST00000209875 GOLGB1Q14789 3259 aaKnown RBP3.62□□□□□ -1.83
CBX5-201ENST00000209875 A0A1W2PNN7 141 aa3.62□□□□□ -1.83
CBX5-201ENST00000209875 RPS29P62273 56 aaKnown RBP3.61□□□□□ -1.83
CBX5-201ENST00000209875 SRCAPQ6ZRS2 3230 aa3.61□□□□□ -1.83
CBX5-201ENST00000209875 J3QL48 77 aa3.61□□□□□ -1.83
CBX5-201ENST00000209875 LINC00472Q9H8W2 130 aa3.59□□□□□ -1.83
CBX5-201ENST00000209875 MMP24-AS1A0A0U1RRL7 71 aa3.59□□□□□ -1.84
CBX5-201ENST00000209875 HRES1P13985 223 aa3.58□□□□□ -1.84
CBX5-201ENST00000209875 UTRNP46939 3433 aa3.58□□□□□ -1.84
CBX5-201ENST00000209875 COX6B2Q6YFQ2 88 aa3.58□□□□□ -1.84
CBX5-201ENST00000209875 ZCCHC13Q8WW36 166 aaKnown RBP3.57□□□□□ -1.84
CBX5-201ENST00000209875 KRTAP26-1Q6PEX3 210 aa3.56□□□□□ -1.84
CBX5-201ENST00000209875 PRR26Q8N8Z3 221 aa3.56□□□□□ -1.84
CBX5-201ENST00000209875 ROMO1P60602 79 aa3.56□□□□□ -1.84
CBX5-201ENST00000209875 Q6ZR54 194 aa3.54□□□□□ -1.84
CBX5-201ENST00000209875 FLNCQ14315 2725 aa3.54□□□□□ -1.84
CBX5-201ENST00000209875 CSAG1Q6PB30 78 aa3.54□□□□□ -1.84
CBX5-201ENST00000209875 A0A0D9SG42 100 aa3.54□□□□□ -1.84
CBX5-201ENST00000209875 KRTAP21-3Q3LHN1 58 aa3.54□□□□□ -1.84
CBX5-201ENST00000209875 Q8N1X5 172 aa3.53□□□□□ -1.84
CBX5-201ENST00000209875 CELSR2Q9HCU4 2923 aa3.53□□□□□ -1.84
CBX5-201ENST00000209875 RPL37P61927 97 aaKnown RBP3.53□□□□□ -1.84
CBX5-201ENST00000209875 CASC10Q5T4H9 136 aa3.53□□□□□ -1.84
CBX5-201ENST00000209875 KRTAP4-16G5E9R7 235 aaPredicted RBP3.53□□□□□ -1.84
CBX5-201ENST00000209875 SPINK7P58062 85 aa3.53□□□□□ -1.85
CBX5-201ENST00000209875 Q6ZSA8 131 aa3.52□□□□□ -1.85
CBX5-201ENST00000209875 C9orf92A6NGG3 77 aa3.51□□□□□ -1.85
CBX5-201ENST00000209875 KALRNO60229 2985 aa3.51□□□□□ -1.85
CBX5-201ENST00000209875 LRBAP50851 2863 aa3.51□□□□□ -1.85
CBX5-201ENST00000209875 CYSTM1Q9H1C7 97 aa3.5□□□□□ -1.85
CBX5-201ENST00000209875 S4R3F8 94 aa3.5□□□□□ -1.85
CBX5-201ENST00000209875 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.5□□□□□ -1.85
CBX5-201ENST00000209875 NOTCH2NLQ7Z3S9 236 aa3.5□□□□□ -1.85
CBX5-201ENST00000209875 NF1P21359 2839 aa3.5□□□□□ -1.85
CBX5-201ENST00000209875 Q5W150 140 aa3.5□□□□□ -1.85
CBX5-201ENST00000209875 SPATA8Q6RVD6 105 aa3.5□□□□□ -1.85
CBX5-201ENST00000209875 LCE6AA0A183 80 aa3.48□□□□□ -1.85
CBX5-201ENST00000209875 TENM1Q9UKZ4 2725 aa3.48□□□□□ -1.85
CBX5-201ENST00000209875 PDZD2O15018 2839 aa3.48□□□□□ -1.85
CBX5-201ENST00000209875 KRTAP29-1A8MX34 341 aaPredicted RBP3.48□□□□□ -1.85
CBX5-201ENST00000209875 PRAC1Q96KF2 57 aa3.48□□□□□ -1.85
CBX5-201ENST00000209875 OXTP01178 125 aa3.47□□□□□ -1.85
CBX5-201ENST00000209875 A6NN06 94 aa3.46□□□□□ -1.85
CBX5-201ENST00000209875 H1FX-AS1Q4G0G2 97 aa3.46□□□□□ -1.85
CBX5-201ENST00000209875 A0A0G2JQZ4 141 aa3.46□□□□□ -1.86
CBX5-201ENST00000209875 R4GN34 69 aa3.46□□□□□ -1.86
CBX5-201ENST00000209875 Q8NDZ9 215 aa3.44□□□□□ -1.86
CBX5-201ENST00000209875 KRTAP25-1Q3LHN0 102 aa3.43□□□□□ -1.86
CBX5-201ENST00000209875 CENPFP49454 3210 aa3.43□□□□□ -1.86
CBX5-201ENST00000209875 ANAPC11Q9NYG5 84 aa3.43□□□□□ -1.86
CBX5-201ENST00000209875 TRIOO75962 3097 aa3.41□□□□□ -1.86
CBX5-201ENST00000209875 KRTAP1-5Q9BYS1 174 aa3.41□□□□□ -1.86
CBX5-201ENST00000209875 NIPBLQ6KC79 2804 aaeCLIP3.4□□□□□ -1.86
CBX5-201ENST00000209875 PLAC4Q8WY50 150 aa3.4□□□□□ -1.86
CBX5-201ENST00000209875 SMR3BP02814 79 aaPredicted RBP3.4□□□□□ -1.87
CBX5-201ENST00000209875 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
CBX5-201ENST00000209875 KRTAP13-1Q8IUC0 172 aa3.39□□□□□ -1.87
CBX5-201ENST00000209875 M0QZ58 72 aa3.39□□□□□ -1.87
CBX5-201ENST00000209875 Q6ZRN7 208 aaPredicted RBP3.39□□□□□ -1.87
CBX5-201ENST00000209875 PANO1I0J062 215 aa3.38□□□□□ -1.87
CBX5-201ENST00000209875 TENM2Q9NT68 2774 aa3.38□□□□□ -1.87
CBX5-201ENST00000209875 DNAH12Q6ZR08 3092 aa3.37□□□□□ -1.87
CBX5-201ENST00000209875 TRANK1O15050 2925 aa3.37□□□□□ -1.87
CBX5-201ENST00000209875 CRYBG3Q68DQ2 2970 aa3.36□□□□□ -1.87
CBX5-201ENST00000209875 KRTAP10-1P60331 282 aa3.35□□□□□ -1.87
CBX5-201ENST00000209875 Q5VSD8 79 aa3.35□□□□□ -1.87
CBX5-201ENST00000209875 TGP01266 2768 aa3.34□□□□□ -1.87
CBX5-201ENST00000209875 PCNTO95613 3336 aa3.3□□□□□ -1.88
CBX5-201ENST00000209875 M0R2T5 61 aa3.29□□□□□ -1.88
CBX5-201ENST00000209875 KRTAP10-2P60368 255 aa3.29□□□□□ -1.88
CBX5-201ENST00000209875 A8MUU9 505 aa3.28□□□□□ -1.88
CBX5-201ENST00000209875 CHD7Q9P2D1 2997 aa3.28□□□□□ -1.88
CBX5-201ENST00000209875 C20orf166-AS1Q96NR2 134 aa3.28□□□□□ -1.88
CBX5-201ENST00000209875 ADM2Q7Z4H4 148 aa3.28□□□□□ -1.89
CBX5-201ENST00000209875 CEP350Q5VT06 3117 aa3.26□□□□□ -1.89
CBX5-201ENST00000209875 MXRA5Q9NR99 2828 aa3.26□□□□□ -1.89
CBX5-201ENST00000209875 KRTAP7-1Q8IUC3 87 aa3.26□□□□□ -1.89
CBX5-201ENST00000209875 BRCA2P51587 3418 aa3.25□□□□□ -1.89
CBX5-201ENST00000209875 KRTAP11-1Q8IUC1 163 aa3.24□□□□□ -1.89
CBX5-201ENST00000209875 MEGF8Q7Z7M0 2845 aa3.24□□□□□ -1.89
CBX5-201ENST00000209875 TENM4Q6N022 2769 aa3.23□□□□□ -1.89
CBX5-201ENST00000209875 KRTAP13-2Q52LG2 175 aa3.23□□□□□ -1.89
CBX5-201ENST00000209875 TNP1P09430 55 aa3.21□□□□□ -1.9
CBX5-201ENST00000209875 LAMA2P24043 3122 aaKnown RBP3.21□□□□□ -1.9
CBX5-201ENST00000209875 ZANQ9Y493 2812 aa3.2□□□□□ -1.9
CBX5-201ENST00000209875 TACC2O95359 2948 aa3.19□□□□□ -1.9
CBX5-201ENST00000209875 NBEAQ8NFP9 2946 aa3.18□□□□□ -1.9
CBX5-201ENST00000209875 A0A0C4DFX4 3053 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms