RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 PRR4Q16378 134 aa12.8□□□□□ -0.36
RCN1-201ENST00000054950 BRK1Q8WUW1 75 aa12.79□□□□□ -0.36
RCN1-201ENST00000054950 A0A096LNI7 61 aa12.79□□□□□ -0.36
RCN1-201ENST00000054950 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.78□□□□□ -0.36
RCN1-201ENST00000054950 WFDC13Q8IUB5 93 aa12.78□□□□□ -0.36
RCN1-201ENST00000054950 HCG22E2RYF7 251 aa12.77□□□□□ -0.36
RCN1-201ENST00000054950 ZCCHC13Q8WW36 166 aaKnown RBP12.77□□□□□ -0.37
RCN1-201ENST00000054950 RPL37AP61513 92 aaKnown RBP12.76□□□□□ -0.37
RCN1-201ENST00000054950 A0A087WSZ3 146 aa12.76□□□□□ -0.37
RCN1-201ENST00000054950 KRTAP1-5Q9BYS1 174 aa12.74□□□□□ -0.37
RCN1-201ENST00000054950 hDV103S1A0JD37 113 aa12.74□□□□□ -0.37
RCN1-201ENST00000054950 C1orf64Q8NEQ6 169 aa12.74□□□□□ -0.37
RCN1-201ENST00000054950 PKIGQ9Y2B9 76 aa12.73□□□□□ -0.37
RCN1-201ENST00000054950 KRTAP11-1Q8IUC1 163 aa12.72□□□□□ -0.37
RCN1-201ENST00000054950 CHTF8P0CG12 524 aa12.69□□□□□ -0.38
RCN1-201ENST00000054950 UBE2AP49459 152 aa12.66□□□□□ -0.38
RCN1-201ENST00000054950 PHF5AQ7RTV0 110 aaKnown RBP12.66□□□□□ -0.38
RCN1-201ENST00000054950 C16orf90A8MZG2 172 aa12.65□□□□□ -0.38
RCN1-201ENST00000054950 STAB2Q8WWQ8 2551 aa12.63□□□□□ -0.39
RCN1-201ENST00000054950 COL7A1Q02388 2944 aa12.63□□□□□ -0.39
RCN1-201ENST00000054950 DNAH7Q8WXX0 4024 aa12.63□□□□□ -0.39
RCN1-201ENST00000054950 TENM2Q9NT68 2774 aa12.62□□□□□ -0.39
RCN1-201ENST00000054950 IGLV8-61A0A075B6I0 122 aa12.6□□□□□ -0.39
RCN1-201ENST00000054950 K7EIL1 84 aa12.6□□□□□ -0.39
RCN1-201ENST00000054950 LINC00208Q96KT6 92 aa12.6□□□□□ -0.39
RCN1-201ENST00000054950 PSPHP1O15172 72 aa12.57□□□□□ -0.4
RCN1-201ENST00000054950 KRTAP29-1A8MX34 341 aaPredicted RBP12.56□□□□□ -0.4
RCN1-201ENST00000054950 CNBPP62633 177 aaKnown RBP12.56□□□□□ -0.4
RCN1-201ENST00000054950 MGAM2Q2M2H8 2515 aa12.54□□□□□ -0.4
RCN1-201ENST00000054950 TRAV22A0A0B4J277 110 aa12.54□□□□□ -0.4
RCN1-201ENST00000054950 MP68P56378 58 aa12.54□□□□□ -0.4
RCN1-201ENST00000054950 CASC2Q6XLA1 102 aa12.54□□□□□ -0.4
RCN1-201ENST00000054950 CYP4F30PQ9H0H9 118 aa12.53□□□□□ -0.4
RCN1-201ENST00000054950 H0Y9P7 68 aa12.51□□□□□ -0.41
RCN1-201ENST00000054950 Q1T7F1 81 aa12.51□□□□□ -0.41
RCN1-201ENST00000054950 PRR15Q8IV56 129 aa12.51□□□□□ -0.41
RCN1-201ENST00000054950 UBE2DNLQ8IWF7 75 aa12.49□□□□□ -0.41
RCN1-201ENST00000054950 PANO1I0J062 215 aa12.48□□□□□ -0.41
RCN1-201ENST00000054950 LINC00472Q9H8W2 130 aa12.48□□□□□ -0.41
RCN1-201ENST00000054950 NDUFB1O75438 58 aa12.47□□□□□ -0.41
RCN1-201ENST00000054950 A8MWP4 228 aa12.46□□□□□ -0.42
RCN1-201ENST00000054950 H0Y9J4 135 aa12.45□□□□□ -0.42
RCN1-201ENST00000054950 B9D2Q9BPU9 175 aa12.45□□□□□ -0.42
RCN1-201ENST00000054950 SPRR1BP22528 89 aa12.44□□□□□ -0.42
RCN1-201ENST00000054950 PLECQ15149 4684 aaKnown RBP12.44□□□□□ -0.42
RCN1-201ENST00000054950 C1orf195Q5TG92 126 aa12.43□□□□□ -0.42
RCN1-201ENST00000054950 A8MUN3 132 aa12.42□□□□□ -0.42
RCN1-201ENST00000054950 IGLV9-49A0A0B4J1Y8 123 aa12.38□□□□□ -0.43
RCN1-201ENST00000054950 MMP24-AS1A0A0U1RRL7 71 aa12.38□□□□□ -0.43
RCN1-201ENST00000054950 APLNQ9ULZ1 77 aa12.38□□□□□ -0.43
RCN1-201ENST00000054950 C9orf163Q8N9P6 203 aa12.38□□□□□ -0.43
RCN1-201ENST00000054950 A8MU10 97 aa12.37□□□□□ -0.43
RCN1-201ENST00000054950 C14orf177Q52M58 125 aa12.35□□□□□ -0.43
RCN1-201ENST00000054950 DYNC2H1Q8NCM8 4307 aaKnown RBP12.35□□□□□ -0.43
RCN1-201ENST00000054950 FRAS1Q86XX4 4008 aa12.34□□□□□ -0.43
RCN1-201ENST00000054950 KRTAP13-1Q8IUC0 172 aa12.32□□□□□ -0.44
RCN1-201ENST00000054950 SPANXA2-OT1Q8N9U9 137 aa12.31□□□□□ -0.44
RCN1-201ENST00000054950 PCOTHQ58A44 107 aa12.3□□□□□ -0.44
RCN1-201ENST00000054950 Q96NJ1 140 aa12.3□□□□□ -0.44
RCN1-201ENST00000054950 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.3□□□□□ -0.44
RCN1-201ENST00000054950 Q5VV11 94 aa12.3□□□□□ -0.44
RCN1-201ENST00000054950 H3BPC8 53 aa12.29□□□□□ -0.44
RCN1-201ENST00000054950 Q8N9P0 234 aaPredicted RBP12.27□□□□□ -0.44
RCN1-201ENST00000054950 ANAPC11Q9NYG5 84 aa12.25□□□□□ -0.45
RCN1-201ENST00000054950 DNAH8Q96JB1 4490 aa12.25□□□□□ -0.45
RCN1-201ENST00000054950 MOBPQ13875 183 aa12.25□□□□□ -0.45
RCN1-201ENST00000054950 NBDYA0A0U1RRE5 68 aa12.24□□□□□ -0.45
RCN1-201ENST00000054950 Q6ZRN7 208 aaPredicted RBP12.23□□□□□ -0.45
RCN1-201ENST00000054950 COA5Q86WW8 74 aa12.23□□□□□ -0.45
RCN1-201ENST00000054950 PRR15LQ9BU68 103 aa12.23□□□□□ -0.45
RCN1-201ENST00000054950 V9GYY9 64 aa12.22□□□□□ -0.45
RCN1-201ENST00000054950 IGHV6-1A0A0B4J1U7 121 aa12.21□□□□□ -0.45
RCN1-201ENST00000054950 CD164Q04900 197 aa12.21□□□□□ -0.45
RCN1-201ENST00000054950 HECTD4Q9Y4D8 3996 aa12.21□□□□□ -0.45
RCN1-201ENST00000054950 STARD9Q9P2P6 4700 aa12.2□□□□□ -0.46
RCN1-201ENST00000054950 MDFIQ99750 246 aa12.2□□□□□ -0.46
RCN1-201ENST00000054950 CHKB-CPT1BH3BT56 60 aa12.2□□□□□ -0.46
RCN1-201ENST00000054950 NDUFS5O43920 106 aa12.2□□□□□ -0.46
RCN1-201ENST00000054950 C8orf17Q9NRJ1 99 aa12.2□□□□□ -0.46
RCN1-201ENST00000054950 SPACA4Q8TDM5 124 aa12.19□□□□□ -0.46
RCN1-201ENST00000054950 IGLV7-46A0A075B6I9 117 aa12.18□□□□□ -0.46
RCN1-201ENST00000054950 A0A087X002 238 aa12.17□□□□□ -0.46
RCN1-201ENST00000054950 ASB16-AS1Q495Z4 193 aa12.17□□□□□ -0.46
RCN1-201ENST00000054950 NOTCH2NLQ7Z3S9 236 aa12.17□□□□□ -0.46
RCN1-201ENST00000054950 LIMD2Q9BT23 127 aa12.14□□□□□ -0.47
RCN1-201ENST00000054950 WWC2-AS2Q96NR7 200 aa12.13□□□□□ -0.47
RCN1-201ENST00000054950 VPS13DQ5THJ4 4388 aa12.13□□□□□ -0.47
RCN1-201ENST00000054950 KMT2AQ03164 3969 aa12.12□□□□□ -0.47
RCN1-201ENST00000054950 PSORS1C2Q9UIG4 136 aa12.12□□□□□ -0.47
RCN1-201ENST00000054950 A0A1B0GVX0 72 aa12.11□□□□□ -0.47
RCN1-201ENST00000054950 LINC00483Q53H64 154 aa12.11□□□□□ -0.47
RCN1-201ENST00000054950 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
RCN1-201ENST00000054950 DNAH17Q9UFH2 4485 aa12.1□□□□□ -0.47
RCN1-201ENST00000054950 PMAIP1Q13794 54 aa12.1□□□□□ -0.47
RCN1-201ENST00000054950 TP53AIP1Q9HCN2 124 aa12.09□□□□□ -0.47
RCN1-201ENST00000054950 Q6ZR54 194 aa12.09□□□□□ -0.47
RCN1-201ENST00000054950 SPAG11AQ6PDA7 123 aa12.07□□□□□ -0.48
RCN1-201ENST00000054950 A0A087WTM6 91 aa12.05□□□□□ -0.48
RCN1-201ENST00000054950 CDK2AP2O75956 126 aa12.05□□□□□ -0.48
RCN1-201ENST00000054950 SPINK6Q6UWN8 80 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms