RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	SMIM27	A0A1W2PRY6	76 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	LINC01546	A6NGU7	62 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	IGIP	A6NJ69	53 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	LOC730098	B7Z3J9	87 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	KRTAP5-8	O75690	187 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	LCE3D	Q9BYE3	92 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	ASH1L	Q9NR48	2969 aa	Known RBP	0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	APLN	Q9ULZ1	77 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	CACNA1C	Q13936	2221 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	ZNF236	Q9UL36	1845 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	OTOGL	Q3ZCN5	2332 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	EFCAB6	Q5THR3	1501 aa		0.54	□□□□□ -2.32
MECP2-222	ENST00000637533	IQGAP2	Q13576	1575 aa		0.53	□□□□□ -2.32
MECP2-222	ENST00000637533	TNRC6C	Q9HCJ0	1690 aa	Known RBP	0.53	□□□□□ -2.32
MECP2-222	ENST00000637533	DDX60L	Q5H9U9	1706 aa	Known RBP	0.53	□□□□□ -2.32
MECP2-222	ENST00000637533	PLXNB2	O15031	1838 aa		0.53	□□□□□ -2.32
MECP2-222	ENST00000637533	GPR98	Q8WXG9	6306 aa		0.53	□□□□□ -2.32
MECP2-222	ENST00000637533	NDUFA3	O95167	84 aa		0.53	□□□□□ -2.32
MECP2-222	ENST00000637533	DEFB131A	P59861	70 aa		0.53	□□□□□ -2.32
MECP2-222	ENST00000637533	KRTAP5-4	Q6L8H1	288 aa		0.53	□□□□□ -2.32
MECP2-222	ENST00000637533	KRTAP5-2	Q701N4	177 aa		0.53	□□□□□ -2.32
MECP2-222	ENST00000637533	WFDC13	Q8IUB5	93 aa		0.53	□□□□□ -2.32
MECP2-222	ENST00000637533		U3KQA8	63 aa		0.53	□□□□□ -2.32
MECP2-222	ENST00000637533	AGL	P35573	1532 aa		0.53	□□□□□ -2.33
MECP2-222	ENST00000637533	ZDBF2	Q9HCK1	2354 aa		0.53	□□□□□ -2.33
MECP2-222	ENST00000637533	LY75	O60449	1722 aa		0.52	□□□□□ -2.33
MECP2-222	ENST00000637533	ANKRD17	O75179	2603 aa	Known RBP	0.52	□□□□□ -2.33
MECP2-222	ENST00000637533	ABCA1	O95477	2261 aa		0.52	□□□□□ -2.33
MECP2-222	ENST00000637533	IAPP	P10997	89 aa		0.52	□□□□□ -2.33
MECP2-222	ENST00000637533	KRTAP10-4	P60372	401 aa	Predicted RBP	0.52	□□□□□ -2.33
MECP2-222	ENST00000637533	TSC2	P49815	1807 aa		0.52	□□□□□ -2.33
MECP2-222	ENST00000637533	CACNA1E	Q15878	2313 aa		0.52	□□□□□ -2.33
MECP2-222	ENST00000637533	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.51	□□□□□ -2.33
MECP2-222	ENST00000637533	C9orf92	A6NGG3	77 aa		0.51	□□□□□ -2.33
MECP2-222	ENST00000637533	URB1	O60287	2271 aa	Known RBP	0.51	□□□□□ -2.33
MECP2-222	ENST00000637533	TNC	P24821	2201 aa		0.51	□□□□□ -2.33
MECP2-222	ENST00000637533	H1FX-AS1	Q4G0G2	97 aa		0.51	□□□□□ -2.33
MECP2-222	ENST00000637533	SMIM2	Q9BVW6	85 aa		0.51	□□□□□ -2.33
MECP2-222	ENST00000637533	PIEZO2	Q9H5I5	2752 aa		0.51	□□□□□ -2.33
MECP2-222	ENST00000637533	ASXL3	Q9C0F0	2248 aa		0.5	□□□□□ -2.33
MECP2-222	ENST00000637533	NRAP	Q86VF7	1730 aa		0.5	□□□□□ -2.33
MECP2-222	ENST00000637533		A8MTW9	85 aa		0.5	□□□□□ -2.33
MECP2-222	ENST00000637533	CRIP1	P50238	77 aa		0.5	□□□□□ -2.33
MECP2-222	ENST00000637533	WT1-AS	Q06250	92 aa		0.5	□□□□□ -2.33
MECP2-222	ENST00000637533	LCE1C	Q5T751	118 aa		0.5	□□□□□ -2.33
MECP2-222	ENST00000637533	LCE1B	Q5T7P3	118 aa		0.5	□□□□□ -2.33
MECP2-222	ENST00000637533	LINC00308	Q8TCZ7	52 aa		0.5	□□□□□ -2.33
MECP2-222	ENST00000637533	PARP4	Q9UKK3	1724 aa	Known RBP	0.5	□□□□□ -2.33
MECP2-222	ENST00000637533	ZNF831	Q5JPB2	1677 aa		0.49	□□□□□ -2.33
MECP2-222	ENST00000637533	LAMC1	P11047	1609 aa		0.49	□□□□□ -2.33
MECP2-222	ENST00000637533	SAMD9L	Q8IVG5	1584 aa		0.49	□□□□□ -2.33
MECP2-222	ENST00000637533	COL6A6	A6NMZ7	2263 aa		0.49	□□□□□ -2.33
MECP2-222	ENST00000637533	MEGF8	Q7Z7M0	2845 aa		0.49	□□□□□ -2.33
MECP2-222	ENST00000637533	KRTAP5-1	Q6L8H4	278 aa		0.49	□□□□□ -2.33
MECP2-222	ENST00000637533	TRIOBP	Q9H2D6	2365 aa		0.49	□□□□□ -2.33
MECP2-222	ENST00000637533	DOT1L	Q8TEK3	1739 aa		0.49	□□□□□ -2.33
MECP2-222	ENST00000637533	WNK2	Q9Y3S1	2297 aa		0.49	□□□□□ -2.33
MECP2-222	ENST00000637533	NOTCH2	Q04721	2471 aa		0.48	□□□□□ -2.33
MECP2-222	ENST00000637533	MUC6	Q6W4X9	2439 aa		0.48	□□□□□ -2.33
MECP2-222	ENST00000637533	ROS1	P08922	2347 aa		0.48	□□□□□ -2.33
MECP2-222	ENST00000637533		M0R2T5	61 aa		0.48	□□□□□ -2.33
MECP2-222	ENST00000637533	PRLH	P81277	87 aa		0.48	□□□□□ -2.33
MECP2-222	ENST00000637533	PRB3	Q04118	309 aa	Predicted RBP	0.48	□□□□□ -2.33
MECP2-222	ENST00000637533	DEFB135	Q30KP9	77 aa		0.48	□□□□□ -2.33
MECP2-222	ENST00000637533	FAM208A	Q9UK61	1670 aa	Known RBP	0.48	□□□□□ -2.33
MECP2-222	ENST00000637533	SPTBN2	O15020	2390 aa		0.48	□□□□□ -2.33
MECP2-222	ENST00000637533	GLI2	P10070	1586 aa		0.48	□□□□□ -2.33
MECP2-222	ENST00000637533	MROH2A	A6NES4	1674 aa		0.47	□□□□□ -2.33
MECP2-222	ENST00000637533	PTPRQ	Q9UMZ3	2332 aa		0.47	□□□□□ -2.33
MECP2-222	ENST00000637533	AHNAK	Q09666	5890 aa	Known RBP	0.47	□□□□□ -2.33
MECP2-222	ENST00000637533	DOPEY2	Q9Y3R5	2298 aa		0.47	□□□□□ -2.33
MECP2-222	ENST00000637533	TOP2A	P11388	1531 aa	Known RBP	0.47	□□□□□ -2.33
MECP2-222	ENST00000637533	ATP7A	Q04656	1500 aa		0.47	□□□□□ -2.33
MECP2-222	ENST00000637533	PTPRZ1	P23471	2315 aa	Predicted RBP	0.47	□□□□□ -2.33
MECP2-222	ENST00000637533	NRXN3	Q9Y4C0	1643 aa		0.46	□□□□□ -2.34
MECP2-222	ENST00000637533	CNOT1	A5YKK6	2376 aa	Known RBP	0.46	□□□□□ -2.34
MECP2-222	ENST00000637533	HELZ2	Q9BYK8	2649 aa	Known RBP	0.46	□□□□□ -2.34
MECP2-222	ENST00000637533		H0YAA0	97 aa		0.46	□□□□□ -2.34
MECP2-222	ENST00000637533	NDUFA1	O15239	70 aa		0.46	□□□□□ -2.34
MECP2-222	ENST00000637533	DEFB130B	P0DP73	79 aa		0.46	□□□□□ -2.34
MECP2-222	ENST00000637533	DEFB130A	P0DP74	79 aa		0.46	□□□□□ -2.34
MECP2-222	ENST00000637533	KRTAP5-11	Q6L8G4	156 aa		0.46	□□□□□ -2.34
MECP2-222	ENST00000637533	ABCA12	Q86UK0	2595 aa		0.45	□□□□□ -2.34
MECP2-222	ENST00000637533		M0QZ58	72 aa		0.45	□□□□□ -2.34
MECP2-222	ENST00000637533	PTPN13	Q12923	2485 aa		0.45	□□□□□ -2.34
MECP2-222	ENST00000637533	CHD9	Q3L8U1	2897 aa		0.45	□□□□□ -2.34
MECP2-222	ENST00000637533	C4A	P0C0L4	1744 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	C4B	P0C0L5	1744 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	TTC28	Q96AY4	2481 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	BPTF	Q12830	3046 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	ITSN2	Q9NZM3	1697 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	TENM4	Q6N022	2769 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	C2CD3	Q4AC94	2353 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	IGLV5-48	A0A075B6I7	105 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	MMP24-AS1	A0A0U1RRL7	71 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533		M0QY20	66 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	RPS27	P42677	84 aa	Known RBP	0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	RPS27L	Q71UM5	84 aa	Known RBP	0.44	□□□□□ -2.34
MECP2-222	ENST00000637533		A0A1B0GUL6	1792 aa		0.44	□□□□□ -2.34
MECP2-222	ENST00000637533	OBSCN	Q5VST9	7968 aa		0.44	□□□□□ -2.34

Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms