RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 DEFB116Q30KQ4 102 aa9.75□□□□□ -0.85
NEDD4L-238ENST00000635997 SMIM26A0A096LP01 95 aa9.74□□□□□ -0.85
NEDD4L-238ENST00000635997 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
NEDD4L-238ENST00000635997 CHKB-CPT1BH3BT56 60 aa9.74□□□□□ -0.85
NEDD4L-238ENST00000635997 APCP25054 2843 aa9.74□□□□□ -0.85
NEDD4L-238ENST00000635997 SMCR5Q8TEV8 140 aa9.73□□□□□ -0.85
NEDD4L-238ENST00000635997 PRR4Q16378 134 aa9.72□□□□□ -0.85
NEDD4L-238ENST00000635997 SERP1Q9Y6X1 66 aa9.72□□□□□ -0.85
NEDD4L-238ENST00000635997 PRO0628Q9UI54 55 aa9.72□□□□□ -0.85
NEDD4L-238ENST00000635997 ZNF706Q9Y5V0 76 aaPredicted RBP9.72□□□□□ -0.85
NEDD4L-238ENST00000635997 ATP5EP2Q5VTU8 51 aa9.71□□□□□ -0.86
NEDD4L-238ENST00000635997 PLA2G1BP04054 148 aaKnown RBP9.71□□□□□ -0.86
NEDD4L-238ENST00000635997 CHTF8P0CG12 524 aa9.7□□□□□ -0.86
NEDD4L-238ENST00000635997 H3BNG1 76 aa9.7□□□□□ -0.86
NEDD4L-238ENST00000635997 LINC00476Q8WZB0 136 aa9.7□□□□□ -0.86
NEDD4L-238ENST00000635997 NIPBLQ6KC79 2804 aaeCLIP9.7□□□□□ -0.86
NEDD4L-238ENST00000635997 A0A087WSZ3 146 aa9.7□□□□□ -0.86
NEDD4L-238ENST00000635997 LINC00167Q96N53 147 aa9.69□□□□□ -0.86
NEDD4L-238ENST00000635997 Q9BRP9 147 aa9.69□□□□□ -0.86
NEDD4L-238ENST00000635997 RTL8CO15255 209 aa9.67□□□□□ -0.86
NEDD4L-238ENST00000635997 ZNF575Q86XF7 245 aa9.67□□□□□ -0.86
NEDD4L-238ENST00000635997 LINC00575Q6W349 94 aa9.66□□□□□ -0.86
NEDD4L-238ENST00000635997 FAM218AQ96MZ4 157 aa9.66□□□□□ -0.86
NEDD4L-238ENST00000635997 IGLV5-45A0A087WSX0 123 aa9.66□□□□□ -0.86
NEDD4L-238ENST00000635997 SEC61GP60059 68 aa9.65□□□□□ -0.86
NEDD4L-238ENST00000635997 SPTSSBQ8NFR3 76 aa9.65□□□□□ -0.86
NEDD4L-238ENST00000635997 NF1P21359 2839 aa9.65□□□□□ -0.86
NEDD4L-238ENST00000635997 WDFY3Q8IZQ1 3526 aa9.65□□□□□ -0.87
NEDD4L-238ENST00000635997 TRAV7A0A075B6U4 112 aa9.64□□□□□ -0.87
NEDD4L-238ENST00000635997 PHF5AQ7RTV0 110 aaKnown RBP9.64□□□□□ -0.87
NEDD4L-238ENST00000635997 LINC01561Q8N1V8 128 aa9.64□□□□□ -0.87
NEDD4L-238ENST00000635997 DCHS2Q6V1P9 2916 aa9.64□□□□□ -0.87
NEDD4L-238ENST00000635997 EIF4EBP3O60516 100 aaPredicted RBP9.63□□□□□ -0.87
NEDD4L-238ENST00000635997 SMR3BP02814 79 aaPredicted RBP9.63□□□□□ -0.87
NEDD4L-238ENST00000635997 DNAH10OSP0CZ25 163 aa9.63□□□□□ -0.87
NEDD4L-238ENST00000635997 FAM30AQ9NZY2 134 aa9.62□□□□□ -0.87
NEDD4L-238ENST00000635997 FAM19A3Q7Z5A8 133 aa9.61□□□□□ -0.87
NEDD4L-238ENST00000635997 PRYO14603 147 aa9.6□□□□□ -0.87
NEDD4L-238ENST00000635997 CASC2Q6XLA1 102 aa9.6□□□□□ -0.87
NEDD4L-238ENST00000635997 MUC3AQ02505 3323 aa9.6□□□□□ -0.87
NEDD4L-238ENST00000635997 IGHV6-1A0A0B4J1U7 121 aa9.6□□□□□ -0.87
NEDD4L-238ENST00000635997 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
NEDD4L-238ENST00000635997 NDUFC1O43677 76 aa9.59□□□□□ -0.87
NEDD4L-238ENST00000635997 LITAFQ99732 161 aa9.59□□□□□ -0.87
NEDD4L-238ENST00000635997 RETNLBQ9BQ08 111 aa9.59□□□□□ -0.87
NEDD4L-238ENST00000635997 TRBV7-6A0A0J9YX20 115 aa9.59□□□□□ -0.87
NEDD4L-238ENST00000635997 Q8N9L7 120 aa9.59□□□□□ -0.87
NEDD4L-238ENST00000635997 Q6ZRP5 223 aa9.59□□□□□ -0.87
NEDD4L-238ENST00000635997 DCHS1Q96JQ0 3298 aa9.58□□□□□ -0.88
NEDD4L-238ENST00000635997 FAM168BA1KXE4 195 aa9.58□□□□□ -0.88
NEDD4L-238ENST00000635997 LINC01547P58512 204 aaPredicted RBP9.57□□□□□ -0.88
NEDD4L-238ENST00000635997 APLNQ9ULZ1 77 aa9.57□□□□□ -0.88
NEDD4L-238ENST00000635997 DMDP11532 3685 aa9.57□□□□□ -0.88
NEDD4L-238ENST00000635997 F8WDY8 70 aa9.56□□□□□ -0.88
NEDD4L-238ENST00000635997 EPM2AB3EWF7 344 aa9.55□□□□□ -0.88
NEDD4L-238ENST00000635997 LCE6AA0A183 80 aa9.55□□□□□ -0.88
NEDD4L-238ENST00000635997 ATP5EP56381 51 aaPredicted RBP9.54□□□□□ -0.88
NEDD4L-238ENST00000635997 ST20-AS1Q8NBB2 130 aa9.54□□□□□ -0.88
NEDD4L-238ENST00000635997 MOBPQ13875 183 aa9.53□□□□□ -0.88
NEDD4L-238ENST00000635997 PSPHP1O15172 72 aa9.52□□□□□ -0.88
NEDD4L-238ENST00000635997 RPL37AP61513 92 aaKnown RBP9.52□□□□□ -0.88
NEDD4L-238ENST00000635997 Q6ZVQ6 151 aa9.52□□□□□ -0.88
NEDD4L-238ENST00000635997 LINC00208Q96KT6 92 aa9.52□□□□□ -0.89
NEDD4L-238ENST00000635997 FBN2P35556 2912 aa9.51□□□□□ -0.89
NEDD4L-238ENST00000635997 SPACA4Q8TDM5 124 aa9.51□□□□□ -0.89
NEDD4L-238ENST00000635997 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
NEDD4L-238ENST00000635997 PMAIP1Q13794 54 aa9.49□□□□□ -0.89
NEDD4L-238ENST00000635997 SERTAD4-AS1Q5TG53 156 aa9.49□□□□□ -0.89
NEDD4L-238ENST00000635997 A0A087WTM6 91 aa9.49□□□□□ -0.89
NEDD4L-238ENST00000635997 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
NEDD4L-238ENST00000635997 TNP2Q05952 138 aa9.47□□□□□ -0.89
NEDD4L-238ENST00000635997 CYSTM1Q9H1C7 97 aa9.47□□□□□ -0.89
NEDD4L-238ENST00000635997 VPREB1P12018 145 aa9.46□□□□□ -0.89
NEDD4L-238ENST00000635997 LINC00612Q8N6U2 182 aa9.46□□□□□ -0.9
NEDD4L-238ENST00000635997 PRR34Q9NV39 138 aa9.46□□□□□ -0.9
NEDD4L-238ENST00000635997 C9orf129Q5T035 196 aaKnown RBP9.45□□□□□ -0.9
NEDD4L-238ENST00000635997 PCOTHQ58A44 107 aa9.45□□□□□ -0.9
NEDD4L-238ENST00000635997 Q6ZRX8 168 aa9.45□□□□□ -0.9
NEDD4L-238ENST00000635997 ASPMQ8IZT6 3477 aa9.44□□□□□ -0.9
NEDD4L-238ENST00000635997 C15orf56Q8N910 161 aa9.44□□□□□ -0.9
NEDD4L-238ENST00000635997 ELOF1P60002 83 aaKnown RBP9.44□□□□□ -0.9
NEDD4L-238ENST00000635997 RELNP78509 3460 aa9.43□□□□□ -0.9
NEDD4L-238ENST00000635997 FLG2Q5D862 2391 aaPredicted RBP9.42□□□□□ -0.9
NEDD4L-238ENST00000635997 A0A0G2JQZ4 141 aa9.38□□□□□ -0.91
NEDD4L-238ENST00000635997 A0A1W2PNN7 141 aa9.38□□□□□ -0.91
NEDD4L-238ENST00000635997 A6NED7 52 aa9.38□□□□□ -0.91
NEDD4L-238ENST00000635997 H7BZZ5 65 aa9.36□□□□□ -0.91
NEDD4L-238ENST00000635997 HCG22E2RYF7 251 aa9.36□□□□□ -0.91
NEDD4L-238ENST00000635997 LAMA5O15230 3695 aa9.36□□□□□ -0.91
NEDD4L-238ENST00000635997 ZFHX4Q86UP3 3567 aa9.36□□□□□ -0.91
NEDD4L-238ENST00000635997 SPINK1P00995 79 aa9.36□□□□□ -0.91
NEDD4L-238ENST00000635997 ANAPC11Q9NYG5 84 aa9.36□□□□□ -0.91
NEDD4L-238ENST00000635997 Q5XG85 94 aa9.35□□□□□ -0.91
NEDD4L-238ENST00000635997 LINC00528Q8N1L1 170 aa9.35□□□□□ -0.91
NEDD4L-238ENST00000635997 IGLV6-57P01721 117 aa9.35□□□□□ -0.91
NEDD4L-238ENST00000635997 LINC01600Q96MT4 127 aa9.34□□□□□ -0.91
NEDD4L-238ENST00000635997 IGKV2D-30A0A075B6S6 120 aa9.33□□□□□ -0.92
NEDD4L-238ENST00000635997 IGKV2-30P06310 120 aa9.33□□□□□ -0.92
NEDD4L-238ENST00000635997 BCE1O60756 84 aa9.33□□□□□ -0.92
NEDD4L-238ENST00000635997 OXTP01178 125 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms