RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 LOC107984156A0A0G2JMH3 177 aa10.84□□□□□ -0.67
TARDBP-228ENST00000629725 PLNP26678 52 aa10.84□□□□□ -0.67
TARDBP-228ENST00000629725 LINC00310P59036 64 aa10.84□□□□□ -0.67
TARDBP-228ENST00000629725 ARL17AQ8IVW1 177 aa10.84□□□□□ -0.67
TARDBP-228ENST00000629725 J3QQQ9 107 aa10.83□□□□□ -0.68
TARDBP-228ENST00000629725 TRBV10-2A0A0K0K1G8 114 aa10.82□□□□□ -0.68
TARDBP-228ENST00000629725 JOSD1Q15040 202 aaPredicted RBP10.82□□□□□ -0.68
TARDBP-228ENST00000629725 COX6B2Q6YFQ2 88 aa10.82□□□□□ -0.68
TARDBP-228ENST00000629725 HERVK_113P61574 105 aa10.81□□□□□ -0.68
TARDBP-228ENST00000629725 PMCHL2Q9BQD1 86 aa10.81□□□□□ -0.68
TARDBP-228ENST00000629725 MIEN1Q9BRT3 115 aa10.81□□□□□ -0.68
TARDBP-228ENST00000629725 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.8□□□□□ -0.68
TARDBP-228ENST00000629725 DPM2O94777 84 aa10.8□□□□□ -0.68
TARDBP-228ENST00000629725 IGLV6-57P01721 117 aa10.8□□□□□ -0.68
TARDBP-228ENST00000629725 FABP4P15090 132 aa10.8□□□□□ -0.68
TARDBP-228ENST00000629725 LGALS3P17931 250 aaKnown RBP10.8□□□□□ -0.68
TARDBP-228ENST00000629725 HRCT1Q6UXD1 115 aa10.8□□□□□ -0.68
TARDBP-228ENST00000629725 SPANXB1Q9NS25 103 aaPredicted RBP10.8□□□□□ -0.68
TARDBP-228ENST00000629725 HSPB8Q9UJY1 196 aa10.8□□□□□ -0.68
TARDBP-228ENST00000629725 NMUP48645 174 aa10.79□□□□□ -0.68
TARDBP-228ENST00000629725 ST20-AS1Q8NBB2 130 aa10.79□□□□□ -0.68
TARDBP-228ENST00000629725 IGKCP01834 107 aa10.78□□□□□ -0.68
TARDBP-228ENST00000629725 S100A7L2Q5SY68 101 aa10.78□□□□□ -0.68
TARDBP-228ENST00000629725 NDUFC2O95298 119 aa10.76□□□□□ -0.69
TARDBP-228ENST00000629725 TRAV23DV6A0A075B6W5 121 aa10.75□□□□□ -0.69
TARDBP-228ENST00000629725 SLC7A5P1Q8MH63 180 aa10.75□□□□□ -0.69
TARDBP-228ENST00000629725 C5orf52A6NGY3 159 aa10.74□□□□□ -0.69
TARDBP-228ENST00000629725 NPC2P61916 151 aa10.74□□□□□ -0.69
TARDBP-228ENST00000629725 SOSTDC1Q6X4U4 206 aa10.73□□□□□ -0.69
TARDBP-228ENST00000629725 A0A0J9YXY3 114 aa10.72□□□□□ -0.69
TARDBP-228ENST00000629725 EIF4EBP3O60516 100 aaPredicted RBP10.72□□□□□ -0.69
TARDBP-228ENST00000629725 ADAMTSL4-AS1Q5T5F5 129 aa10.72□□□□□ -0.69
TARDBP-228ENST00000629725 ZNF73O43830 326 aaPredicted RBP10.71□□□□□ -0.69
TARDBP-228ENST00000629725 SLC25A34Q6PIV7 304 aa10.71□□□□□ -0.69
TARDBP-228ENST00000629725 RPL37P61927 97 aaKnown RBP10.69□□□□□ -0.7
TARDBP-228ENST00000629725 COLCA2A8K830 154 aa10.68□□□□□ -0.7
TARDBP-228ENST00000629725 E9PLD3 99 aa10.68□□□□□ -0.7
TARDBP-228ENST00000629725 SPRR1BP22528 89 aa10.68□□□□□ -0.7
TARDBP-228ENST00000629725 HINT1P49773 126 aaPredicted RBP10.67□□□□□ -0.7
TARDBP-228ENST00000629725 LAMTOR3Q9UHA4 124 aa10.67□□□□□ -0.7
TARDBP-228ENST00000629725 CD164Q04900 197 aa10.64□□□□□ -0.71
TARDBP-228ENST00000629725 H7C2G1 150 aa10.63□□□□□ -0.71
TARDBP-228ENST00000629725 CBY1Q9Y3M2 126 aa10.63□□□□□ -0.71
TARDBP-228ENST00000629725 SSPOA2VEC9 5147 aa10.62□□□□□ -0.71
TARDBP-228ENST00000629725 SYS1-DBNDD2H3BUS1 97 aa10.62□□□□□ -0.71
TARDBP-228ENST00000629725 OR13C6PQ8NH95 151 aa10.62□□□□□ -0.71
TARDBP-228ENST00000629725 LINC00308Q8TCZ7 52 aa10.62□□□□□ -0.71
TARDBP-228ENST00000629725 LITAFQ99732 161 aa10.62□□□□□ -0.71
TARDBP-228ENST00000629725 SPANXCQ9NY87 97 aa10.62□□□□□ -0.71
TARDBP-228ENST00000629725 USH2AO75445 5202 aa10.61□□□□□ -0.71
TARDBP-228ENST00000629725 C1orf195Q5TG92 126 aa10.6□□□□□ -0.71
TARDBP-228ENST00000629725 DHRS4-AS1Q9P1J3 65 aa10.6□□□□□ -0.71
TARDBP-228ENST00000629725 Q5XG85 94 aa10.59□□□□□ -0.71
TARDBP-228ENST00000629725 PRO1933Q9H354 126 aa10.59□□□□□ -0.71
TARDBP-228ENST00000629725 TIMM17BO60830 172 aa10.58□□□□□ -0.72
TARDBP-228ENST00000629725 Q1RN00 199 aa10.57□□□□□ -0.72
TARDBP-228ENST00000629725 LINC01545Q5VT33 79 aa10.57□□□□□ -0.72
TARDBP-228ENST00000629725 ZNF815PA8K554 130 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST1H2BKO60814 126 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST1H2BJP06899 126 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST1H2BOP23527 126 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST1H2BBP33778 126 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST1H2BDP58876 126 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST1H2BCP62807 126 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST2H2BEQ16778 126 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST1H2BHQ93079 126 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST1H2BNQ99877 126 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 HIST1H2BMQ99879 126 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 SPANXDQ9BXN6 97 aa10.56□□□□□ -0.72
TARDBP-228ENST00000629725 Q6Q795 121 aa10.55□□□□□ -0.72
TARDBP-228ENST00000629725 TTTY13Q9BZ97 58 aa10.55□□□□□ -0.72
TARDBP-228ENST00000629725 CFC1P0CG37 223 aa10.54□□□□□ -0.72
TARDBP-228ENST00000629725 TAL2Q16559 108 aa10.54□□□□□ -0.72
TARDBP-228ENST00000629725 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
TARDBP-228ENST00000629725 AKR1D1P51857 326 aa10.53□□□□□ -0.72
TARDBP-228ENST00000629725 DEFB105AQ8NG35 78 aa10.53□□□□□ -0.72
TARDBP-228ENST00000629725 COX7BP24311 80 aa10.52□□□□□ -0.73
TARDBP-228ENST00000629725 ELOF1P60002 83 aaKnown RBP10.52□□□□□ -0.73
TARDBP-228ENST00000629725 SMIM29Q86T20 159 aa10.52□□□□□ -0.73
TARDBP-228ENST00000629725 C6orf99Q4VX62 202 aa10.51□□□□□ -0.73
TARDBP-228ENST00000629725 TEX49A0A1B0GTD5 131 aa10.5□□□□□ -0.73
TARDBP-228ENST00000629725 LINC00518Q8N0U6 118 aa10.5□□□□□ -0.73
TARDBP-228ENST00000629725 S100A1P23297 94 aa10.49□□□□□ -0.73
TARDBP-228ENST00000629725 C3orf79P0CE67 100 aa10.48□□□□□ -0.73
TARDBP-228ENST00000629725 FCGBPQ9Y6R7 5405 aaPredicted RBP10.46□□□□□ -0.73
TARDBP-228ENST00000629725 A0A0G2JQZ4 141 aa10.46□□□□□ -0.73
TARDBP-228ENST00000629725 SCGB1D4Q6XE38 83 aa10.46□□□□□ -0.73
TARDBP-228ENST00000629725 KRTAP9-8Q9BYQ0 159 aa10.46□□□□□ -0.73
TARDBP-228ENST00000629725 KRTDAPP60985 99 aa10.45□□□□□ -0.74
TARDBP-228ENST00000629725 TRBV7-6A0A0J9YX20 115 aa10.42□□□□□ -0.74
TARDBP-228ENST00000629725 TCL1BO95988 128 aa10.42□□□□□ -0.74
TARDBP-228ENST00000629725 ATP11AUNQ6ZP68 121 aa10.42□□□□□ -0.74
TARDBP-228ENST00000629725 ANKRD39Q53RE8 183 aa10.41□□□□□ -0.74
TARDBP-228ENST00000629725 A0A1B0GWB2 263 aa10.4□□□□□ -0.74
TARDBP-228ENST00000629725 A6NDN8 102 aa10.4□□□□□ -0.74
TARDBP-228ENST00000629725 COPS9Q8WXC6 57 aa10.4□□□□□ -0.74
TARDBP-228ENST00000629725 IFITM1P13164 125 aa10.39□□□□□ -0.75
TARDBP-228ENST00000629725 C20orf202A1L168 122 aa10.38□□□□□ -0.75
TARDBP-228ENST00000629725 COA6Q5JTJ3 125 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 208.8 ms