RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 CAMK2N2Q96S95 79 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 OSTCQ9NRP0 149 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 CDC42SE2Q9NRR3 84 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 NAT8BQ9UHF3 227 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 LAMTOR2Q9Y2Q5 125 aa1.58□□□□□ -2.16
CDKL5-208ENST00000624953 TRBV24-1A0A075B6N3 115 aa1.57□□□□□ -2.16
CDKL5-208ENST00000624953 IGKV2-28A0A075B6P5 120 aa1.57□□□□□ -2.16
CDKL5-208ENST00000624953 C7orf77A4D0Y5 90 aa1.57□□□□□ -2.16
CDKL5-208ENST00000624953 C19orf71A6NCJ1 209 aa1.57□□□□□ -2.16
CDKL5-208ENST00000624953 K7EMI3 77 aa1.57□□□□□ -2.16
CDKL5-208ENST00000624953 IGKV2D-28P01615 120 aa1.57□□□□□ -2.16
CDKL5-208ENST00000624953 PPBPP02775 128 aa1.57□□□□□ -2.16
CDKL5-208ENST00000624953 S100A2P29034 98 aa1.57□□□□□ -2.16
CDKL5-208ENST00000624953 HERVK_113P63121 156 aa1.57□□□□□ -2.16
CDKL5-208ENST00000624953 C5orf38Q86SI9 138 aa1.57□□□□□ -2.16
CDKL5-208ENST00000624953 MRPL35Q9NZE8 188 aaKnown RBP1.57□□□□□ -2.16
CDKL5-208ENST00000624953 TRBV20OR9-2A0A075B6H5 130 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 A0A1B0GUT8 65 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 A0A1B0GV50 99 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 A0A1B0GV72 72 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 SDHAF1A6NFY7 115 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 APCSP02743 223 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 TRGC1P0CF51 173 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 SMIM17P0DL12 118 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 ZNF25P17030 456 aaPredicted RBP1.56□□□□□ -2.16
CDKL5-208ENST00000624953 UBE2BP63146 152 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 HBBP68871 147 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 S100A12P80511 92 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 SPAG11BQ08648 103 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 DEFB116Q30KQ4 102 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 LUZP6Q538Z0 58 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 AMMECR1LQ6DCA0 310 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 LYZL1Q6UWQ5 148 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 SCGB1D4Q6XE38 83 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 Q6ZUT4 128 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 CAMK2N1Q7Z7J9 78 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 ORAOV1Q8WV07 137 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 CNFNQ9BYD5 112 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 UBE2D4Q9Y2X8 147 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 MUC12Q9UKN1 5478 aa1.56□□□□□ -2.16
CDKL5-208ENST00000624953 SMIM27A0A1W2PRY6 76 aa1.55□□□□□ -2.16
CDKL5-208ENST00000624953 C20orf202A1L168 122 aa1.55□□□□□ -2.16
CDKL5-208ENST00000624953 HIGD1CA8MV81 97 aa1.55□□□□□ -2.16
CDKL5-208ENST00000624953 COX7A2LO14548 114 aa1.55□□□□□ -2.16
CDKL5-208ENST00000624953 NCR2O95944 276 aa1.55□□□□□ -2.16
CDKL5-208ENST00000624953 POLR2KP53803 58 aaKnown RBP1.55□□□□□ -2.16
CDKL5-208ENST00000624953 C2orf82Q6UX34 121 aa1.55□□□□□ -2.16
CDKL5-208ENST00000624953 CHCHD1Q96BP2 118 aaKnown RBP1.55□□□□□ -2.16
CDKL5-208ENST00000624953 ANAPC13Q9BS18 74 aa1.55□□□□□ -2.16
CDKL5-208ENST00000624953 HSPB8Q9UJY1 196 aa1.55□□□□□ -2.16
CDKL5-208ENST00000624953 C22orf24Q9Y442 160 aa1.55□□□□□ -2.16
CDKL5-208ENST00000624953 TRAPPC1Q9Y5R8 145 aa1.55□□□□□ -2.16
CDKL5-208ENST00000624953 TRAV13-1A0A0B4J241 112 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 TRBV6-5A0A0K0K1A5 114 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 COLCA2A8K830 154 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 A8MUN3 132 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 I3L3M4 83 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 LST1O00453 97 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 NDUFA1O15239 70 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 NUPR1O60356 82 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 BCE1O60756 84 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 SCO1O75880 301 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 ADCYAP1P18509 176 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 FABP9Q0Z7S8 132 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 FAM229BQ4G0N7 80 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 LINC00483Q53H64 154 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 PCOTHQ58A44 107 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 FP248Q71RG6 208 aaPredicted RBP1.54□□□□□ -2.16
CDKL5-208ENST00000624953 FA2HQ7L5A8 372 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 BAGE3Q86Y29 109 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 ORMDL3Q8N138 153 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 OR10D4PQ8NGN7 298 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 YPEL4Q96NS1 127 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 XAGE1AQ9HD64 81 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 NXT2Q9NPJ8 142 aaKnown RBP1.54□□□□□ -2.16
CDKL5-208ENST00000624953 TP73-AS1Q9UF72 201 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 V9GYV3 84 aa1.54□□□□□ -2.16
CDKL5-208ENST00000624953 TRBV27A0A0K0K1C4 114 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 C9JQL5 133 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 BPY2O14599 106 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 TRGC2P03986 189 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 SMIM6P0DI80 62 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 CKS2P33552 79 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 RPL28P46779 137 aaKnown RBP1.53□□□□□ -2.16
CDKL5-208ENST00000624953 UBE2AP49459 152 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 RPL39P62891 51 aaKnown RBP1.53□□□□□ -2.16
CDKL5-208ENST00000624953 PRLHP81277 87 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 PMCHL1Q16048 86 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 PCP2Q8IVA1 136 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 DAND5Q8N907 189 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 Q8NDZ9 215 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 C20orf78Q9BR46 151 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 TMEM191AQ9H0A3 160 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 CYSLTR1Q9Y271 337 aa1.53□□□□□ -2.16
CDKL5-208ENST00000624953 NEBP20929 6669 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 TRBV30A0A0K0K1B3 111 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 TSTD3H0UI37 97 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 M0R2T5 61 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 SEC11AP67812 179 aa1.52□□□□□ -2.17
CDKL5-208ENST00000624953 KRTAP6-3Q3LI67 103 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms