RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 HTN3P15516 51 aa5.86□□□□□ -1.47
VCL-207ENST00000624354 PDE6GP18545 87 aa5.86□□□□□ -1.47
VCL-207ENST00000624354 C9orf66Q5T8R8 295 aa5.86□□□□□ -1.47
VCL-207ENST00000624354 KLK12Q9UKR0 248 aa5.86□□□□□ -1.47
VCL-207ENST00000624354 ESRGQ1W209 222 aa5.85□□□□□ -1.47
VCL-207ENST00000624354 DIRC1Q969H9 104 aa5.85□□□□□ -1.47
VCL-207ENST00000624354 CELA1Q9UNI1 258 aa5.85□□□□□ -1.47
VCL-207ENST00000624354 BPY2O14599 106 aa5.84□□□□□ -1.47
VCL-207ENST00000624354 SPART-AS1P0CW21 52 aa5.84□□□□□ -1.47
VCL-207ENST00000624354 FUSP35637 526 aaKnown RBP eCLIP5.84□□□□□ -1.47
VCL-207ENST00000624354 PRR34Q9NV39 138 aa5.84□□□□□ -1.47
VCL-207ENST00000624354 GVQW2A0A096LPI5 108 aaPredicted RBP5.84□□□□□ -1.47
VCL-207ENST00000624354 ERC2-IT1O76042 136 aa5.84□□□□□ -1.48
VCL-207ENST00000624354 XAGE1AQ9HD64 81 aa5.84□□□□□ -1.48
VCL-207ENST00000624354 PRYO14603 147 aa5.83□□□□□ -1.48
VCL-207ENST00000624354 Q8NAQ8 132 aa5.83□□□□□ -1.48
VCL-207ENST00000624354 PMAIP1Q13794 54 aa5.82□□□□□ -1.48
VCL-207ENST00000624354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.82□□□□□ -1.48
VCL-207ENST00000624354 C6orf48Q9UBA6 75 aa5.82□□□□□ -1.48
VCL-207ENST00000624354 ZNF73O43830 326 aaPredicted RBP5.82□□□□□ -1.48
VCL-207ENST00000624354 TENM3Q9P273 2699 aa5.82□□□□□ -1.48
VCL-207ENST00000624354 COX7BP24311 80 aa5.82□□□□□ -1.48
VCL-207ENST00000624354 PRR15Q8IV56 129 aa5.8□□□□□ -1.48
VCL-207ENST00000624354 ELOF1P60002 83 aaKnown RBP5.8□□□□□ -1.48
VCL-207ENST00000624354 Q6ZTC4 211 aa5.8□□□□□ -1.48
VCL-207ENST00000624354 CAMK2N2Q96S95 79 aa5.8□□□□□ -1.48
VCL-207ENST00000624354 TGP01266 2768 aa5.79□□□□□ -1.48
VCL-207ENST00000624354 HIGD2BQ4VC39 106 aa5.79□□□□□ -1.48
VCL-207ENST00000624354 KRTAP24-1Q3LI83 254 aa5.78□□□□□ -1.48
VCL-207ENST00000624354 OXLD1Q5BKU9 147 aa5.78□□□□□ -1.48
VCL-207ENST00000624354 VPREB1P12018 145 aa5.78□□□□□ -1.48
VCL-207ENST00000624354 M0R378 163 aa5.77□□□□□ -1.48
VCL-207ENST00000624354 EGFEM1PQ0D2K5 195 aa5.77□□□□□ -1.48
VCL-207ENST00000624354 Q8N9L7 120 aa5.77□□□□□ -1.48
VCL-207ENST00000624354 HIGD2AQ9BW72 106 aa5.77□□□□□ -1.48
VCL-207ENST00000624354 OCR1Q9BZK8 76 aa5.77□□□□□ -1.49
VCL-207ENST00000624354 Q6ZRU5 148 aa5.77□□□□□ -1.49
VCL-207ENST00000624354 TENM2Q9NT68 2774 aa5.77□□□□□ -1.49
VCL-207ENST00000624354 LRCOL1A6NCL2 159 aa5.76□□□□□ -1.49
VCL-207ENST00000624354 WFDC10BQ8IUB3 73 aa5.76□□□□□ -1.49
VCL-207ENST00000624354 STAB2Q8WWQ8 2551 aa5.75□□□□□ -1.49
VCL-207ENST00000624354 hDV103S1A0JD37 113 aa5.75□□□□□ -1.49
VCL-207ENST00000624354 IGKV4-1P06312 121 aa5.75□□□□□ -1.49
VCL-207ENST00000624354 LINC00528Q8N1L1 170 aa5.74□□□□□ -1.49
VCL-207ENST00000624354 Q1T7F1 81 aa5.74□□□□□ -1.49
VCL-207ENST00000624354 KPRPQ5T749 579 aaPredicted RBP5.74□□□□□ -1.49
VCL-207ENST00000624354 KRTAP26-1Q6PEX3 210 aa5.73□□□□□ -1.49
VCL-207ENST00000624354 Q6ZRP5 223 aa5.73□□□□□ -1.49
VCL-207ENST00000624354 H3BNG1 76 aa5.73□□□□□ -1.49
VCL-207ENST00000624354 C15orf56Q8N910 161 aa5.73□□□□□ -1.49
VCL-207ENST00000624354 MDFIQ99750 246 aa5.73□□□□□ -1.49
VCL-207ENST00000624354 PSPHP1O15172 72 aa5.72□□□□□ -1.49
VCL-207ENST00000624354 C1orf64Q8NEQ6 169 aa5.71□□□□□ -1.5
VCL-207ENST00000624354 CD164Q04900 197 aa5.71□□□□□ -1.5
VCL-207ENST00000624354 FAM30AQ9NZY2 134 aa5.71□□□□□ -1.5
VCL-207ENST00000624354 ANK2Q01484 3957 aa5.7□□□□□ -1.5
VCL-207ENST00000624354 IGKV2D-24A0A075B6R9 120 aa5.7□□□□□ -1.5
VCL-207ENST00000624354 NKAPP1Q8N9T2 125 aa5.7□□□□□ -1.5
VCL-207ENST00000624354 CSMD3Q7Z407 3707 aa5.69□□□□□ -1.5
VCL-207ENST00000624354 SYCNQ0VAF6 134 aa5.69□□□□□ -1.5
VCL-207ENST00000624354 RETNQ9HD89 108 aa5.69□□□□□ -1.5
VCL-207ENST00000624354 TRAV22A0A0B4J277 110 aa5.69□□□□□ -1.5
VCL-207ENST00000624354 DEFB105AQ8NG35 78 aa5.69□□□□□ -1.5
VCL-207ENST00000624354 PRR4Q16378 134 aa5.68□□□□□ -1.5
VCL-207ENST00000624354 KCNQ1DNQ9H478 68 aa5.68□□□□□ -1.5
VCL-207ENST00000624354 C3orf84H3BNL1 204 aa5.68□□□□□ -1.5
VCL-207ENST00000624354 SMIM29Q86T20 159 aa5.68□□□□□ -1.5
VCL-207ENST00000624354 LINC01556Q5JQF7 62 aa5.67□□□□□ -1.5
VCL-207ENST00000624354 DNHD1Q96M86 4753 aa5.67□□□□□ -1.5
VCL-207ENST00000624354 C7orf33Q8WU49 177 aa5.67□□□□□ -1.5
VCL-207ENST00000624354 Q8N377 158 aa5.66□□□□□ -1.5
VCL-207ENST00000624354 SERTAD4-AS1Q5TG53 156 aa5.66□□□□□ -1.5
VCL-207ENST00000624354 IGLV5-48A0A075B6I7 105 aa5.65□□□□□ -1.5
VCL-207ENST00000624354 MRPL55Q7Z7F7 128 aaKnown RBP5.65□□□□□ -1.5
VCL-207ENST00000624354 DHRS4-AS1Q9P1J3 65 aa5.65□□□□□ -1.5
VCL-207ENST00000624354 LCE6AA0A183 80 aa5.65□□□□□ -1.51
VCL-207ENST00000624354 A8MUN3 132 aa5.64□□□□□ -1.51
VCL-207ENST00000624354 DEFB131BA0A096LNP1 70 aa5.64□□□□□ -1.51
VCL-207ENST00000624354 A0A1B0GW54 56 aa5.64□□□□□ -1.51
VCL-207ENST00000624354 PSCAO43653 123 aa5.63□□□□□ -1.51
VCL-207ENST00000624354 Q6ZRX8 168 aa5.63□□□□□ -1.51
VCL-207ENST00000624354 ZCCHC13Q8WW36 166 aaKnown RBP5.63□□□□□ -1.51
VCL-207ENST00000624354 COL7A1Q02388 2944 aa5.63□□□□□ -1.51
VCL-207ENST00000624354 ETDCA0A1B0GVM5 59 aa5.63□□□□□ -1.51
VCL-207ENST00000624354 UBE2BP63146 152 aa5.63□□□□□ -1.51
VCL-207ENST00000624354 CYP4F30PQ9H0H9 118 aa5.63□□□□□ -1.51
VCL-207ENST00000624354 RPL37AP8A6NKH3 93 aa5.63□□□□□ -1.51
VCL-207ENST00000624354 TLX1NBP0CAT3 122 aa5.63□□□□□ -1.51
VCL-207ENST00000624354 PLA2G2DQ9UNK4 145 aa5.62□□□□□ -1.51
VCL-207ENST00000624354 C1orf137Q5JT78 98 aa5.62□□□□□ -1.51
VCL-207ENST00000624354 C11orf45Q8TAV5 145 aa5.61□□□□□ -1.51
VCL-207ENST00000624354 SRRM2Q9UQ35 2752 aaKnown RBP5.61□□□□□ -1.51
VCL-207ENST00000624354 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.61□□□□□ -1.51
VCL-207ENST00000624354 A0A1W2PNM2 257 aa5.61□□□□□ -1.51
VCL-207ENST00000624354 DNAH10OSP0CZ25 163 aa5.61□□□□□ -1.51
VCL-207ENST00000624354 KRTAP10-11P60412 298 aa5.61□□□□□ -1.51
VCL-207ENST00000624354 Q9BRP9 147 aa5.61□□□□□ -1.51
VCL-207ENST00000624354 IGLV1-50A0A075B6I6 118 aa5.61□□□□□ -1.51
VCL-207ENST00000624354 A8MU10 97 aa5.6□□□□□ -1.51
VCL-207ENST00000624354 KRTAP4-16G5E9R7 235 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms