RNA–Protein interactions for RNA: ENST00000622972.3

LINC00963-215, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 444 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-215ENST00000622972 LINC00158P58513 81 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 HERV-K104P63124 156 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 COX17Q14061 63 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 MEIG1Q5JSS6 88 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 C2orf91Q6ZV80 131 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 KRTAP13-1Q8IUC0 172 aa3.54□□□□□ -1.84
LINC00963-215ENST00000622972 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.84
LINC00963-215ENST00000622972 TMEM238C9JI98 176 aa3.53□□□□□ -1.84
LINC00963-215ENST00000622972 NCR3O14931 201 aa3.53□□□□□ -1.84
LINC00963-215ENST00000622972 MRPL55Q7Z7F7 128 aaKnown RBP3.53□□□□□ -1.84
LINC00963-215ENST00000622972 LINC00308Q8TCZ7 52 aa3.53□□□□□ -1.84
LINC00963-215ENST00000622972 PAM16Q9Y3D7 125 aa3.53□□□□□ -1.84
LINC00963-215ENST00000622972 IGLV1-50A0A075B6I6 118 aa3.52□□□□□ -1.85
LINC00963-215ENST00000622972 KRTAP4-16G5E9R7 235 aaPredicted RBP3.52□□□□□ -1.85
LINC00963-215ENST00000622972 M0R378 163 aa3.52□□□□□ -1.85
LINC00963-215ENST00000622972 TIMM17BO60830 172 aa3.52□□□□□ -1.85
LINC00963-215ENST00000622972 COX8AP10176 69 aa3.52□□□□□ -1.85
LINC00963-215ENST00000622972 PRR4Q16378 134 aa3.52□□□□□ -1.85
LINC00963-215ENST00000622972 LBHQ53QV2 105 aaPredicted RBP3.52□□□□□ -1.85
LINC00963-215ENST00000622972 SFTA2Q6UW10 78 aa3.52□□□□□ -1.85
LINC00963-215ENST00000622972 BOD1L2Q8IYS8 172 aa3.52□□□□□ -1.85
LINC00963-215ENST00000622972 TRBV10-3A0A0K0K1G6 114 aa3.51□□□□□ -1.85
LINC00963-215ENST00000622972 KRTAP1-4P0C5Y4 121 aa3.51□□□□□ -1.85
LINC00963-215ENST00000622972 RPL13AP40429 203 aaKnown RBP3.51□□□□□ -1.85
LINC00963-215ENST00000622972 SPATA45Q537H7 98 aa3.51□□□□□ -1.85
LINC00963-215ENST00000622972 LINC00337Q8N6G1 96 aa3.51□□□□□ -1.85
LINC00963-215ENST00000622972 C14orf144Q96I85 54 aa3.51□□□□□ -1.85
LINC00963-215ENST00000622972 SPANXDQ9BXN6 97 aa3.51□□□□□ -1.85
LINC00963-215ENST00000622972 SPANXCQ9NY87 97 aa3.51□□□□□ -1.85
LINC00963-215ENST00000622972 IGLV6-57P01721 117 aa3.5□□□□□ -1.85
LINC00963-215ENST00000622972 IGKV2-30P06310 120 aa3.5□□□□□ -1.85
LINC00963-215ENST00000622972 SPRR1AP35321 89 aa3.5□□□□□ -1.85
LINC00963-215ENST00000622972 AKR1D1P51857 326 aa3.5□□□□□ -1.85
LINC00963-215ENST00000622972 MUSTN1Q8IVN3 82 aa3.5□□□□□ -1.85
LINC00963-215ENST00000622972 TMEM126AQ9H061 195 aa3.5□□□□□ -1.85
LINC00963-215ENST00000622972 ZNF861PO60384 105 aa3.49□□□□□ -1.85
LINC00963-215ENST00000622972 TSPAN13O95857 204 aa3.49□□□□□ -1.85
LINC00963-215ENST00000622972 RPL28P46779 137 aaKnown RBP3.49□□□□□ -1.85
LINC00963-215ENST00000622972 PRLHP81277 87 aa3.49□□□□□ -1.85
LINC00963-215ENST00000622972 NKAPP1Q8N9T2 125 aa3.49□□□□□ -1.85
LINC00963-215ENST00000622972 VAMP8Q9BV40 100 aa3.49□□□□□ -1.85
LINC00963-215ENST00000622972 SPANXB1Q9NS25 103 aaPredicted RBP3.49□□□□□ -1.85
LINC00963-215ENST00000622972 DLEU1O43261 78 aa3.48□□□□□ -1.85
LINC00963-215ENST00000622972 BCE1O60756 84 aa3.48□□□□□ -1.85
LINC00963-215ENST00000622972 NDUFC2O95298 119 aa3.48□□□□□ -1.85
LINC00963-215ENST00000622972 UBE2AP49459 152 aa3.48□□□□□ -1.85
LINC00963-215ENST00000622972 KCNQ1DNQ9H478 68 aa3.48□□□□□ -1.85
LINC00963-215ENST00000622972 TRBV10-2A0A0K0K1G8 114 aa3.47□□□□□ -1.85
LINC00963-215ENST00000622972 ERC2-IT1O76042 136 aa3.47□□□□□ -1.85
LINC00963-215ENST00000622972 RPL24P83731 157 aaKnown RBP3.47□□□□□ -1.85
LINC00963-215ENST00000622972 SCGB1D4Q6XE38 83 aa3.47□□□□□ -1.85
LINC00963-215ENST00000622972 TYMSOSQ8TAI1 123 aa3.47□□□□□ -1.85
LINC00963-215ENST00000622972 SMCR5Q8TEV8 140 aa3.47□□□□□ -1.85
LINC00963-215ENST00000622972 Q9BRP9 147 aa3.47□□□□□ -1.85
LINC00963-215ENST00000622972 PPDPFQ9H3Y8 114 aa3.47□□□□□ -1.85
LINC00963-215ENST00000622972 UBR4Q5T4S7 5183 aa3.46□□□□□ -1.85
LINC00963-215ENST00000622972 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 A4D1N5 150 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 LINC00587B1AMM8 73 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 HSBP1L1C9JCN9 74 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 CRYGAP11844 174 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 DDTP30046 118 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 FXYD2P54710 66 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 C12orf57Q99622 126 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 PRO1933Q9H354 126 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 ANAPC11Q9NYG5 84 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 HIGD1BQ9P298 99 aa3.46□□□□□ -1.86
LINC00963-215ENST00000622972 A0A087X002 238 aa3.45□□□□□ -1.86
LINC00963-215ENST00000622972 SMIM6P0DI80 62 aa3.45□□□□□ -1.86
LINC00963-215ENST00000622972 IFITM1P13164 125 aa3.45□□□□□ -1.86
LINC00963-215ENST00000622972 KRTAP13-2Q52LG2 175 aa3.45□□□□□ -1.86
LINC00963-215ENST00000622972 SLC25A34Q6PIV7 304 aa3.45□□□□□ -1.86
LINC00963-215ENST00000622972 TRAV23DV6A0A075B6W5 121 aa3.44□□□□□ -1.86
LINC00963-215ENST00000622972 A0A0U1RQV1 116 aa3.44□□□□□ -1.86
LINC00963-215ENST00000622972 Q6ZVH6 145 aa3.44□□□□□ -1.86
LINC00963-215ENST00000622972 FAM19A1Q7Z5A9 133 aa3.44□□□□□ -1.86
LINC00963-215ENST00000622972 MIEN1Q9BRT3 115 aa3.44□□□□□ -1.86
LINC00963-215ENST00000622972 K7ERJ3 54 aa3.43□□□□□ -1.86
LINC00963-215ENST00000622972 ZNF73O43830 326 aaPredicted RBP3.43□□□□□ -1.86
LINC00963-215ENST00000622972 CFC1BP0CG36 223 aa3.43□□□□□ -1.86
LINC00963-215ENST00000622972 CFC1P0CG37 223 aa3.43□□□□□ -1.86
LINC00963-215ENST00000622972 Q6ZRX8 168 aa3.43□□□□□ -1.86
LINC00963-215ENST00000622972 Q8N9P0 234 aaPredicted RBP3.43□□□□□ -1.86
LINC00963-215ENST00000622972 SMIM11BQ8TCY0 68 aa3.43□□□□□ -1.86
LINC00963-215ENST00000622972 LRP2P98164 4655 aa3.42□□□□□ -1.86
LINC00963-215ENST00000622972 C6orf99Q4VX62 202 aa3.42□□□□□ -1.86
LINC00963-215ENST00000622972 CEND1Q8N111 149 aa3.42□□□□□ -1.86
LINC00963-215ENST00000622972 LINC00304Q8N9R0 145 aa3.42□□□□□ -1.86
LINC00963-215ENST00000622972 ST20-AS1Q8NBB2 130 aa3.42□□□□□ -1.86
LINC00963-215ENST00000622972 SPRR4Q96PI1 79 aa3.42□□□□□ -1.86
LINC00963-215ENST00000622972 HIST1H4GQ99525 98 aa3.42□□□□□ -1.86
LINC00963-215ENST00000622972 RETNLBQ9BQ08 111 aa3.42□□□□□ -1.86
LINC00963-215ENST00000622972 HIGD2AQ9BW72 106 aa3.42□□□□□ -1.86
LINC00963-215ENST00000622972 LPAP08519 4548 aa3.42□□□□□ -1.86
LINC00963-215ENST00000622972 LINC01547P58512 204 aaPredicted RBP3.41□□□□□ -1.86
LINC00963-215ENST00000622972 ELOF1P60002 83 aaKnown RBP3.41□□□□□ -1.86
LINC00963-215ENST00000622972 S100A7L2Q5SY68 101 aa3.41□□□□□ -1.86
LINC00963-215ENST00000622972 LINC00518Q8N0U6 118 aa3.41□□□□□ -1.86
LINC00963-215ENST00000622972 C3orf22Q8N5N4 141 aa3.41□□□□□ -1.86
LINC00963-215ENST00000622972 OR13C6PQ8NH95 151 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms