RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 Q8IZM0 81 aa6.29□□□□□ -1.4
GGA3-222ENST00000621217 A0A087WZ39 114 aa6.28□□□□□ -1.4
GGA3-222ENST00000621217 IGLV5-39A0A0G2JS06 123 aa6.28□□□□□ -1.4
GGA3-222ENST00000621217 MUC7Q8TAX7 377 aa6.28□□□□□ -1.4
GGA3-222ENST00000621217 C19orf73Q9NVV2 129 aa6.28□□□□□ -1.4
GGA3-222ENST00000621217 IGHV3OR16-9A0A0B4J2B5 98 aa6.28□□□□□ -1.4
GGA3-222ENST00000621217 STAB2Q8WWQ8 2551 aa6.28□□□□□ -1.4
GGA3-222ENST00000621217 ZNF73O43830 326 aaPredicted RBP6.28□□□□□ -1.4
GGA3-222ENST00000621217 CD164L2Q6UWJ8 174 aa6.28□□□□□ -1.4
GGA3-222ENST00000621217 IGLV5-45A0A087WSX0 123 aa6.27□□□□□ -1.41
GGA3-222ENST00000621217 SMCR5Q8TEV8 140 aa6.27□□□□□ -1.41
GGA3-222ENST00000621217 LINC00208Q96KT6 92 aa6.27□□□□□ -1.41
GGA3-222ENST00000621217 CYSRT1A8MQ03 144 aa6.27□□□□□ -1.41
GGA3-222ENST00000621217 FAM218AQ96MZ4 157 aa6.27□□□□□ -1.41
GGA3-222ENST00000621217 LELP1Q5T871 98 aa6.26□□□□□ -1.41
GGA3-222ENST00000621217 FAM104AQ969W3 186 aa6.26□□□□□ -1.41
GGA3-222ENST00000621217 PDZD2O15018 2839 aa6.26□□□□□ -1.41
GGA3-222ENST00000621217 CSNK1G2-AS1Q8NCQ2 148 aa6.25□□□□□ -1.41
GGA3-222ENST00000621217 M0R378 163 aa6.25□□□□□ -1.41
GGA3-222ENST00000621217 Q8N9L7 120 aa6.25□□□□□ -1.41
GGA3-222ENST00000621217 KRTAP10-11P60412 298 aa6.25□□□□□ -1.41
GGA3-222ENST00000621217 LIMD2Q9BT23 127 aa6.25□□□□□ -1.41
GGA3-222ENST00000621217 IGKV2-28A0A075B6P5 120 aa6.24□□□□□ -1.41
GGA3-222ENST00000621217 TRAV10A0A0B4J240 114 aa6.24□□□□□ -1.41
GGA3-222ENST00000621217 IGKV2D-28P01615 120 aa6.24□□□□□ -1.41
GGA3-222ENST00000621217 LINC00575Q6W349 94 aa6.23□□□□□ -1.41
GGA3-222ENST00000621217 CASC2Q6XLA1 102 aa6.23□□□□□ -1.41
GGA3-222ENST00000621217 C10orf25Q5T742 122 aa6.23□□□□□ -1.41
GGA3-222ENST00000621217 LYPD5Q6UWN5 251 aa6.23□□□□□ -1.41
GGA3-222ENST00000621217 LINC01561Q8N1V8 128 aa6.23□□□□□ -1.41
GGA3-222ENST00000621217 Q8NAQ8 132 aa6.23□□□□□ -1.41
GGA3-222ENST00000621217 DHRS4-AS1Q9P1J3 65 aa6.22□□□□□ -1.41
GGA3-222ENST00000621217 HIGD2AQ9BW72 106 aa6.22□□□□□ -1.41
GGA3-222ENST00000621217 CD164Q04900 197 aa6.21□□□□□ -1.42
GGA3-222ENST00000621217 hDV103S1A0JD37 113 aa6.2□□□□□ -1.42
GGA3-222ENST00000621217 LINC00474Q9P2X8 69 aa6.2□□□□□ -1.42
GGA3-222ENST00000621217 B9D2Q9BPU9 175 aa6.19□□□□□ -1.42
GGA3-222ENST00000621217 A0A1B0GUV1 79 aa6.19□□□□□ -1.42
GGA3-222ENST00000621217 RPL37AP8A6NKH3 93 aa6.19□□□□□ -1.42
GGA3-222ENST00000621217 KLKP1Q107X0 134 aa6.19□□□□□ -1.42
GGA3-222ENST00000621217 C1orf137Q5JT78 98 aa6.19□□□□□ -1.42
GGA3-222ENST00000621217 TM2D3Q9BRN9 247 aa6.19□□□□□ -1.42
GGA3-222ENST00000621217 IL17DQ8TAD2 202 aa6.19□□□□□ -1.42
GGA3-222ENST00000621217 SYCNQ0VAF6 134 aa6.18□□□□□ -1.42
GGA3-222ENST00000621217 MDFIQ99750 246 aa6.18□□□□□ -1.42
GGA3-222ENST00000621217 LINC01600Q96MT4 127 aa6.18□□□□□ -1.42
GGA3-222ENST00000621217 A0A096LNI7 61 aa6.17□□□□□ -1.42
GGA3-222ENST00000621217 H7BZZ5 65 aa6.16□□□□□ -1.42
GGA3-222ENST00000621217 K7ERS5 55 aa6.16□□□□□ -1.42
GGA3-222ENST00000621217 Q6ZQT0 140 aa6.16□□□□□ -1.42
GGA3-222ENST00000621217 C2orf48Q96LS8 159 aa6.16□□□□□ -1.42
GGA3-222ENST00000621217 LY6G6CO95867 125 aa6.16□□□□□ -1.42
GGA3-222ENST00000621217 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.43
GGA3-222ENST00000621217 H0Y9P7 68 aa6.15□□□□□ -1.43
GGA3-222ENST00000621217 ERC2-IT1O76042 136 aa6.15□□□□□ -1.43
GGA3-222ENST00000621217 SMIM29Q86T20 159 aa6.15□□□□□ -1.43
GGA3-222ENST00000621217 K7EIL1 84 aa6.14□□□□□ -1.43
GGA3-222ENST00000621217 SERTAD4-AS1Q5TG53 156 aa6.14□□□□□ -1.43
GGA3-222ENST00000621217 Q6ZRU5 148 aa6.14□□□□□ -1.43
GGA3-222ENST00000621217 TENM3Q9P273 2699 aa6.14□□□□□ -1.43
GGA3-222ENST00000621217 C9orf129Q5T035 196 aaKnown RBP6.14□□□□□ -1.43
GGA3-222ENST00000621217 HCG22E2RYF7 251 aa6.14□□□□□ -1.43
GGA3-222ENST00000621217 VPREB1P12018 145 aa6.13□□□□□ -1.43
GGA3-222ENST00000621217 EGFEM1PQ0D2K5 195 aa6.12□□□□□ -1.43
GGA3-222ENST00000621217 C6orf48Q9UBA6 75 aa6.12□□□□□ -1.43
GGA3-222ENST00000621217 A8MUN3 132 aa6.11□□□□□ -1.43
GGA3-222ENST00000621217 PCOTHQ58A44 107 aa6.11□□□□□ -1.43
GGA3-222ENST00000621217 PKD1L1Q8TDX9 2849 aa6.11□□□□□ -1.43
GGA3-222ENST00000621217 C1orf64Q8NEQ6 169 aa6.09□□□□□ -1.43
GGA3-222ENST00000621217 ZNF469Q96JG9 3925 aaPredicted RBP6.08□□□□□ -1.44
GGA3-222ENST00000621217 A0A1B0GW54 56 aa6.08□□□□□ -1.44
GGA3-222ENST00000621217 KIAA0087Q14695 138 aa6.08□□□□□ -1.44
GGA3-222ENST00000621217 CYP4F30PQ9H0H9 118 aa6.08□□□□□ -1.44
GGA3-222ENST00000621217 LINC00588Q9Y4M8 146 aa6.08□□□□□ -1.44
GGA3-222ENST00000621217 A0A087WSZ3 146 aa6.07□□□□□ -1.44
GGA3-222ENST00000621217 DEFB116Q30KQ4 102 aa6.07□□□□□ -1.44
GGA3-222ENST00000621217 KTN1-AS1Q86SY8 53 aa6.06□□□□□ -1.44
GGA3-222ENST00000621217 TRRAPQ9Y4A5 3859 aa6.06□□□□□ -1.44
GGA3-222ENST00000621217 Q5XG85 94 aa6.06□□□□□ -1.44
GGA3-222ENST00000621217 H3BPC8 53 aa6.06□□□□□ -1.44
GGA3-222ENST00000621217 ATP11AUNQ6ZP68 121 aa6.05□□□□□ -1.44
GGA3-222ENST00000621217 LINC00612Q8N6U2 182 aa6.05□□□□□ -1.44
GGA3-222ENST00000621217 TRAV22A0A0B4J277 110 aa6.04□□□□□ -1.44
GGA3-222ENST00000621217 SPAG11AQ6PDA7 123 aa6.04□□□□□ -1.44
GGA3-222ENST00000621217 LINC01556Q5JQF7 62 aa6.04□□□□□ -1.44
GGA3-222ENST00000621217 PRR15Q8IV56 129 aa6.03□□□□□ -1.44
GGA3-222ENST00000621217 TENM2Q9NT68 2774 aa6.03□□□□□ -1.44
GGA3-222ENST00000621217 C8orf87E5RJ46 101 aa6.03□□□□□ -1.44
GGA3-222ENST00000621217 CASC10Q5T4H9 136 aa6.02□□□□□ -1.45
GGA3-222ENST00000621217 Q6ZRP5 223 aa6.02□□□□□ -1.45
GGA3-222ENST00000621217 CYSTM1Q9H1C7 97 aa6.02□□□□□ -1.45
GGA3-222ENST00000621217 FAM168BA1KXE4 195 aa6.02□□□□□ -1.45
GGA3-222ENST00000621217 Q8NDZ9 215 aa6.02□□□□□ -1.45
GGA3-222ENST00000621217 C14orf177Q52M58 125 aa6.01□□□□□ -1.45
GGA3-222ENST00000621217 SPINK6Q6UWN8 80 aa6.01□□□□□ -1.45
GGA3-222ENST00000621217 NUPR2A6NF83 97 aa6.01□□□□□ -1.45
GGA3-222ENST00000621217 ELOF1P60002 83 aaKnown RBP6.01□□□□□ -1.45
GGA3-222ENST00000621217 C7orf33Q8WU49 177 aa6.01□□□□□ -1.45
GGA3-222ENST00000621217 CHTF8P0CG12 524 aa6□□□□□ -1.45
GGA3-222ENST00000621217 LCA10Q71F78 164 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms