RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 TPRXLQ17RH7 258 aa11.72□□□□□ -0.53
SMC6-210ENST00000621152 Q9BRP9 147 aa11.72□□□□□ -0.53
SMC6-210ENST00000621152 Q6ZRX8 168 aa11.71□□□□□ -0.53
SMC6-210ENST00000621152 TRAV23DV6A0A075B6W5 121 aa11.69□□□□□ -0.54
SMC6-210ENST00000621152 PET117Q6UWS5 81 aa11.69□□□□□ -0.54
SMC6-210ENST00000621152 IGLV9-49A0A0B4J1Y8 123 aa11.68□□□□□ -0.54
SMC6-210ENST00000621152 LINC01545Q5VT33 79 aa11.68□□□□□ -0.54
SMC6-210ENST00000621152 SPINK1P00995 79 aa11.67□□□□□ -0.54
SMC6-210ENST00000621152 JOSD1Q15040 202 aaPredicted RBP11.67□□□□□ -0.54
SMC6-210ENST00000621152 ZNF73O43830 326 aaPredicted RBP11.66□□□□□ -0.54
SMC6-210ENST00000621152 MOBPQ13875 183 aa11.66□□□□□ -0.54
SMC6-210ENST00000621152 SSBP3-AS1Q7Z2R9 100 aa11.66□□□□□ -0.54
SMC6-210ENST00000621152 A0A0U1RQV1 116 aa11.65□□□□□ -0.54
SMC6-210ENST00000621152 LINC00308Q8TCZ7 52 aa11.65□□□□□ -0.54
SMC6-210ENST00000621152 LITAFQ99732 161 aa11.65□□□□□ -0.54
SMC6-210ENST00000621152 FP248Q71RG6 208 aaPredicted RBP11.64□□□□□ -0.55
SMC6-210ENST00000621152 OR13C6PQ8NH95 151 aa11.64□□□□□ -0.55
SMC6-210ENST00000621152 ZNF815PA8K554 130 aa11.63□□□□□ -0.55
SMC6-210ENST00000621152 TIMM17BO60830 172 aa11.63□□□□□ -0.55
SMC6-210ENST00000621152 C3orf79P0CE67 100 aa11.63□□□□□ -0.55
SMC6-210ENST00000621152 HINT1P49773 126 aaPredicted RBP11.63□□□□□ -0.55
SMC6-210ENST00000621152 CBY1Q9Y3M2 126 aa11.63□□□□□ -0.55
SMC6-210ENST00000621152 MUC2Q02817 5179 aa11.62□□□□□ -0.55
SMC6-210ENST00000621152 SPANXCQ9NY87 97 aa11.62□□□□□ -0.55
SMC6-210ENST00000621152 TTTY13Q9BZ97 58 aa11.61□□□□□ -0.55
SMC6-210ENST00000621152 KRTDAPP60985 99 aa11.6□□□□□ -0.55
SMC6-210ENST00000621152 ST20-AS1Q8NBB2 130 aa11.6□□□□□ -0.55
SMC6-210ENST00000621152 COA6Q5JTJ3 125 aaKnown RBP11.58□□□□□ -0.56
SMC6-210ENST00000621152 C9orf153Q5TBE3 101 aa11.56□□□□□ -0.56
SMC6-210ENST00000621152 C5orf52A6NGY3 159 aa11.55□□□□□ -0.56
SMC6-210ENST00000621152 LINC00518Q8N0U6 118 aa11.55□□□□□ -0.56
SMC6-210ENST00000621152 SPANXDQ9BXN6 97 aa11.55□□□□□ -0.56
SMC6-210ENST00000621152 RPS29P62273 56 aaKnown RBP11.54□□□□□ -0.56
SMC6-210ENST00000621152 KRTAP13-3Q3SY46 172 aa11.54□□□□□ -0.56
SMC6-210ENST00000621152 Q8N377 158 aa11.54□□□□□ -0.56
SMC6-210ENST00000621152 SLC25A20O43772 301 aa11.52□□□□□ -0.57
SMC6-210ENST00000621152 SCGB1D4Q6XE38 83 aa11.52□□□□□ -0.57
SMC6-210ENST00000621152 DHRS4-AS1Q9P1J3 65 aa11.52□□□□□ -0.57
SMC6-210ENST00000621152 C20orf202A1L168 122 aa11.51□□□□□ -0.57
SMC6-210ENST00000621152 ANKRD39Q53RE8 183 aa11.5□□□□□ -0.57
SMC6-210ENST00000621152 COX7BP24311 80 aa11.49□□□□□ -0.57
SMC6-210ENST00000621152 C6orf99Q4VX62 202 aa11.49□□□□□ -0.57
SMC6-210ENST00000621152 ATOH7Q8N100 152 aa11.49□□□□□ -0.57
SMC6-210ENST00000621152 MUC17Q685J3 4493 aa11.48□□□□□ -0.57
SMC6-210ENST00000621152 SPRR1BP22528 89 aa11.48□□□□□ -0.57
SMC6-210ENST00000621152 SLC25A34Q6PIV7 304 aa11.47□□□□□ -0.57
SMC6-210ENST00000621152 ELOF1P60002 83 aaKnown RBP11.46□□□□□ -0.57
SMC6-210ENST00000621152 LAMTOR3Q9UHA4 124 aa11.46□□□□□ -0.57
SMC6-210ENST00000621152 IFITM1P13164 125 aa11.45□□□□□ -0.58
SMC6-210ENST00000621152 TAL2Q16559 108 aa11.45□□□□□ -0.58
SMC6-210ENST00000621152 COPS9Q8WXC6 57 aa11.45□□□□□ -0.58
SMC6-210ENST00000621152 PCP2Q8IVA1 136 aa11.44□□□□□ -0.58
SMC6-210ENST00000621152 DEFB105AQ8NG35 78 aa11.44□□□□□ -0.58
SMC6-210ENST00000621152 A6NDN8 102 aa11.43□□□□□ -0.58
SMC6-210ENST00000621152 ASB16-AS1Q495Z4 193 aa11.43□□□□□ -0.58
SMC6-210ENST00000621152 MUSTN1Q8IVN3 82 aa11.43□□□□□ -0.58
SMC6-210ENST00000621152 HRCT1Q6UXD1 115 aa11.42□□□□□ -0.58
SMC6-210ENST00000621152 Q6ZVH6 145 aa11.42□□□□□ -0.58
SMC6-210ENST00000621152 TRBV7-6A0A0J9YX20 115 aa11.41□□□□□ -0.58
SMC6-210ENST00000621152 AKR1D1P51857 326 aa11.41□□□□□ -0.58
SMC6-210ENST00000621152 LCE2AQ5TA79 106 aaPredicted RBP11.41□□□□□ -0.58
SMC6-210ENST00000621152 SEC61BP60468 96 aaKnown RBP11.39□□□□□ -0.59
SMC6-210ENST00000621152 TEX49A0A1B0GTD5 131 aa11.38□□□□□ -0.59
SMC6-210ENST00000621152 Q1RN00 199 aa11.38□□□□□ -0.59
SMC6-210ENST00000621152 A0A1B0GWB2 263 aa11.37□□□□□ -0.59
SMC6-210ENST00000621152 SNRPEP62304 92 aaKnown RBP11.37□□□□□ -0.59
SMC6-210ENST00000621152 LIMD2Q9BT23 127 aa11.36□□□□□ -0.59
SMC6-210ENST00000621152 PRO1933Q9H354 126 aa11.34□□□□□ -0.59
SMC6-210ENST00000621152 FAT4Q6V0I7 4981 aa11.34□□□□□ -0.59
SMC6-210ENST00000621152 S100A2P29034 98 aa11.33□□□□□ -0.6
SMC6-210ENST00000621152 TRAV13-2A0A0B4J235 113 aa11.32□□□□□ -0.6
SMC6-210ENST00000621152 XP32Q5T750 250 aa11.32□□□□□ -0.6
SMC6-210ENST00000621152 SMIM29Q86T20 159 aa11.32□□□□□ -0.6
SMC6-210ENST00000621152 HIST3H2BBQ8N257 126 aa11.32□□□□□ -0.6
SMC6-210ENST00000621152 KRTAP4-1Q9BYQ7 146 aa11.32□□□□□ -0.6
SMC6-210ENST00000621152 A4D1N5 150 aa11.31□□□□□ -0.6
SMC6-210ENST00000621152 CD164Q04900 197 aa11.31□□□□□ -0.6
SMC6-210ENST00000621152 SMIM11BQ8TCY0 68 aa11.31□□□□□ -0.6
SMC6-210ENST00000621152 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
SMC6-210ENST00000621152 LINC01547P58512 204 aaPredicted RBP11.3□□□□□ -0.6
SMC6-210ENST00000621152 IGLV5-48A0A075B6I7 105 aa11.29□□□□□ -0.6
SMC6-210ENST00000621152 HSBP1L1C9JCN9 74 aa11.28□□□□□ -0.6
SMC6-210ENST00000621152 H7C2G1 150 aa11.28□□□□□ -0.6
SMC6-210ENST00000621152 NHP2Q9NX24 153 aaKnown RBP11.27□□□□□ -0.61
SMC6-210ENST00000621152 A0A0G2JQZ4 141 aa11.25□□□□□ -0.61
SMC6-210ENST00000621152 VAMP3Q15836 100 aa11.25□□□□□ -0.61
SMC6-210ENST00000621152 C9orf92A6NGG3 77 aa11.24□□□□□ -0.61
SMC6-210ENST00000621152 S100A6P06703 90 aa11.23□□□□□ -0.61
SMC6-210ENST00000621152 KRTAP9-2Q9BYQ4 174 aa11.23□□□□□ -0.61
SMC6-210ENST00000621152 Q5XG85 94 aa11.2□□□□□ -0.62
SMC6-210ENST00000621152 LINC00575Q6W349 94 aa11.19□□□□□ -0.62
SMC6-210ENST00000621152 SCGB1D1O95968 90 aa11.18□□□□□ -0.62
SMC6-210ENST00000621152 C1orf195Q5TG92 126 aa11.18□□□□□ -0.62
SMC6-210ENST00000621152 PCOTHQ58A44 107 aa11.16□□□□□ -0.62
SMC6-210ENST00000621152 TMA7Q9Y2S6 64 aaKnown RBP11.16□□□□□ -0.62
SMC6-210ENST00000621152 hADV29S1A0JD25 119 aa11.15□□□□□ -0.62
SMC6-210ENST00000621152 F8WEM9 126 aa11.14□□□□□ -0.63
SMC6-210ENST00000621152 HIST1H4GQ99525 98 aa11.14□□□□□ -0.63
SMC6-210ENST00000621152 Q6ZQY7 126 aa11.13□□□□□ -0.63
SMC6-210ENST00000621152 C12orf57Q99622 126 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms