RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 C15orf56Q8N910 161 aa10.59□□□□□ -0.71
DKC1-213ENST00000620277 SERTAD4-AS1Q5TG53 156 aa10.59□□□□□ -0.71
DKC1-213ENST00000620277 FAM236DA0A1B0GTK5 79 aa10.58□□□□□ -0.72
DKC1-213ENST00000620277 FAM236CP0DP71 79 aa10.58□□□□□ -0.72
DKC1-213ENST00000620277 NKAPP1Q8N9T2 125 aa10.58□□□□□ -0.72
DKC1-213ENST00000620277 LOC110117498A0A087WWA1 95 aa10.57□□□□□ -0.72
DKC1-213ENST00000620277 ELOF1P60002 83 aaKnown RBP10.57□□□□□ -0.72
DKC1-213ENST00000620277 MRAPQ8TCY5 172 aa10.57□□□□□ -0.72
DKC1-213ENST00000620277 CASC10Q5T4H9 136 aa10.57□□□□□ -0.72
DKC1-213ENST00000620277 NREPQ16612 68 aa10.56□□□□□ -0.72
DKC1-213ENST00000620277 COL7A1Q02388 2944 aa10.56□□□□□ -0.72
DKC1-213ENST00000620277 M0R378 163 aa10.55□□□□□ -0.72
DKC1-213ENST00000620277 NDUFC2-KCTD14E9PQ53 114 aa10.55□□□□□ -0.72
DKC1-213ENST00000620277 H7BZZ5 65 aa10.55□□□□□ -0.72
DKC1-213ENST00000620277 KRTAP10-11P60412 298 aa10.55□□□□□ -0.72
DKC1-213ENST00000620277 STAB2Q8WWQ8 2551 aa10.54□□□□□ -0.72
DKC1-213ENST00000620277 TRAV7A0A075B6U4 112 aa10.54□□□□□ -0.72
DKC1-213ENST00000620277 ST20-AS1Q8NBB2 130 aa10.54□□□□□ -0.72
DKC1-213ENST00000620277 DEFB131BA0A096LNP1 70 aa10.54□□□□□ -0.72
DKC1-213ENST00000620277 SYCNQ0VAF6 134 aa10.53□□□□□ -0.72
DKC1-213ENST00000620277 TRBV7-4A0A0J9YYF1 115 aa10.52□□□□□ -0.72
DKC1-213ENST00000620277 DEFB116Q30KQ4 102 aa10.52□□□□□ -0.72
DKC1-213ENST00000620277 EGFEM1PQ0D2K5 195 aa10.52□□□□□ -0.73
DKC1-213ENST00000620277 LINC00528Q8N1L1 170 aa10.52□□□□□ -0.73
DKC1-213ENST00000620277 C7orf33Q8WU49 177 aa10.51□□□□□ -0.73
DKC1-213ENST00000620277 LINC00474Q9P2X8 69 aa10.51□□□□□ -0.73
DKC1-213ENST00000620277 RPS28P62857 69 aaKnown RBP10.5□□□□□ -0.73
DKC1-213ENST00000620277 LRCOL1A6NCL2 159 aa10.49□□□□□ -0.73
DKC1-213ENST00000620277 C5orf47Q569G3 176 aa10.49□□□□□ -0.73
DKC1-213ENST00000620277 Q5XG85 94 aa10.49□□□□□ -0.73
DKC1-213ENST00000620277 FAM30AQ9NZY2 134 aa10.49□□□□□ -0.73
DKC1-213ENST00000620277 GVQW2A0A096LPI5 108 aaPredicted RBP10.49□□□□□ -0.73
DKC1-213ENST00000620277 KRTAP26-1Q6PEX3 210 aa10.49□□□□□ -0.73
DKC1-213ENST00000620277 MPLKIPQ8TAP9 179 aa10.47□□□□□ -0.73
DKC1-213ENST00000620277 C11orf45Q8TAV5 145 aa10.47□□□□□ -0.73
DKC1-213ENST00000620277 Q8N377 158 aa10.47□□□□□ -0.73
DKC1-213ENST00000620277 PDE6GP18545 87 aa10.46□□□□□ -0.73
DKC1-213ENST00000620277 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
DKC1-213ENST00000620277 UBE2BP63146 152 aa10.45□□□□□ -0.74
DKC1-213ENST00000620277 CXCL6P80162 114 aa10.45□□□□□ -0.74
DKC1-213ENST00000620277 PRR4Q16378 134 aa10.45□□□□□ -0.74
DKC1-213ENST00000620277 HIGD2AQ9BW72 106 aa10.45□□□□□ -0.74
DKC1-213ENST00000620277 ERC2-IT1O76042 136 aa10.44□□□□□ -0.74
DKC1-213ENST00000620277 ETDCA0A1B0GVM5 59 aa10.44□□□□□ -0.74
DKC1-213ENST00000620277 TMEM254Q8TBM7 123 aa10.43□□□□□ -0.74
DKC1-213ENST00000620277 IGKV4-1P06312 121 aa10.42□□□□□ -0.74
DKC1-213ENST00000620277 LYSTQ99698 3801 aa10.41□□□□□ -0.74
DKC1-213ENST00000620277 SMIM29Q86T20 159 aa10.41□□□□□ -0.74
DKC1-213ENST00000620277 Q9BRP9 147 aa10.4□□□□□ -0.74
DKC1-213ENST00000620277 A0A096LNI7 61 aa10.39□□□□□ -0.75
DKC1-213ENST00000620277 KLKP1Q107X0 134 aa10.39□□□□□ -0.75
DKC1-213ENST00000620277 C1orf137Q5JT78 98 aa10.38□□□□□ -0.75
DKC1-213ENST00000620277 TRBV7-6A0A0J9YX20 115 aa10.37□□□□□ -0.75
DKC1-213ENST00000620277 A0A1W2PNM2 257 aa10.37□□□□□ -0.75
DKC1-213ENST00000620277 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
DKC1-213ENST00000620277 FAM229BQ4G0N7 80 aa10.37□□□□□ -0.75
DKC1-213ENST00000620277 FUSP35637 526 aaKnown RBP eCLIP10.37□□□□□ -0.754e-6■■■□□ 14.6
DKC1-213ENST00000620277 LINC00336Q6ZUF6 198 aa10.37□□□□□ -0.75
DKC1-213ENST00000620277 PRLHP81277 87 aa10.36□□□□□ -0.75
DKC1-213ENST00000620277 SERP1Q9Y6X1 66 aa10.36□□□□□ -0.75
DKC1-213ENST00000620277 DNAH10Q8IVF4 4471 aa10.35□□□□□ -0.75
DKC1-213ENST00000620277 LINC00588Q9Y4M8 146 aa10.35□□□□□ -0.75
DKC1-213ENST00000620277 LINC01556Q5JQF7 62 aa10.35□□□□□ -0.75
DKC1-213ENST00000620277 FP248Q71RG6 208 aaPredicted RBP10.35□□□□□ -0.75
DKC1-213ENST00000620277 KCNQ1DNQ9H478 68 aa10.34□□□□□ -0.75
DKC1-213ENST00000620277 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
DKC1-213ENST00000620277 Q6ZRX8 168 aa10.32□□□□□ -0.76
DKC1-213ENST00000620277 WFDC13Q8IUB5 93 aa10.32□□□□□ -0.76
DKC1-213ENST00000620277 K7EQZ3 153 aa10.32□□□□□ -0.76
DKC1-213ENST00000620277 A0A0U1RQV1 116 aa10.31□□□□□ -0.76
DKC1-213ENST00000620277 H3BQ85 93 aa10.3□□□□□ -0.76
DKC1-213ENST00000620277 PRYO14603 147 aa10.3□□□□□ -0.76
DKC1-213ENST00000620277 PKIGQ9Y2B9 76 aa10.3□□□□□ -0.76
DKC1-213ENST00000620277 RPL37AP61513 92 aaKnown RBP10.3□□□□□ -0.76
DKC1-213ENST00000620277 KRTAP24-1Q3LI83 254 aa10.3□□□□□ -0.76
DKC1-213ENST00000620277 IGLV1-50A0A075B6I6 118 aa10.29□□□□□ -0.76
DKC1-213ENST00000620277 MRPL55Q7Z7F7 128 aaKnown RBP10.29□□□□□ -0.76
DKC1-213ENST00000620277 BRK1Q8WUW1 75 aa10.29□□□□□ -0.76
DKC1-213ENST00000620277 OCR1Q9BZK8 76 aa10.29□□□□□ -0.76
DKC1-213ENST00000620277 EPM2AB3EWF7 344 aa10.27□□□□□ -0.76
DKC1-213ENST00000620277 CHTF8P0CG12 524 aa10.27□□□□□ -0.77
DKC1-213ENST00000620277 DHRS4-AS1Q9P1J3 65 aa10.25□□□□□ -0.77
DKC1-213ENST00000620277 PSCAO43653 123 aa10.24□□□□□ -0.77
DKC1-213ENST00000620277 A0A087WSZ3 146 aa10.24□□□□□ -0.77
DKC1-213ENST00000620277 SMIM26A0A096LP01 95 aa10.24□□□□□ -0.77
DKC1-213ENST00000620277 H3BNG1 76 aa10.24□□□□□ -0.77
DKC1-213ENST00000620277 LINC00476Q8WZB0 136 aa10.23□□□□□ -0.77
DKC1-213ENST00000620277 IGLV5-48A0A075B6I7 105 aa10.23□□□□□ -0.77
DKC1-213ENST00000620277 DSCR10P59022 87 aa10.22□□□□□ -0.77
DKC1-213ENST00000620277 DNAH10OSP0CZ25 163 aa10.22□□□□□ -0.77
DKC1-213ENST00000620277 Q8NBF4 154 aa10.22□□□□□ -0.77
DKC1-213ENST00000620277 BCE1O60756 84 aa10.21□□□□□ -0.77
DKC1-213ENST00000620277 REG3GQ6UW15 175 aa10.21□□□□□ -0.78
DKC1-213ENST00000620277 KRTAP4-16G5E9R7 235 aaPredicted RBP10.19□□□□□ -0.78
DKC1-213ENST00000620277 NDUFC1O43677 76 aa10.18□□□□□ -0.78
DKC1-213ENST00000620277 KRTAP1-5Q9BYS1 174 aa10.18□□□□□ -0.78
DKC1-213ENST00000620277 PHF5AQ7RTV0 110 aaKnown RBP10.17□□□□□ -0.78
DKC1-213ENST00000620277 IGFL1Q6UW32 110 aa10.17□□□□□ -0.78
DKC1-213ENST00000620277 WIPF1O43516 503 aa10.16□□□□□ -0.78
DKC1-213ENST00000620277 KRTAP11-1Q8IUC1 163 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms