RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 PRO0628Q9UI54 55 aa13.31□□□□□ -0.28
FGFR1-241ENST00000619564 EPG5Q9HCE0 2579 aa13.3□□□□□ -0.28
FGFR1-241ENST00000619564 C9orf163Q8N9P6 203 aa13.29□□□□□ -0.28
FGFR1-241ENST00000619564 DSCR10P59022 87 aa13.29□□□□□ -0.28
FGFR1-241ENST00000619564 C9orf129Q5T035 196 aaKnown RBP13.28□□□□□ -0.28
FGFR1-241ENST00000619564 SMR3BP02814 79 aaPredicted RBP13.26□□□□□ -0.29
FGFR1-241ENST00000619564 TLX1NBP0CAT3 122 aa13.26□□□□□ -0.29
FGFR1-241ENST00000619564 LINC00336Q6ZUF6 198 aa13.26□□□□□ -0.29
FGFR1-241ENST00000619564 C8orf17Q9NRJ1 99 aa13.25□□□□□ -0.29
FGFR1-241ENST00000619564 PLA2G2DQ9UNK4 145 aa13.24□□□□□ -0.29
FGFR1-241ENST00000619564 RPS28P62857 69 aaKnown RBP13.23□□□□□ -0.29
FGFR1-241ENST00000619564 OBSCN-AS1Q96MR7 158 aa13.23□□□□□ -0.29
FGFR1-241ENST00000619564 PRR15Q8IV56 129 aa13.22□□□□□ -0.29
FGFR1-241ENST00000619564 C9orf92A6NGG3 77 aa13.22□□□□□ -0.29
FGFR1-241ENST00000619564 A0A1B0GVX0 72 aa13.21□□□□□ -0.29
FGFR1-241ENST00000619564 ERC2-IT1O76042 136 aa13.2□□□□□ -0.3
FGFR1-241ENST00000619564 APLNQ9ULZ1 77 aa13.2□□□□□ -0.3
FGFR1-241ENST00000619564 Q8N377 158 aa13.19□□□□□ -0.3
FGFR1-241ENST00000619564 IGLV7-43P04211 117 aa13.19□□□□□ -0.3
FGFR1-241ENST00000619564 LINC01600Q96MT4 127 aa13.19□□□□□ -0.3
FGFR1-241ENST00000619564 EIF4EBP3O60516 100 aaPredicted RBP13.17□□□□□ -0.3
FGFR1-241ENST00000619564 COA5Q86WW8 74 aa13.17□□□□□ -0.3
FGFR1-241ENST00000619564 KRTAP1-3Q8IUG1 177 aa13.16□□□□□ -0.3
FGFR1-241ENST00000619564 ZNF575Q86XF7 245 aa13.14□□□□□ -0.31
FGFR1-241ENST00000619564 PSORS1C2Q9UIG4 136 aa13.14□□□□□ -0.31
FGFR1-241ENST00000619564 CNBPP62633 177 aaKnown RBP13.13□□□□□ -0.31
FGFR1-241ENST00000619564 A0A1W2PNN7 141 aa13.13□□□□□ -0.31
FGFR1-241ENST00000619564 ANAPC11Q9NYG5 84 aa13.13□□□□□ -0.31
FGFR1-241ENST00000619564 FLNBO75369 2602 aaKnown RBP13.12□□□□□ -0.31
FGFR1-241ENST00000619564 KRTAP1-1Q07627 177 aa13.1□□□□□ -0.31
FGFR1-241ENST00000619564 CASC10Q5T4H9 136 aa13.09□□□□□ -0.31
FGFR1-241ENST00000619564 A0A0G2JQZ4 141 aa13.09□□□□□ -0.31
FGFR1-241ENST00000619564 SPRR4Q96PI1 79 aa13.09□□□□□ -0.31
FGFR1-241ENST00000619564 UQCR11O14957 56 aa13.08□□□□□ -0.32
FGFR1-241ENST00000619564 HECTD1Q9ULT8 2610 aa13.07□□□□□ -0.32
FGFR1-241ENST00000619564 IGLV5-37A0A075B6J1 123 aa13.06□□□□□ -0.32
FGFR1-241ENST00000619564 RBM12B-AS1Q9P1G2 102 aa13.05□□□□□ -0.32
FGFR1-241ENST00000619564 CYP4F30PQ9H0H9 118 aa13.02□□□□□ -0.33
FGFR1-241ENST00000619564 SPINT4Q6UDR6 99 aa13.02□□□□□ -0.33
FGFR1-241ENST00000619564 MGAM2Q2M2H8 2515 aa13.01□□□□□ -0.33
FGFR1-241ENST00000619564 A8MUN3 132 aa13□□□□□ -0.33
FGFR1-241ENST00000619564 USP24Q9UPU5 2620 aa12.97□□□□□ -0.33
FGFR1-241ENST00000619564 KLKP1Q107X0 134 aa12.93□□□□□ -0.34
FGFR1-241ENST00000619564 MIR22HGQ0VDD5 57 aa12.93□□□□□ -0.34
FGFR1-241ENST00000619564 CRIPTQ9P021 101 aa12.92□□□□□ -0.34
FGFR1-241ENST00000619564 A0A1W2PNM2 257 aa12.92□□□□□ -0.34
FGFR1-241ENST00000619564 TNP2Q05952 138 aa12.9□□□□□ -0.34
FGFR1-241ENST00000619564 UTRNP46939 3433 aa12.88□□□□□ -0.35
FGFR1-241ENST00000619564 IGLV5-48A0A075B6I7 105 aa12.82□□□□□ -0.36
FGFR1-241ENST00000619564 Q8N1X5 172 aa12.81□□□□□ -0.36
FGFR1-241ENST00000619564 LINC01554Q52M75 96 aa12.81□□□□□ -0.36
FGFR1-241ENST00000619564 FAM104AQ969W3 186 aa12.81□□□□□ -0.36
FGFR1-241ENST00000619564 CD164Q04900 197 aa12.8□□□□□ -0.36
FGFR1-241ENST00000619564 Q6ZSA8 131 aa12.78□□□□□ -0.36
FGFR1-241ENST00000619564 H7BZZ5 65 aa12.75□□□□□ -0.37
FGFR1-241ENST00000619564 SPANXA2-OT1Q8N9U9 137 aa12.74□□□□□ -0.37
FGFR1-241ENST00000619564 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.74□□□□□ -0.37
FGFR1-241ENST00000619564 IGLV7-46A0A075B6I9 117 aa12.74□□□□□ -0.37
FGFR1-241ENST00000619564 WIPF1O43516 503 aa12.72□□□□□ -0.37
FGFR1-241ENST00000619564 PRR26Q8N8Z3 221 aa12.72□□□□□ -0.37
FGFR1-241ENST00000619564 A0A0D9SG42 100 aa12.71□□□□□ -0.37
FGFR1-241ENST00000619564 FLNAP21333 2647 aaKnown RBP12.68□□□□□ -0.38
FGFR1-241ENST00000619564 CDC42SE1Q9NRR8 79 aa12.66□□□□□ -0.38
FGFR1-241ENST00000619564 FAM229BQ4G0N7 80 aa12.66□□□□□ -0.38
FGFR1-241ENST00000619564 DNAH12Q6ZR08 3092 aa12.65□□□□□ -0.38
FGFR1-241ENST00000619564 PRRC2CQ9Y520 2896 aaKnown RBP12.65□□□□□ -0.38
FGFR1-241ENST00000619564 ATRQ13535 2644 aa12.63□□□□□ -0.39
FGFR1-241ENST00000619564 MAST4O15021 2626 aa12.63□□□□□ -0.39
FGFR1-241ENST00000619564 HELZ2Q9BYK8 2649 aaKnown RBP12.61□□□□□ -0.39
FGFR1-241ENST00000619564 ITPR3Q14573 2671 aa12.61□□□□□ -0.39
FGFR1-241ENST00000619564 PLAC8Q9NZF1 115 aa12.6□□□□□ -0.39
FGFR1-241ENST00000619564 BPTFQ12830 3046 aa12.6□□□□□ -0.39
FGFR1-241ENST00000619564 M0R2T5 61 aa12.56□□□□□ -0.4
FGFR1-241ENST00000619564 OCR1Q9BZK8 76 aa12.53□□□□□ -0.4
FGFR1-241ENST00000619564 CR1P17927 2039 aa12.53□□□□□ -0.4
FGFR1-241ENST00000619564 CAMK2N1Q7Z7J9 78 aa12.48□□□□□ -0.41
FGFR1-241ENST00000619564 HRES1P13985 223 aa12.47□□□□□ -0.41
FGFR1-241ENST00000619564 CEP350Q5VT06 3117 aa12.47□□□□□ -0.41
FGFR1-241ENST00000619564 ZCCHC13Q8WW36 166 aaKnown RBP12.45□□□□□ -0.42
FGFR1-241ENST00000619564 SPRR1AP35321 89 aa12.43□□□□□ -0.42
FGFR1-241ENST00000619564 KTN1-AS1Q86SY8 53 aa12.43□□□□□ -0.42
FGFR1-241ENST00000619564 A0A1B0GU33 70 aa12.41□□□□□ -0.42
FGFR1-241ENST00000619564 MMP24-AS1A0A0U1RRL7 71 aa12.39□□□□□ -0.43
FGFR1-241ENST00000619564 LCA10Q71F78 164 aa12.39□□□□□ -0.43
FGFR1-241ENST00000619564 CFAP46Q8IYW2 2715 aa12.39□□□□□ -0.43
FGFR1-241ENST00000619564 CSAG1Q6PB30 78 aa12.38□□□□□ -0.43
FGFR1-241ENST00000619564 Q8NDZ9 215 aa12.34□□□□□ -0.43
FGFR1-241ENST00000619564 SPRR1BP22528 89 aa12.33□□□□□ -0.44
FGFR1-241ENST00000619564 Q1T7F1 81 aa12.33□□□□□ -0.44
FGFR1-241ENST00000619564 S4R3F8 94 aa12.33□□□□□ -0.44
FGFR1-241ENST00000619564 Q5VSD8 79 aa12.32□□□□□ -0.44
FGFR1-241ENST00000619564 PCNTO95613 3336 aa12.31□□□□□ -0.44
FGFR1-241ENST00000619564 KRTAP1-5Q9BYS1 174 aa12.31□□□□□ -0.44
FGFR1-241ENST00000619564 LCE6AA0A183 80 aa12.3□□□□□ -0.44
FGFR1-241ENST00000619564 Q8N9P0 234 aaPredicted RBP12.3□□□□□ -0.44
FGFR1-241ENST00000619564 LUZP6Q538Z0 58 aa12.29□□□□□ -0.44
FGFR1-241ENST00000619564 STAB1Q9NY15 2570 aa12.29□□□□□ -0.44
FGFR1-241ENST00000619564 SEC61BP60468 96 aaKnown RBP12.29□□□□□ -0.44
FGFR1-241ENST00000619564 LINC00483Q53H64 154 aa12.26□□□□□ -0.45
FGFR1-241ENST00000619564 Q5W150 140 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms