RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.7□□□□□ -0.7
SEMA3B-214ENST00000619119 Q8NDZ9 215 aa10.7□□□□□ -0.7
SEMA3B-214ENST00000619119 PDE6GP18545 87 aa10.69□□□□□ -0.7
SEMA3B-214ENST00000619119 C9orf116Q5BN46 136 aaPredicted RBP10.69□□□□□ -0.7
SEMA3B-214ENST00000619119 FAM30AQ9NZY2 134 aa10.69□□□□□ -0.7
SEMA3B-214ENST00000619119 A8MUN3 132 aa10.68□□□□□ -0.7
SEMA3B-214ENST00000619119 IGKV4-1P06312 121 aa10.68□□□□□ -0.7
SEMA3B-214ENST00000619119 RBM12B-AS1Q9P1G2 102 aa10.67□□□□□ -0.7
SEMA3B-214ENST00000619119 A0A096LPF7 62 aa10.67□□□□□ -0.7
SEMA3B-214ENST00000619119 NOTCH1P46531 2555 aa10.66□□□□□ -0.7
SEMA3B-214ENST00000619119 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.71
SEMA3B-214ENST00000619119 IGHV4-30-4P0DP06 118 aa10.65□□□□□ -0.71
SEMA3B-214ENST00000619119 APOC4P55056 127 aa10.64□□□□□ -0.71
SEMA3B-214ENST00000619119 C10orf25Q5T742 122 aa10.63□□□□□ -0.71
SEMA3B-214ENST00000619119 IGHV4-28A0A0C4DH34 117 aa10.63□□□□□ -0.71
SEMA3B-214ENST00000619119 GYPEP15421 78 aa10.62□□□□□ -0.71
SEMA3B-214ENST00000619119 SPTSSBQ8NFR3 76 aa10.62□□□□□ -0.71
SEMA3B-214ENST00000619119 SYCNQ0VAF6 134 aa10.61□□□□□ -0.71
SEMA3B-214ENST00000619119 Q8IZM0 81 aa10.61□□□□□ -0.71
SEMA3B-214ENST00000619119 ANK2Q01484 3957 aa10.61□□□□□ -0.71
SEMA3B-214ENST00000619119 SMIM29Q86T20 159 aa10.61□□□□□ -0.71
SEMA3B-214ENST00000619119 HTN3P15516 51 aa10.61□□□□□ -0.71
SEMA3B-214ENST00000619119 LINC00612Q8N6U2 182 aa10.61□□□□□ -0.71
SEMA3B-214ENST00000619119 LINC00269Q8N2A0 174 aa10.6□□□□□ -0.71
SEMA3B-214ENST00000619119 C3orf84H3BNL1 204 aa10.59□□□□□ -0.71
SEMA3B-214ENST00000619119 KTN1-AS1Q86SY8 53 aa10.59□□□□□ -0.71
SEMA3B-214ENST00000619119 TRBV6-8A0A0A6YYG3 113 aa10.59□□□□□ -0.71
SEMA3B-214ENST00000619119 KRTAP10-11P60412 298 aa10.59□□□□□ -0.71
SEMA3B-214ENST00000619119 KLK12Q9UKR0 248 aa10.58□□□□□ -0.72
SEMA3B-214ENST00000619119 UBE2BP63146 152 aa10.57□□□□□ -0.72
SEMA3B-214ENST00000619119 COX7BP24311 80 aa10.57□□□□□ -0.72
SEMA3B-214ENST00000619119 PRO0255Q9UI72 69 aa10.56□□□□□ -0.72
SEMA3B-214ENST00000619119 Q8NAQ8 132 aa10.56□□□□□ -0.72
SEMA3B-214ENST00000619119 LINC00588Q9Y4M8 146 aa10.56□□□□□ -0.72
SEMA3B-214ENST00000619119 PSCAO43653 123 aa10.55□□□□□ -0.72
SEMA3B-214ENST00000619119 LYRM9A8MSI8 78 aa10.55□□□□□ -0.72
SEMA3B-214ENST00000619119 CHKB-CPT1BH3BT56 60 aa10.55□□□□□ -0.72
SEMA3B-214ENST00000619119 DIRC1Q969H9 104 aa10.54□□□□□ -0.72
SEMA3B-214ENST00000619119 IGLV10-54A0A075B6I4 117 aa10.54□□□□□ -0.72
SEMA3B-214ENST00000619119 Q5VV11 94 aa10.54□□□□□ -0.72
SEMA3B-214ENST00000619119 CMYA5Q8N3K9 4069 aa10.52□□□□□ -0.72
SEMA3B-214ENST00000619119 TENM3Q9P273 2699 aa10.52□□□□□ -0.72
SEMA3B-214ENST00000619119 NBEAL1Q6ZS30 2694 aa10.52□□□□□ -0.73
SEMA3B-214ENST00000619119 M0R378 163 aa10.51□□□□□ -0.73
SEMA3B-214ENST00000619119 KIAA0087Q14695 138 aa10.51□□□□□ -0.73
SEMA3B-214ENST00000619119 C16orf90A8MZG2 172 aa10.51□□□□□ -0.73
SEMA3B-214ENST00000619119 COX17Q14061 63 aa10.51□□□□□ -0.73
SEMA3B-214ENST00000619119 SPART-AS1P0CW21 52 aa10.5□□□□□ -0.73
SEMA3B-214ENST00000619119 MGAM2Q2M2H8 2515 aa10.49□□□□□ -0.73
SEMA3B-214ENST00000619119 IGLV6-57P01721 117 aa10.49□□□□□ -0.73
SEMA3B-214ENST00000619119 H3BQ85 93 aa10.49□□□□□ -0.73
SEMA3B-214ENST00000619119 UBE2AP49459 152 aa10.49□□□□□ -0.73
SEMA3B-214ENST00000619119 HIGD2BQ4VC39 106 aa10.49□□□□□ -0.73
SEMA3B-214ENST00000619119 UNQ6190/PRO20217Q6UXQ8 127 aa10.47□□□□□ -0.73
SEMA3B-214ENST00000619119 HCG22E2RYF7 251 aa10.46□□□□□ -0.74
SEMA3B-214ENST00000619119 ST20-AS1Q8NBB2 130 aa10.46□□□□□ -0.74
SEMA3B-214ENST00000619119 PRR15LQ9BU68 103 aa10.46□□□□□ -0.74
SEMA3B-214ENST00000619119 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.45□□□□□ -0.74
SEMA3B-214ENST00000619119 XAGE1AQ9HD64 81 aa10.45□□□□□ -0.74
SEMA3B-214ENST00000619119 ZNF73O43830 326 aaPredicted RBP10.45□□□□□ -0.74
SEMA3B-214ENST00000619119 ZCCHC13Q8WW36 166 aaKnown RBP10.45□□□□□ -0.74
SEMA3B-214ENST00000619119 CHCHD10Q8WYQ3 142 aaPredicted RBP10.43□□□□□ -0.74
SEMA3B-214ENST00000619119 EGFEM1PQ0D2K5 195 aa10.43□□□□□ -0.74
SEMA3B-214ENST00000619119 CYP4F30PQ9H0H9 118 aa10.43□□□□□ -0.74
SEMA3B-214ENST00000619119 LCE6AA0A183 80 aa10.42□□□□□ -0.74
SEMA3B-214ENST00000619119 ETDCA0A1B0GVM5 59 aa10.42□□□□□ -0.74
SEMA3B-214ENST00000619119 ANGP03950 147 aaKnown RBP10.41□□□□□ -0.74
SEMA3B-214ENST00000619119 A6NED7 52 aa10.39□□□□□ -0.75
SEMA3B-214ENST00000619119 SPAG11BQ08648 103 aa10.39□□□□□ -0.75
SEMA3B-214ENST00000619119 LCA10Q71F78 164 aa10.39□□□□□ -0.75
SEMA3B-214ENST00000619119 DEFB105AQ8NG35 78 aa10.39□□□□□ -0.75
SEMA3B-214ENST00000619119 ELOF1P60002 83 aaKnown RBP10.39□□□□□ -0.75
SEMA3B-214ENST00000619119 A0A0J9YWU9 116 aa10.38□□□□□ -0.75
SEMA3B-214ENST00000619119 NDUFS5O43920 106 aa10.38□□□□□ -0.75
SEMA3B-214ENST00000619119 A0A1B0GUV1 79 aa10.38□□□□□ -0.75
SEMA3B-214ENST00000619119 Q8N9P0 234 aaPredicted RBP10.36□□□□□ -0.75
SEMA3B-214ENST00000619119 B9D2Q9BPU9 175 aa10.36□□□□□ -0.75
SEMA3B-214ENST00000619119 ATP11AUNQ6ZP68 121 aa10.36□□□□□ -0.75
SEMA3B-214ENST00000619119 A6NN06 94 aa10.35□□□□□ -0.75
SEMA3B-214ENST00000619119 REG3AQ06141 175 aa10.35□□□□□ -0.75
SEMA3B-214ENST00000619119 KPRPQ5T749 579 aaPredicted RBP10.34□□□□□ -0.75
SEMA3B-214ENST00000619119 DNAH3Q8TD57 4116 aa10.33□□□□□ -0.76
SEMA3B-214ENST00000619119 LIMD2Q9BT23 127 aa10.33□□□□□ -0.76
SEMA3B-214ENST00000619119 K7EQZ3 153 aa10.32□□□□□ -0.76
SEMA3B-214ENST00000619119 DEFB116Q30KQ4 102 aa10.32□□□□□ -0.76
SEMA3B-214ENST00000619119 LELP1Q5T871 98 aa10.32□□□□□ -0.76
SEMA3B-214ENST00000619119 LINC00208Q96KT6 92 aa10.31□□□□□ -0.76
SEMA3B-214ENST00000619119 PHF5AQ7RTV0 110 aaKnown RBP10.31□□□□□ -0.76
SEMA3B-214ENST00000619119 C8orf87E5RJ46 101 aa10.3□□□□□ -0.76
SEMA3B-214ENST00000619119 WFDC10BQ8IUB3 73 aa10.3□□□□□ -0.76
SEMA3B-214ENST00000619119 C7orf65Q6ZTY9 151 aa10.3□□□□□ -0.76
SEMA3B-214ENST00000619119 PRR26Q8N8Z3 221 aa10.3□□□□□ -0.76
SEMA3B-214ENST00000619119 NDUFB1O75438 58 aa10.29□□□□□ -0.76
SEMA3B-214ENST00000619119 LINC00528Q8N1L1 170 aa10.29□□□□□ -0.76
SEMA3B-214ENST00000619119 DEFB131BA0A096LNP1 70 aa10.28□□□□□ -0.76
SEMA3B-214ENST00000619119 MDFIQ99750 246 aa10.28□□□□□ -0.76
SEMA3B-214ENST00000619119 K7EIL1 84 aa10.28□□□□□ -0.76
SEMA3B-214ENST00000619119 DSCR10P59022 87 aa10.28□□□□□ -0.76
SEMA3B-214ENST00000619119 WFDC13Q8IUB5 93 aa10.27□□□□□ -0.77
SEMA3B-214ENST00000619119 A0A1W2PNM2 257 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms