RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 SYCNQ0VAF6 134 aa13.34□□□□□ -0.27
NEK3-208ENST00000618534 SERTAD4-AS1Q5TG53 156 aa13.33□□□□□ -0.27
NEK3-208ENST00000618534 OXLD1Q5BKU9 147 aa13.33□□□□□ -0.28
NEK3-208ENST00000618534 NREPQ16612 68 aa13.32□□□□□ -0.28
NEK3-208ENST00000618534 DEFB105AQ8NG35 78 aa13.32□□□□□ -0.28
NEK3-208ENST00000618534 SERP1Q9Y6X1 66 aa13.32□□□□□ -0.28
NEK3-208ENST00000618534 BPY2O14599 106 aa13.32□□□□□ -0.28
NEK3-208ENST00000618534 NKAPP1Q8N9T2 125 aa13.32□□□□□ -0.28
NEK3-208ENST00000618534 KCNQ1DNQ9H478 68 aa13.32□□□□□ -0.28
NEK3-208ENST00000618534 EPM2AB3EWF7 344 aa13.31□□□□□ -0.28
NEK3-208ENST00000618534 LINC01556Q5JQF7 62 aa13.31□□□□□ -0.28
NEK3-208ENST00000618534 C3orf84H3BNL1 204 aa13.31□□□□□ -0.28
NEK3-208ENST00000618534 IGKV4-1P06312 121 aa13.31□□□□□ -0.28
NEK3-208ENST00000618534 HRCT1Q6UXD1 115 aa13.31□□□□□ -0.28
NEK3-208ENST00000618534 C7orf33Q8WU49 177 aa13.31□□□□□ -0.28
NEK3-208ENST00000618534 KRTAP10-11P60412 298 aa13.3□□□□□ -0.28
NEK3-208ENST00000618534 Q8N377 158 aa13.29□□□□□ -0.28
NEK3-208ENST00000618534 TENM3Q9P273 2699 aa13.28□□□□□ -0.28
NEK3-208ENST00000618534 F8WDY8 70 aa13.28□□□□□ -0.28
NEK3-208ENST00000618534 DEFB131BA0A096LNP1 70 aa13.25□□□□□ -0.29
NEK3-208ENST00000618534 TMEM254Q8TBM7 123 aa13.24□□□□□ -0.29
NEK3-208ENST00000618534 NDUFC1O43677 76 aa13.23□□□□□ -0.29
NEK3-208ENST00000618534 IGLV5-48A0A075B6I7 105 aa13.23□□□□□ -0.29
NEK3-208ENST00000618534 RPL37AP8A6NKH3 93 aa13.23□□□□□ -0.29
NEK3-208ENST00000618534 FAM168BA1KXE4 195 aa13.21□□□□□ -0.3
NEK3-208ENST00000618534 Q6ZRX8 168 aa13.2□□□□□ -0.3
NEK3-208ENST00000618534 Q9BRP9 147 aa13.2□□□□□ -0.3
NEK3-208ENST00000618534 OCR1Q9BZK8 76 aa13.2□□□□□ -0.3
NEK3-208ENST00000618534 ERC2-IT1O76042 136 aa13.19□□□□□ -0.3
NEK3-208ENST00000618534 C11orf45Q8TAV5 145 aa13.19□□□□□ -0.3
NEK3-208ENST00000618534 DHRS4-AS1Q9P1J3 65 aa13.19□□□□□ -0.3
NEK3-208ENST00000618534 KRTAP4-16G5E9R7 235 aaPredicted RBP13.18□□□□□ -0.3
NEK3-208ENST00000618534 TLX1NBP0CAT3 122 aa13.18□□□□□ -0.3
NEK3-208ENST00000618534 DNAH10OSP0CZ25 163 aa13.18□□□□□ -0.3
NEK3-208ENST00000618534 ANK2Q01484 3957 aa13.18□□□□□ -0.3
NEK3-208ENST00000618534 A0A1W2PNM2 257 aa13.17□□□□□ -0.3
NEK3-208ENST00000618534 CASC10Q5T4H9 136 aa13.17□□□□□ -0.3
NEK3-208ENST00000618534 PLA2G2DQ9UNK4 145 aa13.17□□□□□ -0.3
NEK3-208ENST00000618534 FUSP35637 526 aaKnown RBP eCLIP13.16□□□□□ -0.3
NEK3-208ENST00000618534 ST20-AS1Q8NBB2 130 aa13.16□□□□□ -0.3
NEK3-208ENST00000618534 IGLV1-50A0A075B6I6 118 aa13.15□□□□□ -0.3
NEK3-208ENST00000618534 ETDCA0A1B0GVM5 59 aa13.15□□□□□ -0.3
NEK3-208ENST00000618534 PRYO14603 147 aa13.15□□□□□ -0.3
NEK3-208ENST00000618534 KRTAP7-1Q8IUC3 87 aa13.14□□□□□ -0.31
NEK3-208ENST00000618534 SPRR1AP35321 89 aa13.13□□□□□ -0.31
NEK3-208ENST00000618534 TNP2Q05952 138 aa13.13□□□□□ -0.31
NEK3-208ENST00000618534 A0A0U1RQV1 116 aa13.13□□□□□ -0.31
NEK3-208ENST00000618534 ATP5EP56381 51 aaPredicted RBP13.13□□□□□ -0.31
NEK3-208ENST00000618534 C1orf137Q5JT78 98 aa13.13□□□□□ -0.31
NEK3-208ENST00000618534 FP248Q71RG6 208 aaPredicted RBP13.13□□□□□ -0.31
NEK3-208ENST00000618534 MRAPQ8TCY5 172 aa13.13□□□□□ -0.31
NEK3-208ENST00000618534 IGLV5-37A0A075B6J1 123 aa13.12□□□□□ -0.31
NEK3-208ENST00000618534 SMIM26A0A096LP01 95 aa13.11□□□□□ -0.31
NEK3-208ENST00000618534 SMIM29Q86T20 159 aa13.1□□□□□ -0.31
NEK3-208ENST00000618534 Q8NBF4 154 aa13.09□□□□□ -0.31
NEK3-208ENST00000618534 LINC00588Q9Y4M8 146 aa13.09□□□□□ -0.31
NEK3-208ENST00000618534 HIGD2AQ9BW72 106 aa13.08□□□□□ -0.32
NEK3-208ENST00000618534 A0A1B0GW54 56 aa13.08□□□□□ -0.32
NEK3-208ENST00000618534 LINC00474Q9P2X8 69 aa13.08□□□□□ -0.32
NEK3-208ENST00000618534 FAM30AQ9NZY2 134 aa13.07□□□□□ -0.32
NEK3-208ENST00000618534 FLNBO75369 2602 aaKnown RBP13.06□□□□□ -0.32
NEK3-208ENST00000618534 MRPL55Q7Z7F7 128 aaKnown RBP13.05□□□□□ -0.32
NEK3-208ENST00000618534 UBE2BP63146 152 aa13.04□□□□□ -0.32
NEK3-208ENST00000618534 SPRR4Q96PI1 79 aa13.04□□□□□ -0.32
NEK3-208ENST00000618534 DSCR10P59022 87 aa13.01□□□□□ -0.33
NEK3-208ENST00000618534 CMYA5Q8N3K9 4069 aa13.01□□□□□ -0.33
NEK3-208ENST00000618534 FAM229BQ4G0N7 80 aa13□□□□□ -0.33
NEK3-208ENST00000618534 LINC00336Q6ZUF6 198 aa13□□□□□ -0.33
NEK3-208ENST00000618534 DNAH1Q9P2D7 4330 aa13□□□□□ -0.33
NEK3-208ENST00000618534 STAB1Q9NY15 2570 aa13□□□□□ -0.33
NEK3-208ENST00000618534 K7EQZ3 153 aa12.99□□□□□ -0.33
NEK3-208ENST00000618534 REG3GQ6UW15 175 aa12.98□□□□□ -0.33
NEK3-208ENST00000618534 A0A0G2JQZ4 141 aa12.96□□□□□ -0.33
NEK3-208ENST00000618534 A0A1W2PNN7 141 aa12.96□□□□□ -0.33
NEK3-208ENST00000618534 KRTAP24-1Q3LI83 254 aa12.96□□□□□ -0.33
NEK3-208ENST00000618534 LINC00476Q8WZB0 136 aa12.96□□□□□ -0.33
NEK3-208ENST00000618534 MAST4O15021 2626 aa12.96□□□□□ -0.34
NEK3-208ENST00000618534 BAHCC1Q9P281 2608 aa12.96□□□□□ -0.34
NEK3-208ENST00000618534 LCE6AA0A183 80 aa12.96□□□□□ -0.34
NEK3-208ENST00000618534 NOTCH1P46531 2555 aa12.94□□□□□ -0.34
NEK3-208ENST00000618534 DNAH3Q8TD57 4116 aa12.93□□□□□ -0.34
NEK3-208ENST00000618534 F8P00451 2351 aa12.93□□□□□ -0.34
NEK3-208ENST00000618534 PRB2P02812 416 aaPredicted RBP12.91□□□□□ -0.34
NEK3-208ENST00000618534 FBN1P35555 2871 aaKnown RBP12.91□□□□□ -0.34
NEK3-208ENST00000618534 IGFL1Q6UW32 110 aa12.9□□□□□ -0.34
NEK3-208ENST00000618534 MPLKIPQ8TAP9 179 aa12.89□□□□□ -0.35
NEK3-208ENST00000618534 PRO0628Q9UI54 55 aa12.89□□□□□ -0.35
NEK3-208ENST00000618534 PRLHP81277 87 aa12.89□□□□□ -0.35
NEK3-208ENST00000618534 PSCAO43653 123 aa12.88□□□□□ -0.35
NEK3-208ENST00000618534 A0A096LNI7 61 aa12.87□□□□□ -0.35
NEK3-208ENST00000618534 HCG22E2RYF7 251 aa12.87□□□□□ -0.35
NEK3-208ENST00000618534 DEFB116Q30KQ4 102 aa12.87□□□□□ -0.35
NEK3-208ENST00000618534 ZCCHC13Q8WW36 166 aaKnown RBP12.87□□□□□ -0.35
NEK3-208ENST00000618534 IGKV2-24A0A0C4DH68 120 aa12.86□□□□□ -0.35
NEK3-208ENST00000618534 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.83□□□□□ -0.35
NEK3-208ENST00000618534 A0A087WSZ3 146 aa12.81□□□□□ -0.36
NEK3-208ENST00000618534 C16orf90A8MZG2 172 aa12.8□□□□□ -0.36
NEK3-208ENST00000618534 KRTAP1-5Q9BYS1 174 aa12.8□□□□□ -0.36
NEK3-208ENST00000618534 hDV103S1A0JD37 113 aa12.8□□□□□ -0.36
NEK3-208ENST00000618534 IGLV8-61A0A075B6I0 122 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms