RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PCSK5Q92824 1860 aa7.03□□□□□ -1.28
CLTCL1-209ENST00000617103 LCA10Q71F78 164 aa7.03□□□□□ -1.28
CLTCL1-209ENST00000617103 MIR22HGQ0VDD5 57 aa7.03□□□□□ -1.28
CLTCL1-209ENST00000617103 SPANXA2-OT1Q8N9U9 137 aa7.02□□□□□ -1.29
CLTCL1-209ENST00000617103 C15orf56Q8N910 161 aa7.01□□□□□ -1.29
CLTCL1-209ENST00000617103 NBDYA0A0U1RRE5 68 aa7.01□□□□□ -1.29
CLTCL1-209ENST00000617103 SSBP3-AS1Q7Z2R9 100 aa7□□□□□ -1.29
CLTCL1-209ENST00000617103 RTL8CO15255 209 aa7□□□□□ -1.29
CLTCL1-209ENST00000617103 A0A1W2PNM2 257 aa7□□□□□ -1.29
CLTCL1-209ENST00000617103 GIG44P09565 113 aaPredicted RBP7□□□□□ -1.29
CLTCL1-209ENST00000617103 A0A1B0GVX0 72 aa6.99□□□□□ -1.29
CLTCL1-209ENST00000617103 LINC00612Q8N6U2 182 aa6.99□□□□□ -1.29
CLTCL1-209ENST00000617103 USP24Q9UPU5 2620 aa6.99□□□□□ -1.29
CLTCL1-209ENST00000617103 Q96NJ1 140 aa6.99□□□□□ -1.29
CLTCL1-209ENST00000617103 ZNF575Q86XF7 245 aa6.98□□□□□ -1.29
CLTCL1-209ENST00000617103 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
CLTCL1-209ENST00000617103 TYMSOSQ8TAI1 123 aa6.98□□□□□ -1.29
CLTCL1-209ENST00000617103 A0A0G2JQZ4 141 aa6.97□□□□□ -1.29
CLTCL1-209ENST00000617103 A0A1W2PNN7 141 aa6.97□□□□□ -1.29
CLTCL1-209ENST00000617103 OCR1Q9BZK8 76 aa6.97□□□□□ -1.29
CLTCL1-209ENST00000617103 TLX1NBP0CAT3 122 aa6.97□□□□□ -1.29
CLTCL1-209ENST00000617103 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
CLTCL1-209ENST00000617103 Q1T7F1 81 aa6.96□□□□□ -1.3
CLTCL1-209ENST00000617103 C19orf73Q9NVV2 129 aa6.96□□□□□ -1.3
CLTCL1-209ENST00000617103 IGLV5-48A0A075B6I7 105 aa6.95□□□□□ -1.3
CLTCL1-209ENST00000617103 DSCR10P59022 87 aa6.93□□□□□ -1.3
CLTCL1-209ENST00000617103 EPG5Q9HCE0 2579 aa6.9□□□□□ -1.3
CLTCL1-209ENST00000617103 CRIPTQ9P021 101 aa6.9□□□□□ -1.3
CLTCL1-209ENST00000617103 Q5XG85 94 aa6.9□□□□□ -1.31
CLTCL1-209ENST00000617103 ZNF861PO60384 105 aa6.89□□□□□ -1.31
CLTCL1-209ENST00000617103 KRTAP24-1Q3LI83 254 aa6.89□□□□□ -1.31
CLTCL1-209ENST00000617103 BPTFQ12830 3046 aa6.88□□□□□ -1.31
CLTCL1-209ENST00000617103 A0A096LNT2 108 aa6.88□□□□□ -1.31
CLTCL1-209ENST00000617103 FAM104AQ969W3 186 aa6.88□□□□□ -1.31
CLTCL1-209ENST00000617103 MGAM2Q2M2H8 2515 aa6.87□□□□□ -1.31
CLTCL1-209ENST00000617103 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
CLTCL1-209ENST00000617103 C9orf163Q8N9P6 203 aa6.87□□□□□ -1.31
CLTCL1-209ENST00000617103 SPRR4Q96PI1 79 aa6.85□□□□□ -1.31
CLTCL1-209ENST00000617103 CYSTM1Q9H1C7 97 aa6.85□□□□□ -1.31
CLTCL1-209ENST00000617103 PRR26Q8N8Z3 221 aa6.84□□□□□ -1.31
CLTCL1-209ENST00000617103 CR1P17927 2039 aa6.84□□□□□ -1.31
CLTCL1-209ENST00000617103 FP248Q71RG6 208 aaPredicted RBP6.84□□□□□ -1.31
CLTCL1-209ENST00000617103 IGLV5-37A0A075B6J1 123 aa6.84□□□□□ -1.31
CLTCL1-209ENST00000617103 APLNQ9ULZ1 77 aa6.84□□□□□ -1.32
CLTCL1-209ENST00000617103 GOLGB1Q14789 3259 aaKnown RBP6.83□□□□□ -1.32
CLTCL1-209ENST00000617103 IGLV7-46A0A075B6I9 117 aa6.82□□□□□ -1.32
CLTCL1-209ENST00000617103 Q75L30 129 aa6.82□□□□□ -1.32
CLTCL1-209ENST00000617103 RBM12B-AS1Q9P1G2 102 aa6.82□□□□□ -1.32
CLTCL1-209ENST00000617103 ANAPC11Q9NYG5 84 aa6.8□□□□□ -1.32
CLTCL1-209ENST00000617103 CNBPP62633 177 aaKnown RBP6.8□□□□□ -1.32
CLTCL1-209ENST00000617103 FAM229BQ4G0N7 80 aa6.79□□□□□ -1.32
CLTCL1-209ENST00000617103 CASC10Q5T4H9 136 aa6.79□□□□□ -1.32
CLTCL1-209ENST00000617103 Q8N9P0 234 aaPredicted RBP6.79□□□□□ -1.32
CLTCL1-209ENST00000617103 KRTAP10-11P60412 298 aa6.79□□□□□ -1.32
CLTCL1-209ENST00000617103 FLNBO75369 2602 aaKnown RBP6.78□□□□□ -1.32
CLTCL1-209ENST00000617103 DNAH12Q6ZR08 3092 aa6.77□□□□□ -1.33
CLTCL1-209ENST00000617103 LINC00304Q8N9R0 145 aa6.77□□□□□ -1.33
CLTCL1-209ENST00000617103 PSORS1C2Q9UIG4 136 aa6.77□□□□□ -1.33
CLTCL1-209ENST00000617103 A0A087WTM6 91 aa6.77□□□□□ -1.33
CLTCL1-209ENST00000617103 IGLV7-43P04211 117 aa6.76□□□□□ -1.33
CLTCL1-209ENST00000617103 LINC01558Q9Y6Z2 57 aa6.76□□□□□ -1.33
CLTCL1-209ENST00000617103 KRTAP10-3P60369 221 aa6.76□□□□□ -1.33
CLTCL1-209ENST00000617103 ATRQ13535 2644 aa6.75□□□□□ -1.33
CLTCL1-209ENST00000617103 K7EIL1 84 aa6.75□□□□□ -1.33
CLTCL1-209ENST00000617103 Q8N1X5 172 aa6.74□□□□□ -1.33
CLTCL1-209ENST00000617103 LINC01554Q52M75 96 aa6.73□□□□□ -1.33
CLTCL1-209ENST00000617103 C9orf92A6NGG3 77 aa6.72□□□□□ -1.33
CLTCL1-209ENST00000617103 OXTP01178 125 aa6.71□□□□□ -1.33
CLTCL1-209ENST00000617103 Q5VV11 94 aa6.71□□□□□ -1.34
CLTCL1-209ENST00000617103 HECTD1Q9ULT8 2610 aa6.71□□□□□ -1.34
CLTCL1-209ENST00000617103 Q8NDZ9 215 aa6.71□□□□□ -1.34
CLTCL1-209ENST00000617103 CEP350Q5VT06 3117 aa6.7□□□□□ -1.34
CLTCL1-209ENST00000617103 MAST4O15021 2626 aa6.7□□□□□ -1.34
CLTCL1-209ENST00000617103 HRES1P13985 223 aa6.7□□□□□ -1.34
CLTCL1-209ENST00000617103 A0A0D9SG42 100 aa6.69□□□□□ -1.34
CLTCL1-209ENST00000617103 MMP24-AS1A0A0U1RRL7 71 aa6.69□□□□□ -1.34
CLTCL1-209ENST00000617103 FLNAP21333 2647 aaKnown RBP6.69□□□□□ -1.34
CLTCL1-209ENST00000617103 AKAP13Q12802 2813 aa6.68□□□□□ -1.34
CLTCL1-209ENST00000617103 WWC2-AS2Q96NR7 200 aa6.67□□□□□ -1.34
CLTCL1-209ENST00000617103 SPRR1AP35321 89 aa6.67□□□□□ -1.34
CLTCL1-209ENST00000617103 A0A1B0GU33 70 aa6.66□□□□□ -1.34
CLTCL1-209ENST00000617103 PRAC1Q96KF2 57 aa6.66□□□□□ -1.34
CLTCL1-209ENST00000617103 ITPR3Q14573 2671 aa6.62□□□□□ -1.35
CLTCL1-209ENST00000617103 H3BS24 57 aa6.62□□□□□ -1.35
CLTCL1-209ENST00000617103 LUZP6Q538Z0 58 aa6.62□□□□□ -1.35
CLTCL1-209ENST00000617103 SPINK7P58062 85 aa6.61□□□□□ -1.35
CLTCL1-209ENST00000617103 KRTAP1-3Q8IUG1 177 aa6.61□□□□□ -1.35
CLTCL1-209ENST00000617103 LINC00472Q9H8W2 130 aa6.61□□□□□ -1.35
CLTCL1-209ENST00000617103 CENPEQ02224 2701 aa6.59□□□□□ -1.35
CLTCL1-209ENST00000617103 UTRNP46939 3433 aa6.59□□□□□ -1.35
CLTCL1-209ENST00000617103 A0A0C4DFX4 3053 aa6.59□□□□□ -1.35
CLTCL1-209ENST00000617103 SPRR1BP22528 89 aa6.59□□□□□ -1.36
CLTCL1-209ENST00000617103 CHD6Q8TD26 2715 aa6.58□□□□□ -1.36
CLTCL1-209ENST00000617103 KRTAP1-1Q07627 177 aa6.58□□□□□ -1.36
CLTCL1-209ENST00000617103 COX6B2Q6YFQ2 88 aa6.57□□□□□ -1.36
CLTCL1-209ENST00000617103 SMR3BP02814 79 aaPredicted RBP6.57□□□□□ -1.36
CLTCL1-209ENST00000617103 CSAG1Q6PB30 78 aa6.57□□□□□ -1.36
CLTCL1-209ENST00000617103 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.56□□□□□ -1.36
CLTCL1-209ENST00000617103 Q5W150 140 aa6.54□□□□□ -1.36
CLTCL1-209ENST00000617103 STAB1Q9NY15 2570 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms