RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 LINC01547P58512 204 aaPredicted RBP8.76□□□□□ -1.01
PPP4R3B-206ENST00000616407 SNURFQ9Y675 71 aa8.76□□□□□ -1.01
PPP4R3B-206ENST00000616407 NSD1Q96L73 2696 aaPredicted RBP8.76□□□□□ -1.01
PPP4R3B-206ENST00000616407 NHLRC4P0CG21 123 aaPredicted RBP8.75□□□□□ -1.01
PPP4R3B-206ENST00000616407 TRBV7-6A0A0J9YX20 115 aa8.75□□□□□ -1.01
PPP4R3B-206ENST00000616407 SMCR5Q8TEV8 140 aa8.75□□□□□ -1.01
PPP4R3B-206ENST00000616407 WIPF1O43516 503 aa8.74□□□□□ -1.01
PPP4R3B-206ENST00000616407 NBEAL1Q6ZS30 2694 aa8.74□□□□□ -1.01
PPP4R3B-206ENST00000616407 IGLV9-49A0A0B4J1Y8 123 aa8.74□□□□□ -1.01
PPP4R3B-206ENST00000616407 Q6ZQT0 140 aa8.73□□□□□ -1.01
PPP4R3B-206ENST00000616407 SERTAD4-AS1Q5TG53 156 aa8.73□□□□□ -1.01
PPP4R3B-206ENST00000616407 FAM168BA1KXE4 195 aa8.73□□□□□ -1.01
PPP4R3B-206ENST00000616407 LRCOL1A6NCL2 159 aa8.73□□□□□ -1.01
PPP4R3B-206ENST00000616407 WFDC13Q8IUB5 93 aa8.73□□□□□ -1.01
PPP4R3B-206ENST00000616407 C9orf129Q5T035 196 aaKnown RBP8.72□□□□□ -1.01
PPP4R3B-206ENST00000616407 HRCT1Q6UXD1 115 aa8.72□□□□□ -1.01
PPP4R3B-206ENST00000616407 BAHCC1Q9P281 2608 aa8.71□□□□□ -1.01
PPP4R3B-206ENST00000616407 TM2D3Q9BRN9 247 aa8.71□□□□□ -1.01
PPP4R3B-206ENST00000616407 Q9BRP9 147 aa8.71□□□□□ -1.01
PPP4R3B-206ENST00000616407 Q8N9L7 120 aa8.71□□□□□ -1.02
PPP4R3B-206ENST00000616407 Q6ZRX8 168 aa8.7□□□□□ -1.02
PPP4R3B-206ENST00000616407 TRAV7A0A075B6U4 112 aa8.69□□□□□ -1.02
PPP4R3B-206ENST00000616407 A0A087WSZ3 146 aa8.69□□□□□ -1.02
PPP4R3B-206ENST00000616407 FAM236DA0A1B0GTK5 79 aa8.69□□□□□ -1.02
PPP4R3B-206ENST00000616407 FAM236CP0DP71 79 aa8.69□□□□□ -1.02
PPP4R3B-206ENST00000616407 ST20-AS1Q8NBB2 130 aa8.69□□□□□ -1.02
PPP4R3B-206ENST00000616407 CSMD1Q96PZ7 3565 aa8.69□□□□□ -1.02
PPP4R3B-206ENST00000616407 LOC110117498A0A087WWA1 95 aa8.68□□□□□ -1.02
PPP4R3B-206ENST00000616407 CASC10Q5T4H9 136 aa8.68□□□□□ -1.02
PPP4R3B-206ENST00000616407 DEFB116Q30KQ4 102 aa8.68□□□□□ -1.02
PPP4R3B-206ENST00000616407 CHTF8P0CG12 524 aa8.68□□□□□ -1.02
PPP4R3B-206ENST00000616407 TMEM258P61165 79 aa8.68□□□□□ -1.02
PPP4R3B-206ENST00000616407 NBDYA0A0U1RRE5 68 aa8.67□□□□□ -1.02
PPP4R3B-206ENST00000616407 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
PPP4R3B-206ENST00000616407 IGLV5-52A0A0A0MRZ9 124 aa8.67□□□□□ -1.02
PPP4R3B-206ENST00000616407 FAM30AQ9NZY2 134 aa8.67□□□□□ -1.02
PPP4R3B-206ENST00000616407 CELSR1Q9NYQ6 3014 aa8.67□□□□□ -1.02
PPP4R3B-206ENST00000616407 PHF5AQ7RTV0 110 aaKnown RBP8.66□□□□□ -1.02
PPP4R3B-206ENST00000616407 ZNF706Q9Y5V0 76 aaPredicted RBP8.66□□□□□ -1.02
PPP4R3B-206ENST00000616407 CXCL6P80162 114 aa8.66□□□□□ -1.02
PPP4R3B-206ENST00000616407 C16orf90A8MZG2 172 aa8.66□□□□□ -1.02
PPP4R3B-206ENST00000616407 C1orf134Q5TEV5 83 aa8.66□□□□□ -1.02
PPP4R3B-206ENST00000616407 KCNQ1DNQ9H478 68 aa8.66□□□□□ -1.02
PPP4R3B-206ENST00000616407 NIPBLQ6KC79 2804 aaeCLIP8.65□□□□□ -1.02
PPP4R3B-206ENST00000616407 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.02
PPP4R3B-206ENST00000616407 C4orf48Q5BLP8 95 aa8.65□□□□□ -1.03
PPP4R3B-206ENST00000616407 LINC01600Q96MT4 127 aa8.64□□□□□ -1.03
PPP4R3B-206ENST00000616407 IGLV1-50A0A075B6I6 118 aa8.63□□□□□ -1.03
PPP4R3B-206ENST00000616407 SVEP1Q4LDE5 3571 aa8.62□□□□□ -1.03
PPP4R3B-206ENST00000616407 Q8NDZ9 215 aa8.61□□□□□ -1.03
PPP4R3B-206ENST00000616407 NDUFC1O43677 76 aa8.6□□□□□ -1.03
PPP4R3B-206ENST00000616407 Q8NBF4 154 aa8.59□□□□□ -1.03
PPP4R3B-206ENST00000616407 LINC00476Q8WZB0 136 aa8.59□□□□□ -1.03
PPP4R3B-206ENST00000616407 IGKV4-1P06312 121 aa8.59□□□□□ -1.04
PPP4R3B-206ENST00000616407 TLX1NBP0CAT3 122 aa8.59□□□□□ -1.04
PPP4R3B-206ENST00000616407 EPM2AB3EWF7 344 aa8.58□□□□□ -1.04
PPP4R3B-206ENST00000616407 PRR4Q16378 134 aa8.58□□□□□ -1.04
PPP4R3B-206ENST00000616407 Q8N377 158 aa8.57□□□□□ -1.04
PPP4R3B-206ENST00000616407 SPENQ96T58 3664 aaKnown RBP8.56□□□□□ -1.04
PPP4R3B-206ENST00000616407 CRYGAP11844 174 aa8.55□□□□□ -1.04
PPP4R3B-206ENST00000616407 TMEM254Q8TBM7 123 aa8.55□□□□□ -1.04
PPP4R3B-206ENST00000616407 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
PPP4R3B-206ENST00000616407 TRBV7-4A0A0J9YYF1 115 aa8.54□□□□□ -1.04
PPP4R3B-206ENST00000616407 OBSCN-AS1Q96MR7 158 aa8.54□□□□□ -1.04
PPP4R3B-206ENST00000616407 APLNQ9ULZ1 77 aa8.54□□□□□ -1.04
PPP4R3B-206ENST00000616407 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
PPP4R3B-206ENST00000616407 RTL8CO15255 209 aa8.53□□□□□ -1.04
PPP4R3B-206ENST00000616407 CASC2Q6XLA1 102 aa8.52□□□□□ -1.04
PPP4R3B-206ENST00000616407 SMIM29Q86T20 159 aa8.52□□□□□ -1.05
PPP4R3B-206ENST00000616407 MPLKIPQ8TAP9 179 aa8.52□□□□□ -1.05
PPP4R3B-206ENST00000616407 A0A1B0GW54 56 aa8.52□□□□□ -1.05
PPP4R3B-206ENST00000616407 LINC00208Q96KT6 92 aa8.52□□□□□ -1.05
PPP4R3B-206ENST00000616407 A0A1W2PNN7 141 aa8.52□□□□□ -1.05
PPP4R3B-206ENST00000616407 HCG22E2RYF7 251 aa8.52□□□□□ -1.05
PPP4R3B-206ENST00000616407 TENM4Q6N022 2769 aa8.51□□□□□ -1.05
PPP4R3B-206ENST00000616407 ERC2-IT1O76042 136 aa8.5□□□□□ -1.05
PPP4R3B-206ENST00000616407 BSNQ9UPA5 3926 aa8.5□□□□□ -1.05
PPP4R3B-206ENST00000616407 C9orf163Q8N9P6 203 aa8.5□□□□□ -1.05
PPP4R3B-206ENST00000616407 IGHV6-1A0A0B4J1U7 121 aa8.5□□□□□ -1.05
PPP4R3B-206ENST00000616407 A0A0G2JQZ4 141 aa8.49□□□□□ -1.05
PPP4R3B-206ENST00000616407 ATP5EP56381 51 aaPredicted RBP8.49□□□□□ -1.05
PPP4R3B-206ENST00000616407 BCE1O60756 84 aa8.48□□□□□ -1.05
PPP4R3B-206ENST00000616407 MOBPQ13875 183 aa8.47□□□□□ -1.05
PPP4R3B-206ENST00000616407 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
PPP4R3B-206ENST00000616407 CNBPP62633 177 aaKnown RBP8.46□□□□□ -1.06
PPP4R3B-206ENST00000616407 KMT2BQ9UMN6 2715 aaPredicted RBP8.45□□□□□ -1.06
PPP4R3B-206ENST00000616407 C5orf47Q569G3 176 aa8.45□□□□□ -1.06
PPP4R3B-206ENST00000616407 IGFL1Q6UW32 110 aa8.44□□□□□ -1.06
PPP4R3B-206ENST00000616407 RPL37AP61513 92 aaKnown RBP8.44□□□□□ -1.06
PPP4R3B-206ENST00000616407 SERP1Q9Y6X1 66 aa8.44□□□□□ -1.06
PPP4R3B-206ENST00000616407 A0A087WTM6 91 aa8.44□□□□□ -1.06
PPP4R3B-206ENST00000616407 IGLV5-37A0A075B6J1 123 aa8.43□□□□□ -1.06
PPP4R3B-206ENST00000616407 CHKB-CPT1BH3BT56 60 aa8.43□□□□□ -1.06
PPP4R3B-206ENST00000616407 A0A1W2PNM2 257 aa8.42□□□□□ -1.06
PPP4R3B-206ENST00000616407 K7EQZ3 153 aa8.42□□□□□ -1.06
PPP4R3B-206ENST00000616407 H0Y9P7 68 aa8.41□□□□□ -1.06
PPP4R3B-206ENST00000616407 STAB2Q8WWQ8 2551 aa8.41□□□□□ -1.06
PPP4R3B-206ENST00000616407 PDZD2O15018 2839 aa8.41□□□□□ -1.06
PPP4R3B-206ENST00000616407 SMIM26A0A096LP01 95 aa8.4□□□□□ -1.06
PPP4R3B-206ENST00000616407 IGLV5-48A0A075B6I7 105 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms