RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 MUC2Q02817 5179 aa11.04□□□□□ -0.64
TRAPPC3-209ENST00000616395 UBE2V1Q13404 147 aa11.04□□□□□ -0.64
TRAPPC3-209ENST00000616395 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
TRAPPC3-209ENST00000616395 DPH3Q96FX2 82 aa11.03□□□□□ -0.64
TRAPPC3-209ENST00000616395 NAA38Q9BRA0 125 aaKnown RBP11.03□□□□□ -0.64
TRAPPC3-209ENST00000616395 A0A087WYN8 130 aa11.02□□□□□ -0.65
TRAPPC3-209ENST00000616395 K7EP34 96 aa11.02□□□□□ -0.65
TRAPPC3-209ENST00000616395 SLPIP03973 132 aa11.01□□□□□ -0.65
TRAPPC3-209ENST00000616395 TLX1NBP0CAT3 122 aa11.01□□□□□ -0.65
TRAPPC3-209ENST00000616395 S100A7L2Q5SY68 101 aa11.01□□□□□ -0.65
TRAPPC3-209ENST00000616395 TMEM126AQ9H061 195 aa11.01□□□□□ -0.65
TRAPPC3-209ENST00000616395 LOC107984640A0A0U1RRK4 108 aa11□□□□□ -0.65
TRAPPC3-209ENST00000616395 CHTF8P0CG12 524 aa11□□□□□ -0.65
TRAPPC3-209ENST00000616395 TRBV10-2A0A0K0K1G8 114 aa10.99□□□□□ -0.65
TRAPPC3-209ENST00000616395 EIF4EBP3O60516 100 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC3-209ENST00000616395 FAT4Q6V0I7 4981 aa10.98□□□□□ -0.65
TRAPPC3-209ENST00000616395 SNCGO76070 127 aa10.98□□□□□ -0.65
TRAPPC3-209ENST00000616395 RPL18AQ02543 176 aaKnown RBP10.98□□□□□ -0.65
TRAPPC3-209ENST00000616395 C7orf33Q8WU49 177 aa10.98□□□□□ -0.65
TRAPPC3-209ENST00000616395 CNBPP62633 177 aaKnown RBP10.97□□□□□ -0.65
TRAPPC3-209ENST00000616395 ATXN8Q156A1 80 aa10.97□□□□□ -0.65
TRAPPC3-209ENST00000616395 GAGE2EQ4V326 116 aa10.97□□□□□ -0.65
TRAPPC3-209ENST00000616395 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
TRAPPC3-209ENST00000616395 GAGE2DQ9UEU5 116 aa10.97□□□□□ -0.65
TRAPPC3-209ENST00000616395 RPL28P46779 137 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-209ENST00000616395 PRR3P79522 188 aaKnown RBP10.95□□□□□ -0.66
TRAPPC3-209ENST00000616395 XAGE1AQ9HD64 81 aa10.95□□□□□ -0.66
TRAPPC3-209ENST00000616395 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
TRAPPC3-209ENST00000616395 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
TRAPPC3-209ENST00000616395 H0YGX0 51 aa10.94□□□□□ -0.66
TRAPPC3-209ENST00000616395 TRIAP1O43715 76 aa10.94□□□□□ -0.66
TRAPPC3-209ENST00000616395 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
TRAPPC3-209ENST00000616395 NKAPP1Q8N9T2 125 aa10.94□□□□□ -0.66
TRAPPC3-209ENST00000616395 REG3GQ6UW15 175 aa10.93□□□□□ -0.66
TRAPPC3-209ENST00000616395 LINC00337Q8N6G1 96 aa10.93□□□□□ -0.66
TRAPPC3-209ENST00000616395 M0R378 163 aa10.92□□□□□ -0.66
TRAPPC3-209ENST00000616395 NCR3O14931 201 aa10.92□□□□□ -0.66
TRAPPC3-209ENST00000616395 Q6ZRP5 223 aa10.92□□□□□ -0.66
TRAPPC3-209ENST00000616395 F8W1H4 67 aa10.9□□□□□ -0.66
TRAPPC3-209ENST00000616395 GAGE2BQ13066 116 aa10.9□□□□□ -0.66
TRAPPC3-209ENST00000616395 SPINK6Q6UWN8 80 aa10.9□□□□□ -0.66
TRAPPC3-209ENST00000616395 LINC00474Q9P2X8 69 aa10.9□□□□□ -0.66
TRAPPC3-209ENST00000616395 SMIM11BQ8TCY0 68 aa10.89□□□□□ -0.67
TRAPPC3-209ENST00000616395 H3BMG7 143 aa10.88□□□□□ -0.67
TRAPPC3-209ENST00000616395 TCL1BO95988 128 aa10.87□□□□□ -0.67
TRAPPC3-209ENST00000616395 VPREB1P12018 145 aa10.87□□□□□ -0.67
TRAPPC3-209ENST00000616395 A0A0U1RQV1 116 aa10.86□□□□□ -0.67
TRAPPC3-209ENST00000616395 IGKV2-24A0A0C4DH68 120 aa10.85□□□□□ -0.67
TRAPPC3-209ENST00000616395 DNAL4O96015 105 aa10.85□□□□□ -0.67
TRAPPC3-209ENST00000616395 IGLV6-57P01721 117 aa10.84□□□□□ -0.67
TRAPPC3-209ENST00000616395 IGLV5-37A0A075B6J1 123 aa10.84□□□□□ -0.67
TRAPPC3-209ENST00000616395 TRAV23DV6A0A075B6W5 121 aa10.84□□□□□ -0.67
TRAPPC3-209ENST00000616395 A0A096LNI7 61 aa10.84□□□□□ -0.67
TRAPPC3-209ENST00000616395 A0A1B0GX51 115 aa10.84□□□□□ -0.67
TRAPPC3-209ENST00000616395 LST1O00453 97 aa10.84□□□□□ -0.67
TRAPPC3-209ENST00000616395 TRACP01848 142 aa10.84□□□□□ -0.67
TRAPPC3-209ENST00000616395 C9orf129Q5T035 196 aaKnown RBP10.84□□□□□ -0.67
TRAPPC3-209ENST00000616395 LCE2AQ5TA79 106 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC3-209ENST00000616395 DIRC1Q969H9 104 aa10.83□□□□□ -0.68
TRAPPC3-209ENST00000616395 SLC25A20O43772 301 aa10.82□□□□□ -0.68
TRAPPC3-209ENST00000616395 GHRHP01286 108 aa10.82□□□□□ -0.68
TRAPPC3-209ENST00000616395 TRBV10-3A0A0K0K1G6 114 aa10.81□□□□□ -0.68
TRAPPC3-209ENST00000616395 C9JAW5 83 aa10.81□□□□□ -0.68
TRAPPC3-209ENST00000616395 CLEC2BQ92478 149 aa10.81□□□□□ -0.68
TRAPPC3-209ENST00000616395 TRBV7-6A0A0J9YX20 115 aa10.8□□□□□ -0.68
TRAPPC3-209ENST00000616395 C6orf99Q4VX62 202 aa10.8□□□□□ -0.68
TRAPPC3-209ENST00000616395 H3BT86 120 aa10.78□□□□□ -0.68
TRAPPC3-209ENST00000616395 M0QXV9 152 aa10.78□□□□□ -0.68
TRAPPC3-209ENST00000616395 ZNF73O43830 326 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC3-209ENST00000616395 Q8NDZ9 215 aa10.78□□□□□ -0.68
TRAPPC3-209ENST00000616395 H3BQ85 93 aa10.77□□□□□ -0.69
TRAPPC3-209ENST00000616395 FAM19A5Q7Z5A7 132 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC3-209ENST00000616395 MRPL55Q7Z7F7 128 aaKnown RBP10.77□□□□□ -0.69
TRAPPC3-209ENST00000616395 PRYO14603 147 aa10.76□□□□□ -0.69
TRAPPC3-209ENST00000616395 COX7BP24311 80 aa10.76□□□□□ -0.69
TRAPPC3-209ENST00000616395 J3QR89 54 aa10.75□□□□□ -0.69
TRAPPC3-209ENST00000616395 ANKRD29Q8N6D5 301 aa10.75□□□□□ -0.69
TRAPPC3-209ENST00000616395 C22orf24Q9Y442 160 aa10.75□□□□□ -0.69
TRAPPC3-209ENST00000616395 KCNQ1DNQ9H478 68 aa10.74□□□□□ -0.69
TRAPPC3-209ENST00000616395 ETDCA0A1B0GVM5 59 aa10.71□□□□□ -0.69
TRAPPC3-209ENST00000616395 hADV29S1A0JD25 119 aa10.71□□□□□ -0.69
TRAPPC3-209ENST00000616395 LINC00167Q96N53 147 aa10.71□□□□□ -0.69
TRAPPC3-209ENST00000616395 ORMDL1Q9P0S3 153 aa10.71□□□□□ -0.69
TRAPPC3-209ENST00000616395 PRO0461Q9UI25 63 aa10.71□□□□□ -0.69
TRAPPC3-209ENST00000616395 IGLV1-50A0A075B6I6 118 aa10.7□□□□□ -0.7
TRAPPC3-209ENST00000616395 OCIAD2Q56VL3 154 aa10.7□□□□□ -0.7
TRAPPC3-209ENST00000616395 LINC00575Q6W349 94 aa10.7□□□□□ -0.7
TRAPPC3-209ENST00000616395 FAM168BA1KXE4 195 aa10.69□□□□□ -0.7
TRAPPC3-209ENST00000616395 K7ERU9 68 aa10.69□□□□□ -0.7
TRAPPC3-209ENST00000616395 BAALC-AS2P0C853 105 aa10.69□□□□□ -0.7
TRAPPC3-209ENST00000616395 ELOF1P60002 83 aaKnown RBP10.69□□□□□ -0.7
TRAPPC3-209ENST00000616395 UBE2BP63146 152 aa10.69□□□□□ -0.7
TRAPPC3-209ENST00000616395 TEN1Q86WV5 123 aa10.69□□□□□ -0.7
TRAPPC3-209ENST00000616395 MTURNQ8N3F0 131 aa10.69□□□□□ -0.7
TRAPPC3-209ENST00000616395 KRTAP3-3Q9BYR6 98 aa10.69□□□□□ -0.7
TRAPPC3-209ENST00000616395 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
TRAPPC3-209ENST00000616395 PSORS1C2Q9UIG4 136 aa10.68□□□□□ -0.7
TRAPPC3-209ENST00000616395 A0A1W2PNN7 141 aa10.67□□□□□ -0.7
TRAPPC3-209ENST00000616395 PRR4Q16378 134 aa10.67□□□□□ -0.7
TRAPPC3-209ENST00000616395 ETDBQ3ZM63 59 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms