RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 FASNP49327 2511 aaKnown RBP8.47□□□□□ -1.05
TCF4-248ENST00000616053 K7EIL1 84 aa8.46□□□□□ -1.05
TCF4-248ENST00000616053 A0A1B0GVX0 72 aa8.46□□□□□ -1.05
TCF4-248ENST00000616053 IGLV7-43P04211 117 aa8.46□□□□□ -1.06
TCF4-248ENST00000616053 ANAPC11Q9NYG5 84 aa8.46□□□□□ -1.06
TCF4-248ENST00000616053 Q8NAQ8 132 aa8.44□□□□□ -1.06
TCF4-248ENST00000616053 FAM104AQ969W3 186 aa8.44□□□□□ -1.06
TCF4-248ENST00000616053 A0A1W2PPR1 153 aa8.44□□□□□ -1.06
TCF4-248ENST00000616053 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
TCF4-248ENST00000616053 LITAFQ99732 161 aa8.42□□□□□ -1.06
TCF4-248ENST00000616053 USP9YO00507 2555 aaPredicted RBP8.42□□□□□ -1.06
TCF4-248ENST00000616053 ANKRD17O75179 2603 aaKnown RBP8.4□□□□□ -1.06
TCF4-248ENST00000616053 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.07
TCF4-248ENST00000616053 COL4A4P53420 1690 aaPredicted RBP8.39□□□□□ -1.07
TCF4-248ENST00000616053 A8MUN3 132 aa8.39□□□□□ -1.07
TCF4-248ENST00000616053 CSAG1Q6PB30 78 aa8.39□□□□□ -1.07
TCF4-248ENST00000616053 Q6ZPA2 131 aa8.38□□□□□ -1.07
TCF4-248ENST00000616053 PRR26Q8N8Z3 221 aa8.38□□□□□ -1.07
TCF4-248ENST00000616053 A0A0A0MQY5 61 aa8.38□□□□□ -1.07
TCF4-248ENST00000616053 SEC61BP60468 96 aaKnown RBP8.37□□□□□ -1.07
TCF4-248ENST00000616053 Q1T7F1 81 aa8.37□□□□□ -1.07
TCF4-248ENST00000616053 LOC110117498A0A087WWA1 95 aa8.36□□□□□ -1.07
TCF4-248ENST00000616053 IGFL1Q6UW32 110 aa8.35□□□□□ -1.07
TCF4-248ENST00000616053 R4GN34 69 aa8.35□□□□□ -1.07
TCF4-248ENST00000616053 EPG5Q9HCE0 2579 aa8.34□□□□□ -1.07
TCF4-248ENST00000616053 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
TCF4-248ENST00000616053 PRR15Q8IV56 129 aa8.34□□□□□ -1.07
TCF4-248ENST00000616053 CD164Q04900 197 aa8.34□□□□□ -1.07
TCF4-248ENST00000616053 USP24Q9UPU5 2620 aa8.34□□□□□ -1.07
TCF4-248ENST00000616053 COL4A3Q01955 1670 aa8.33□□□□□ -1.08
TCF4-248ENST00000616053 COL27A1Q8IZC6 1860 aaPredicted RBP8.33□□□□□ -1.08
TCF4-248ENST00000616053 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
TCF4-248ENST00000616053 C10orf142B7Z368 130 aa8.32□□□□□ -1.08
TCF4-248ENST00000616053 S4R3F8 94 aa8.32□□□□□ -1.08
TCF4-248ENST00000616053 KRTAP10-11P60412 298 aa8.32□□□□□ -1.08
TCF4-248ENST00000616053 LTBP2Q14767 1821 aa8.31□□□□□ -1.08
TCF4-248ENST00000616053 C15orf56Q8N910 161 aa8.3□□□□□ -1.08
TCF4-248ENST00000616053 LINC00612Q8N6U2 182 aa8.27□□□□□ -1.08
TCF4-248ENST00000616053 WIPF1O43516 503 aa8.26□□□□□ -1.09
TCF4-248ENST00000616053 FAM218AQ96MZ4 157 aa8.26□□□□□ -1.09
TCF4-248ENST00000616053 KCNQ1DNQ9H478 68 aa8.24□□□□□ -1.09
TCF4-248ENST00000616053 CASC10Q5T4H9 136 aa8.23□□□□□ -1.09
TCF4-248ENST00000616053 SPRR4Q96PI1 79 aa8.23□□□□□ -1.09
TCF4-248ENST00000616053 A0A1B0GU33 70 aa8.23□□□□□ -1.09
TCF4-248ENST00000616053 H7BZZ5 65 aa8.23□□□□□ -1.09
TCF4-248ENST00000616053 GOLGB1Q14789 3259 aaKnown RBP8.22□□□□□ -1.09
TCF4-248ENST00000616053 A0A0G2JQZ4 141 aa8.22□□□□□ -1.09
TCF4-248ENST00000616053 A0A1W2PNN7 141 aa8.22□□□□□ -1.09
TCF4-248ENST00000616053 TNP2Q05952 138 aa8.22□□□□□ -1.09
TCF4-248ENST00000616053 SPINK7P58062 85 aa8.2□□□□□ -1.1
TCF4-248ENST00000616053 COX8CQ7Z4L0 72 aa8.19□□□□□ -1.1
TCF4-248ENST00000616053 CRIP3Q6Q6R5 217 aa8.19□□□□□ -1.1
TCF4-248ENST00000616053 AKAP13Q12802 2813 aa8.18□□□□□ -1.1
TCF4-248ENST00000616053 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.17□□□□□ -1.1
TCF4-248ENST00000616053 LCA10Q71F78 164 aa8.17□□□□□ -1.1
TCF4-248ENST00000616053 MGAM2Q2M2H8 2515 aa8.16□□□□□ -1.1
TCF4-248ENST00000616053 URB1-AS1Q96HZ7 61 aa8.15□□□□□ -1.1
TCF4-248ENST00000616053 C19orf73Q9NVV2 129 aa8.14□□□□□ -1.11
TCF4-248ENST00000616053 CENPFP49454 3210 aa8.13□□□□□ -1.11
TCF4-248ENST00000616053 ANKRD11Q6UB99 2663 aaPredicted RBP8.13□□□□□ -1.11
TCF4-248ENST00000616053 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
TCF4-248ENST00000616053 SRCAPQ6ZRS2 3230 aa8.12□□□□□ -1.11
TCF4-248ENST00000616053 Q8N377 158 aa8.11□□□□□ -1.11
TCF4-248ENST00000616053 M0QZ58 72 aa8.1□□□□□ -1.11
TCF4-248ENST00000616053 CEP295Q9C0D2 2601 aa8.09□□□□□ -1.11
TCF4-248ENST00000616053 A0A096LNJ9 63 aa8.08□□□□□ -1.12
TCF4-248ENST00000616053 OXTP01178 125 aa8.08□□□□□ -1.12
TCF4-248ENST00000616053 CNBPP62633 177 aaKnown RBP8.06□□□□□ -1.12
TCF4-248ENST00000616053 ZCCHC13Q8WW36 166 aaKnown RBP8.03□□□□□ -1.12
TCF4-248ENST00000616053 ATRQ13535 2644 aa8.02□□□□□ -1.12
TCF4-248ENST00000616053 MAST4O15021 2626 aa8.02□□□□□ -1.13
TCF4-248ENST00000616053 MUC22E2RYF6 1773 aaPredicted RBP8.01□□□□□ -1.13
TCF4-248ENST00000616053 HECTD1Q9ULT8 2610 aa8□□□□□ -1.13
TCF4-248ENST00000616053 FAM229BQ4G0N7 80 aa8□□□□□ -1.13
TCF4-248ENST00000616053 PRR34Q9NV39 138 aa8□□□□□ -1.13
TCF4-248ENST00000616053 FLNBO75369 2602 aaKnown RBP7.99□□□□□ -1.13
TCF4-248ENST00000616053 LINC01546A6NGU7 62 aa7.97□□□□□ -1.13
TCF4-248ENST00000616053 STAB1Q9NY15 2570 aa7.96□□□□□ -1.14
TCF4-248ENST00000616053 SPANXA2-OT1Q8N9U9 137 aa7.96□□□□□ -1.14
TCF4-248ENST00000616053 LINC00310P59036 64 aa7.96□□□□□ -1.14
TCF4-248ENST00000616053 PCNTO95613 3336 aa7.94□□□□□ -1.14
TCF4-248ENST00000616053 A0A1W2PNM2 257 aa7.92□□□□□ -1.14
TCF4-248ENST00000616053 KRTAP10-3P60369 221 aa7.92□□□□□ -1.14
TCF4-248ENST00000616053 DMBT1Q9UGM3 2413 aaPredicted RBP7.91□□□□□ -1.14
TCF4-248ENST00000616053 UTRNP46939 3433 aa7.91□□□□□ -1.14
TCF4-248ENST00000616053 REV3LO60673 3130 aa7.91□□□□□ -1.14
TCF4-248ENST00000616053 SMCPP49901 116 aaPredicted RBP7.88□□□□□ -1.15
TCF4-248ENST00000616053 LCE6AA0A183 80 aa7.87□□□□□ -1.15
TCF4-248ENST00000616053 C20orf166-AS1Q96NR2 134 aa7.87□□□□□ -1.15
TCF4-248ENST00000616053 Q8N9P0 234 aaPredicted RBP7.87□□□□□ -1.15
TCF4-248ENST00000616053 ADM2Q7Z4H4 148 aa7.86□□□□□ -1.15
TCF4-248ENST00000616053 GIG44P09565 113 aaPredicted RBP7.85□□□□□ -1.15
TCF4-248ENST00000616053 KLKP1Q107X0 134 aa7.84□□□□□ -1.15
TCF4-248ENST00000616053 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
TCF4-248ENST00000616053 COL4A2P08572 1712 aa7.83□□□□□ -1.16
TCF4-248ENST00000616053 DNAH12Q6ZR08 3092 aa7.82□□□□□ -1.16
TCF4-248ENST00000616053 ROMO1P60602 79 aa7.8□□□□□ -1.16
TCF4-248ENST00000616053 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
TCF4-248ENST00000616053 FP248Q71RG6 208 aaPredicted RBP7.78□□□□□ -1.16
TCF4-248ENST00000616053 CENPEQ02224 2701 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms