RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 KRTAP10-11P60412 298 aa5.78□□□□□ -1.48
LIG4-204ENST00000611712 PRYO14603 147 aa5.77□□□□□ -1.48
LIG4-204ENST00000611712 PKIGQ9Y2B9 76 aa5.77□□□□□ -1.48
LIG4-204ENST00000611712 REG3GQ6UW15 175 aa5.77□□□□□ -1.49
LIG4-204ENST00000611712 C15orf56Q8N910 161 aa5.77□□□□□ -1.49
LIG4-204ENST00000611712 FAM30AQ9NZY2 134 aa5.77□□□□□ -1.49
LIG4-204ENST00000611712 B9D2Q9BPU9 175 aa5.76□□□□□ -1.49
LIG4-204ENST00000611712 Q8NDZ9 215 aa5.76□□□□□ -1.49
LIG4-204ENST00000611712 WFDC13Q8IUB5 93 aa5.75□□□□□ -1.49
LIG4-204ENST00000611712 LINC00528Q8N1L1 170 aa5.75□□□□□ -1.49
LIG4-204ENST00000611712 H0Y9J4 135 aa5.75□□□□□ -1.49
LIG4-204ENST00000611712 NDUFB1O75438 58 aa5.75□□□□□ -1.49
LIG4-204ENST00000611712 LINC00588Q9Y4M8 146 aa5.75□□□□□ -1.49
LIG4-204ENST00000611712 SERTAD4-AS1Q5TG53 156 aa5.75□□□□□ -1.49
LIG4-204ENST00000611712 M0R2N4 97 aa5.74□□□□□ -1.49
LIG4-204ENST00000611712 TMEM254Q8TBM7 123 aa5.74□□□□□ -1.49
LIG4-204ENST00000611712 PRLHP81277 87 aa5.74□□□□□ -1.49
LIG4-204ENST00000611712 DNAH10OSP0CZ25 163 aa5.74□□□□□ -1.49
LIG4-204ENST00000611712 C5orf47Q569G3 176 aa5.74□□□□□ -1.49
LIG4-204ENST00000611712 Q6ZRX8 168 aa5.74□□□□□ -1.49
LIG4-204ENST00000611712 BSNQ9UPA5 3926 aa5.73□□□□□ -1.49
LIG4-204ENST00000611712 NDUFS5O43920 106 aa5.73□□□□□ -1.49
LIG4-204ENST00000611712 MPLKIPQ8TAP9 179 aa5.73□□□□□ -1.49
LIG4-204ENST00000611712 STAB1Q9NY15 2570 aa5.73□□□□□ -1.49
LIG4-204ENST00000611712 FAM168BA1KXE4 195 aa5.73□□□□□ -1.49
LIG4-204ENST00000611712 BCE1O60756 84 aa5.73□□□□□ -1.49
LIG4-204ENST00000611712 SERP1Q9Y6X1 66 aa5.73□□□□□ -1.49
LIG4-204ENST00000611712 HRCT1Q6UXD1 115 aa5.73□□□□□ -1.49
LIG4-204ENST00000611712 ST20-AS1Q8NBB2 130 aa5.73□□□□□ -1.49
LIG4-204ENST00000611712 TM2D3Q9BRN9 247 aa5.72□□□□□ -1.49
LIG4-204ENST00000611712 TRBV7-4A0A0J9YYF1 115 aa5.72□□□□□ -1.49
LIG4-204ENST00000611712 ATP5EP56381 51 aaPredicted RBP5.72□□□□□ -1.49
LIG4-204ENST00000611712 DEFB116Q30KQ4 102 aa5.72□□□□□ -1.49
LIG4-204ENST00000611712 COL6A5A8TX70 2615 aa5.72□□□□□ -1.49
LIG4-204ENST00000611712 KCNQ1DNQ9H478 68 aa5.72□□□□□ -1.49
LIG4-204ENST00000611712 RPS28P62857 69 aaKnown RBP5.71□□□□□ -1.49
LIG4-204ENST00000611712 A0A087WSZ3 146 aa5.71□□□□□ -1.5
LIG4-204ENST00000611712 PRR4Q16378 134 aa5.71□□□□□ -1.5
LIG4-204ENST00000611712 SMIM26A0A096LP01 95 aa5.7□□□□□ -1.5
LIG4-204ENST00000611712 Q9BRP9 147 aa5.7□□□□□ -1.5
LIG4-204ENST00000611712 Q8NBF4 154 aa5.69□□□□□ -1.5
LIG4-204ENST00000611712 SMIM29Q86T20 159 aa5.69□□□□□ -1.5
LIG4-204ENST00000611712 Q8N377 158 aa5.69□□□□□ -1.5
LIG4-204ENST00000611712 IGLV1-50A0A075B6I6 118 aa5.68□□□□□ -1.5
LIG4-204ENST00000611712 BRK1Q8WUW1 75 aa5.68□□□□□ -1.5
LIG4-204ENST00000611712 CASC10Q5T4H9 136 aa5.67□□□□□ -1.5
LIG4-204ENST00000611712 NSD1Q96L73 2696 aaPredicted RBP5.67□□□□□ -1.5
LIG4-204ENST00000611712 IGLV9-49A0A0B4J1Y8 123 aa5.67□□□□□ -1.5
LIG4-204ENST00000611712 WIPF1O43516 503 aa5.67□□□□□ -1.5
LIG4-204ENST00000611712 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
LIG4-204ENST00000611712 LINC00476Q8WZB0 136 aa5.66□□□□□ -1.5
LIG4-204ENST00000611712 LINC00474Q9P2X8 69 aa5.66□□□□□ -1.5
LIG4-204ENST00000611712 HIVEP1P15822 2718 aa5.66□□□□□ -1.5
LIG4-204ENST00000611712 NIPBLQ6KC79 2804 aaeCLIP5.66□□□□□ -1.5
LIG4-204ENST00000611712 A0A1B0GW54 56 aa5.65□□□□□ -1.5
LIG4-204ENST00000611712 LRCOL1A6NCL2 159 aa5.65□□□□□ -1.51
LIG4-204ENST00000611712 HCG22E2RYF7 251 aa5.65□□□□□ -1.51
LIG4-204ENST00000611712 LINC00208Q96KT6 92 aa5.65□□□□□ -1.51
LIG4-204ENST00000611712 TLX1NBP0CAT3 122 aa5.64□□□□□ -1.51
LIG4-204ENST00000611712 C4orf26Q17RF5 130 aa5.64□□□□□ -1.51
LIG4-204ENST00000611712 NBEAL1Q6ZS30 2694 aa5.64□□□□□ -1.51
LIG4-204ENST00000611712 C16orf90A8MZG2 172 aa5.64□□□□□ -1.51
LIG4-204ENST00000611712 K7EIL1 84 aa5.64□□□□□ -1.51
LIG4-204ENST00000611712 CHTF8P0CG12 524 aa5.64□□□□□ -1.51
LIG4-204ENST00000611712 PHF5AQ7RTV0 110 aaKnown RBP5.64□□□□□ -1.51
LIG4-204ENST00000611712 CYSTM1Q9H1C7 97 aa5.63□□□□□ -1.51
LIG4-204ENST00000611712 KLKP1Q107X0 134 aa5.63□□□□□ -1.51
LIG4-204ENST00000611712 NUPR2A6NF83 97 aa5.62□□□□□ -1.51
LIG4-204ENST00000611712 H7BZZ5 65 aa5.62□□□□□ -1.51
LIG4-204ENST00000611712 ERC2-IT1O76042 136 aa5.62□□□□□ -1.51
LIG4-204ENST00000611712 IGKV4-1P06312 121 aa5.62□□□□□ -1.51
LIG4-204ENST00000611712 CASC2Q6XLA1 102 aa5.62□□□□□ -1.51
LIG4-204ENST00000611712 PLA2G2DQ9UNK4 145 aa5.62□□□□□ -1.51
LIG4-204ENST00000611712 A0A0G2JQZ4 141 aa5.62□□□□□ -1.51
LIG4-204ENST00000611712 A0A1W2PNN7 141 aa5.62□□□□□ -1.51
LIG4-204ENST00000611712 CUBNO60494 3623 aa5.62□□□□□ -1.51
LIG4-204ENST00000611712 A0A1W2PNM2 257 aa5.61□□□□□ -1.51
LIG4-204ENST00000611712 KRTAP26-1Q6PEX3 210 aa5.61□□□□□ -1.51
LIG4-204ENST00000611712 EPM2AB3EWF7 344 aa5.6□□□□□ -1.51
LIG4-204ENST00000611712 K7EQZ3 153 aa5.6□□□□□ -1.51
LIG4-204ENST00000611712 SPINK6Q6UWN8 80 aa5.6□□□□□ -1.51
LIG4-204ENST00000611712 IGLV5-48A0A075B6I7 105 aa5.59□□□□□ -1.51
LIG4-204ENST00000611712 MDFIQ99750 246 aa5.59□□□□□ -1.51
LIG4-204ENST00000611712 ZNF706Q9Y5V0 76 aaPredicted RBP5.59□□□□□ -1.51
LIG4-204ENST00000611712 A0A0U1RQV1 116 aa5.59□□□□□ -1.51
LIG4-204ENST00000611712 RPL37AP61513 92 aaKnown RBP5.58□□□□□ -1.52
LIG4-204ENST00000611712 IGFL1Q6UW32 110 aa5.58□□□□□ -1.52
LIG4-204ENST00000611712 H0Y9P7 68 aa5.58□□□□□ -1.52
LIG4-204ENST00000611712 BAHCC1Q9P281 2608 aa5.58□□□□□ -1.52
LIG4-204ENST00000611712 CSMD2Q7Z408 3487 aa5.57□□□□□ -1.52
LIG4-204ENST00000611712 IGLV5-37A0A075B6J1 123 aa5.56□□□□□ -1.52
LIG4-204ENST00000611712 NBDYA0A0U1RRE5 68 aa5.56□□□□□ -1.52
LIG4-204ENST00000611712 IGHV6-1A0A0B4J1U7 121 aa5.56□□□□□ -1.52
LIG4-204ENST00000611712 LY6G6CO95867 125 aa5.56□□□□□ -1.52
LIG4-204ENST00000611712 TENM4Q6N022 2769 aa5.53□□□□□ -1.52
LIG4-204ENST00000611712 IGLV5-52A0A0A0MRZ9 124 aa5.53□□□□□ -1.52
LIG4-204ENST00000611712 PCOTHQ58A44 107 aa5.53□□□□□ -1.52
LIG4-204ENST00000611712 PSPHP1O15172 72 aa5.53□□□□□ -1.52
LIG4-204ENST00000611712 C1orf64Q8NEQ6 169 aa5.53□□□□□ -1.52
LIG4-204ENST00000611712 V9GYY9 64 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms