RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 PPDPFQ9H3Y8 114 aa11.32□□□□□ -0.6
SRSF4-206ENST00000605204 ANKRD39Q53RE8 183 aa11.31□□□□□ -0.6
SRSF4-206ENST00000605204 Q6ZVH6 145 aa11.31□□□□□ -0.6
SRSF4-206ENST00000605204 SPRR4Q96PI1 79 aa11.31□□□□□ -0.6
SRSF4-206ENST00000605204 SPANXDQ9BXN6 97 aa11.31□□□□□ -0.6
SRSF4-206ENST00000605204 ANAPC11Q9NYG5 84 aa11.31□□□□□ -0.6
SRSF4-206ENST00000605204 B5MCH6 92 aa11.3□□□□□ -0.6
SRSF4-206ENST00000605204 EIF4EBP3O60516 100 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-206ENST00000605204 CTAG1AP78358 180 aa11.3□□□□□ -0.6
SRSF4-206ENST00000605204 JOSD1Q15040 202 aaPredicted RBP11.3□□□□□ -0.6
SRSF4-206ENST00000605204 Q6ZRX8 168 aa11.3□□□□□ -0.6
SRSF4-206ENST00000605204 LINC00518Q8N0U6 118 aa11.3□□□□□ -0.6
SRSF4-206ENST00000605204 ATOH7Q8N100 152 aa11.3□□□□□ -0.6
SRSF4-206ENST00000605204 TTTY13Q9BZ97 58 aa11.3□□□□□ -0.6
SRSF4-206ENST00000605204 KRTAP13-2Q52LG2 175 aa11.29□□□□□ -0.6
SRSF4-206ENST00000605204 HSBP1L1C9JCN9 74 aa11.28□□□□□ -0.6
SRSF4-206ENST00000605204 IFITM1P13164 125 aa11.28□□□□□ -0.6
SRSF4-206ENST00000605204 HINT1P49773 126 aaPredicted RBP11.28□□□□□ -0.6
SRSF4-206ENST00000605204 ZNF73O43830 326 aaPredicted RBP11.28□□□□□ -0.6
SRSF4-206ENST00000605204 SMCR5Q8TEV8 140 aa11.28□□□□□ -0.6
SRSF4-206ENST00000605204 LINC00304Q8N9R0 145 aa11.26□□□□□ -0.61
SRSF4-206ENST00000605204 PCP2Q8IVA1 136 aa11.24□□□□□ -0.61
SRSF4-206ENST00000605204 OR13C6PQ8NH95 151 aa11.24□□□□□ -0.61
SRSF4-206ENST00000605204 C5orf52A6NGY3 159 aa11.23□□□□□ -0.61
SRSF4-206ENST00000605204 LINC00483Q53H64 154 aa11.23□□□□□ -0.61
SRSF4-206ENST00000605204 Q9BRP9 147 aa11.22□□□□□ -0.61
SRSF4-206ENST00000605204 SPAG11AQ6PDA7 123 aa11.21□□□□□ -0.61
SRSF4-206ENST00000605204 TSPAN13O95857 204 aa11.2□□□□□ -0.62
SRSF4-206ENST00000605204 C3orf22Q8N5N4 141 aa11.18□□□□□ -0.62
SRSF4-206ENST00000605204 PRR4Q16378 134 aa11.17□□□□□ -0.62
SRSF4-206ENST00000605204 GAGE2AQ6NT46 116 aa11.17□□□□□ -0.62
SRSF4-206ENST00000605204 DHRS4-AS1Q9P1J3 65 aa11.17□□□□□ -0.62
SRSF4-206ENST00000605204 ERC2-IT1O76042 136 aa11.16□□□□□ -0.62
SRSF4-206ENST00000605204 SCGB1D1O95968 90 aa11.16□□□□□ -0.62
SRSF4-206ENST00000605204 TRBV7-6A0A0J9YX20 115 aa11.15□□□□□ -0.63
SRSF4-206ENST00000605204 MUSTN1Q8IVN3 82 aa11.15□□□□□ -0.63
SRSF4-206ENST00000605204 TRAV13-2A0A0B4J235 113 aa11.14□□□□□ -0.63
SRSF4-206ENST00000605204 C4orf48Q5BLP8 95 aa11.14□□□□□ -0.63
SRSF4-206ENST00000605204 ELOF1P60002 83 aaKnown RBP11.13□□□□□ -0.63
SRSF4-206ENST00000605204 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
SRSF4-206ENST00000605204 A6NDN8 102 aa11.12□□□□□ -0.63
SRSF4-206ENST00000605204 COX7BP24311 80 aa11.12□□□□□ -0.63
SRSF4-206ENST00000605204 SLC25A34Q6PIV7 304 aa11.11□□□□□ -0.63
SRSF4-206ENST00000605204 SSBP3-AS1Q7Z2R9 100 aa11.11□□□□□ -0.63
SRSF4-206ENST00000605204 MUC2Q02817 5179 aa11.1□□□□□ -0.63
SRSF4-206ENST00000605204 Q8NBF4 154 aa11.1□□□□□ -0.63
SRSF4-206ENST00000605204 A0A1B0GWB2 263 aa11.09□□□□□ -0.63
SRSF4-206ENST00000605204 A4D1N5 150 aa11.09□□□□□ -0.63
SRSF4-206ENST00000605204 SPINK1P00995 79 aa11.08□□□□□ -0.64
SRSF4-206ENST00000605204 IGLV9-49A0A0B4J1Y8 123 aa11.07□□□□□ -0.64
SRSF4-206ENST00000605204 DLEU1O43261 78 aa11.07□□□□□ -0.64
SRSF4-206ENST00000605204 COX8AP10176 69 aa11.07□□□□□ -0.64
SRSF4-206ENST00000605204 SPRR1BP22528 89 aa11.07□□□□□ -0.64
SRSF4-206ENST00000605204 MOBPQ13875 183 aa11.07□□□□□ -0.64
SRSF4-206ENST00000605204 RPS29P62273 56 aaKnown RBP11.05□□□□□ -0.64
SRSF4-206ENST00000605204 ST20-AS1Q8NBB2 130 aa11.04□□□□□ -0.64
SRSF4-206ENST00000605204 NHP2Q9NX24 153 aaKnown RBP11.04□□□□□ -0.64
SRSF4-206ENST00000605204 C9orf153Q5TBE3 101 aa11.03□□□□□ -0.64
SRSF4-206ENST00000605204 FP248Q71RG6 208 aaPredicted RBP11.02□□□□□ -0.65
SRSF4-206ENST00000605204 HIST1H4GQ99525 98 aa11.02□□□□□ -0.65
SRSF4-206ENST00000605204 SMIM11BQ8TCY0 68 aa11.01□□□□□ -0.65
SRSF4-206ENST00000605204 RETNLBQ9BQ08 111 aa11.01□□□□□ -0.65
SRSF4-206ENST00000605204 VAMP8Q9BV40 100 aa11.01□□□□□ -0.65
SRSF4-206ENST00000605204 LAMTOR3Q9UHA4 124 aa11.01□□□□□ -0.65
SRSF4-206ENST00000605204 VAMP3Q15836 100 aa11□□□□□ -0.65
SRSF4-206ENST00000605204 TAL2Q16559 108 aa10.99□□□□□ -0.65
SRSF4-206ENST00000605204 PAM16Q9Y3D7 125 aa10.99□□□□□ -0.65
SRSF4-206ENST00000605204 IGLV7-46A0A075B6I9 117 aa10.98□□□□□ -0.65
SRSF4-206ENST00000605204 TEX49A0A1B0GTD5 131 aa10.98□□□□□ -0.65
SRSF4-206ENST00000605204 TPRXLQ17RH7 258 aa10.98□□□□□ -0.65
SRSF4-206ENST00000605204 SPATA45Q537H7 98 aa10.98□□□□□ -0.65
SRSF4-206ENST00000605204 SLC25A20O43772 301 aa10.97□□□□□ -0.65
SRSF4-206ENST00000605204 HIGD1BQ9P298 99 aa10.97□□□□□ -0.65
SRSF4-206ENST00000605204 IGLV5-48A0A075B6I7 105 aa10.95□□□□□ -0.66
SRSF4-206ENST00000605204 C14orf144Q96I85 54 aa10.94□□□□□ -0.66
SRSF4-206ENST00000605204 DEFB105AQ8NG35 78 aa10.92□□□□□ -0.66
SRSF4-206ENST00000605204 FAT4Q6V0I7 4981 aa10.91□□□□□ -0.66
SRSF4-206ENST00000605204 BVES-AS1Q5T3Y7 98 aa10.9□□□□□ -0.66
SRSF4-206ENST00000605204 Q8N377 158 aa10.9□□□□□ -0.66
SRSF4-206ENST00000605204 LIMD2Q9BT23 127 aa10.9□□□□□ -0.67
SRSF4-206ENST00000605204 CDIP1Q9H305 208 aa10.9□□□□□ -0.67
SRSF4-206ENST00000605204 LINC00575Q6W349 94 aa10.89□□□□□ -0.67
SRSF4-206ENST00000605204 PRO1933Q9H354 126 aa10.89□□□□□ -0.67
SRSF4-206ENST00000605204 LINC01547P58512 204 aaPredicted RBP10.88□□□□□ -0.67
SRSF4-206ENST00000605204 CD164Q04900 197 aa10.88□□□□□ -0.67
SRSF4-206ENST00000605204 Q1RN00 199 aa10.88□□□□□ -0.67
SRSF4-206ENST00000605204 C12orf57Q99622 126 aa10.88□□□□□ -0.67
SRSF4-206ENST00000605204 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
SRSF4-206ENST00000605204 TMEM238LA0A1B0GVL6 79 aa10.87□□□□□ -0.67
SRSF4-206ENST00000605204 A6NJY4 79 aa10.87□□□□□ -0.67
SRSF4-206ENST00000605204 C2orf91Q6ZV80 131 aa10.87□□□□□ -0.67
SRSF4-206ENST00000605204 hADV29S1A0JD25 119 aa10.86□□□□□ -0.67
SRSF4-206ENST00000605204 RAB37Q96AX2 223 aa10.86□□□□□ -0.67
SRSF4-206ENST00000605204 SMIM29Q86T20 159 aa10.85□□□□□ -0.67
SRSF4-206ENST00000605204 CFC1BP0CG36 223 aa10.84□□□□□ -0.67
SRSF4-206ENST00000605204 CFC1P0CG37 223 aa10.84□□□□□ -0.67
SRSF4-206ENST00000605204 PYY3Q5JQD4 70 aa10.84□□□□□ -0.67
SRSF4-206ENST00000605204 KRTAP9-2Q9BYQ4 174 aa10.83□□□□□ -0.68
SRSF4-206ENST00000605204 TMA7Q9Y2S6 64 aaKnown RBP10.83□□□□□ -0.68
SRSF4-206ENST00000605204 F8WEM9 126 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms